RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 TESQ9UGI8 421 aaKnown RBP6.23□□□□□ -1.41
VPS13B-202ENST00000357162 GPR45Q9Y5Y3 372 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 DOCK2Q92608 1830 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 TLE4Q04727 773 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 SLAMF9Q96A28 289 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 NOX1Q9Y5S8 564 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 LY6KQ17RY6 165 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 CARD16Q5EG05 197 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 TMUB2Q71RG4 321 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 GALNTL5Q7Z4T8 443 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 GLB1L2Q8IW92 636 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 CDRT4Q8N9R6 151 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 LMF2Q9BU23 707 aaKnown RBP6.23□□□□□ -1.41
VPS13B-202ENST00000357162 CHIAQ9BZP6 476 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 PRMT8Q9NR22 394 aaPredicted RBP6.23□□□□□ -1.41
VPS13B-202ENST00000357162 NDUFB11Q9NX14 153 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 B4GALT7Q9UBV7 327 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 RNF24Q9Y225 148 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 CORO1AP31146 461 aaKnown RBP6.23□□□□□ -1.41
VPS13B-202ENST00000357162 CASRP41180 1078 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 MASP1P48740 699 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 LRP10Q7Z4F1 713 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 KIAA1958Q8N8K9 716 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 MTFMTQ96DP5 389 aaKnown RBP6.23□□□□□ -1.41
VPS13B-202ENST00000357162 C1QTNF2Q9BXJ5 285 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 TNKS2Q9H2K2 1166 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 DNMT3AQ9Y6K1 912 aaPredicted RBP6.23□□□□□ -1.41
VPS13B-202ENST00000357162 PDHXO00330 501 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 SGCEO43556 437 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 VNN1O95497 513 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 PDHA2P29803 388 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 SLC1A3P43003 542 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 DCAF7P61962 342 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 SIRPB2Q5JXA9 342 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 PM20D1Q6GTS8 502 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 SMIM15Q7Z3B0 74 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 ISCA2Q86U28 154 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 OR4K5Q8NGD3 323 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 OR4K14Q8NGD5 310 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 OR8K3Q8NH51 312 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 TMEM163Q8TC26 289 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 C1QTNF3Q9BXJ4 246 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 TMPRSS4Q9NRS4 437 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 NME4O00746 187 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 RAD1O60671 282 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 C6orf47O95873 294 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 IMPA1P29218 277 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 VIPR1P32241 457 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 SERPINF1P36955 418 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 PDGFRLQ15198 375 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 SF3B4Q15427 424 aaKnown RBP eCLIP6.23□□□□□ -1.41
VPS13B-202ENST00000357162 EEF1DP3Q658K8 133 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 KDM8Q8N371 416 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 CMSS1Q9BQ75 279 aaKnown RBP6.23□□□□□ -1.41
VPS13B-202ENST00000357162 HHLA2Q9UM44 414 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 DYSFO75923 2080 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 C4AP0C0L4 1744 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 C4BP0C0L5 1744 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 ARL5CA6NH57 179 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 ZNF878C9JN71 531 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 VILLO15195 856 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 CSF2P04141 144 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 GANABQ14697 944 aaKnown RBP6.23□□□□□ -1.41
VPS13B-202ENST00000357162 C19orf35Q6ZS72 473 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 SYT13Q7L8C5 426 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 SLC29A4Q7RTT9 530 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 FAM185AQ8N0U4 392 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 OR56B1Q8NGI3 324 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 PPP1R35Q8TAP8 253 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.23□□□□□ -1.419e-7■■■■□ 26.6
VPS13B-202ENST00000357162 UTP4Q969X6 686 aaKnown RBP6.23□□□□□ -1.41
VPS13B-202ENST00000357162 MARC2Q969Z3 335 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 TMEM68Q96MH6 324 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 HLA-AP01891 365 aaKnown RBP6.22□□□□□ -1.41
VPS13B-202ENST00000357162 MLIPQ5VWP3 458 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 DOK1Q99704 481 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 BABAM2Q9NXR7 383 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 NDOR1Q9UHB4 597 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 ENTPD2Q9Y5L3 495 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 MT-ND4LP03901 98 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 AMY2AP04746 511 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 OR8U9P0C7N5 309 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 SOWAHAQ2M3V2 549 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 OR4M1Q8NGD0 313 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 TRAPPC4Q9Y296 219 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 PCDHA9Q9Y5H5 950 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 ANK1P16157 1881 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 IFNGR1P15260 489 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 GPR17Q13304 367 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 CTU2Q2VPK5 515 aaKnown RBP6.22□□□□□ -1.41
VPS13B-202ENST00000357162 KIAA0319Q5VV43 1072 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 TMEM220Q6QAJ8 160 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 KANSL1Q7Z3B3 1105 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 OR1M1Q8NGA1 313 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 ALOXE3Q9BYJ1 711 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 LIN28AQ9H9Z2 209 aaKnown RBP6.22□□□□□ -1.41
VPS13B-202ENST00000357162 APOBEC3GQ9HC16 384 aaKnown RBP6.22□□□□□ -1.41
VPS13B-202ENST00000357162 C13orf42A0A1B0GVH6 325 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 J3QLW9 94 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 CACNG3O60359 315 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms