RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 POLEQ07864 2286 aa3.69□□□□□ -1.82
LIG4-201ENST00000356922 SHISA8B8ZZ34 492 aa3.69□□□□□ -1.82
LIG4-201ENST00000356922 M0QX08 132 aa3.69□□□□□ -1.82
LIG4-201ENST00000356922 EBAG9O00559 213 aa3.69□□□□□ -1.82
LIG4-201ENST00000356922 ALOX5P09917 674 aa3.69□□□□□ -1.82
LIG4-201ENST00000356922 FBXO45P0C2W1 286 aa3.69□□□□□ -1.82
LIG4-201ENST00000356922 ICAM2P13598 275 aa3.69□□□□□ -1.82
LIG4-201ENST00000356922 HPGDP15428 266 aa3.69□□□□□ -1.82
LIG4-201ENST00000356922 ATP6V1B2P21281 511 aa3.69□□□□□ -1.82
LIG4-201ENST00000356922 MST1P26927 711 aa3.69□□□□□ -1.82
LIG4-201ENST00000356922 TRHRP34981 398 aaPredicted RBP3.69□□□□□ -1.82
LIG4-201ENST00000356922 OR1E2P47887 323 aa3.69□□□□□ -1.82
LIG4-201ENST00000356922 TNFSF10P50591 281 aa3.69□□□□□ -1.82
LIG4-201ENST00000356922 FOXO1Q12778 655 aa3.69□□□□□ -1.82
LIG4-201ENST00000356922 ZNHIT3Q15649 155 aaPredicted RBP3.69□□□□□ -1.82
LIG4-201ENST00000356922 VMACQ2NL98 169 aa3.69□□□□□ -1.82
LIG4-201ENST00000356922 ARHGAP11BQ3KRB8 267 aa3.69□□□□□ -1.82
LIG4-201ENST00000356922 KLHL26Q53HC5 615 aa3.69□□□□□ -1.82
LIG4-201ENST00000356922 PRR30Q53SZ7 412 aaPredicted RBP3.69□□□□□ -1.82
LIG4-201ENST00000356922 PDZK1Q5T2W1 519 aa3.69□□□□□ -1.82
LIG4-201ENST00000356922 BORAQ6PGQ7 559 aa3.69□□□□□ -1.82
LIG4-201ENST00000356922 NET1Q7Z628 596 aaPredicted RBP3.69□□□□□ -1.82
LIG4-201ENST00000356922 VTCN1Q7Z7D3 282 aa3.69□□□□□ -1.82
LIG4-201ENST00000356922 PTRH1Q86Y79 214 aaKnown RBP3.69□□□□□ -1.82
LIG4-201ENST00000356922 NATD1Q8N6N6 113 aa3.69□□□□□ -1.82
LIG4-201ENST00000356922 ZNF614Q8N883 585 aa3.69□□□□□ -1.82
LIG4-201ENST00000356922 Q8NA96 180 aa3.69□□□□□ -1.82
LIG4-201ENST00000356922 FAM13CQ8NE31 585 aa3.69□□□□□ -1.82
LIG4-201ENST00000356922 CHDHQ8NE62 594 aaPredicted RBP3.69□□□□□ -1.82
LIG4-201ENST00000356922 DUSP19Q8WTR2 217 aa3.69□□□□□ -1.82
LIG4-201ENST00000356922 TP53INP1Q96A56 240 aa3.69□□□□□ -1.82
LIG4-201ENST00000356922 HOPXQ9BPY8 73 aaPredicted RBP3.69□□□□□ -1.82
LIG4-201ENST00000356922 ECSITQ9BQ95 431 aa3.69□□□□□ -1.82
LIG4-201ENST00000356922 PELOQ9BRX2 385 aaKnown RBP3.69□□□□□ -1.82
LIG4-201ENST00000356922 BTBD2Q9BX70 525 aa3.69□□□□□ -1.82
LIG4-201ENST00000356922 SAP130Q9H0E3 1048 aa3.69□□□□□ -1.82
LIG4-201ENST00000356922 C1orf21Q9H246 121 aa3.69□□□□□ -1.82
LIG4-201ENST00000356922 SPAG4Q9NPE6 437 aa3.69□□□□□ -1.82
LIG4-201ENST00000356922 LRFN1Q9P244 771 aa3.69□□□□□ -1.82
LIG4-201ENST00000356922 TEKT2Q9UIF3 430 aa3.69□□□□□ -1.82
LIG4-201ENST00000356922 FBXL2Q9UKC9 423 aa3.69□□□□□ -1.82
LIG4-201ENST00000356922 MAPRE3Q9UPY8 281 aa3.69□□□□□ -1.82
LIG4-201ENST00000356922 YARS2Q9Y2Z4 477 aaKnown RBP3.69□□□□□ -1.82
LIG4-201ENST00000356922 DSPPQ9NZW4 1301 aa3.69□□□□□ -1.82
LIG4-201ENST00000356922 HAX1O00165 279 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 GYG2O15488 501 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 SLC28A2O43868 658 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 PPM1BO75688 479 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 MFN2O95140 757 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 UTS2O95399 124 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 OXSR1O95747 527 aaPredicted RBP3.68□□□□□ -1.82
LIG4-201ENST00000356922 IL33O95760 270 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 NPPAP01160 153 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 MT-ND1P03886 318 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 PRB1P04280 392 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 GKN3PP0CG01 181 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 ARAFP10398 606 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 IRX1P78414 480 aaPredicted RBP3.68□□□□□ -1.82
LIG4-201ENST00000356922 CDK6Q00534 326 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 PLCXD2Q0VAA5 305 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 MAPRE2Q15555 327 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 OR1C1Q15619 314 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 FXNQ16595 210 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 NTRK2Q16620 822 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 GPAT3Q53EU6 434 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 LACTB2Q53H82 288 aaPredicted RBP3.68□□□□□ -1.82
LIG4-201ENST00000356922 ISLR2Q6UXK2 745 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 GALNTL5Q7Z4T8 443 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 SERPINA11Q86U17 422 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 SPPL2CQ8IUH8 684 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 TMEM156Q8N614 296 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 TRIML2Q8N7C3 387 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 POGLUT1Q8NBL1 392 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 MDS2Q8NDY4 140 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 C17orf47Q8NEP4 570 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 OR2T12Q8NG77 320 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 RNF138Q8WVD3 245 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 CNOT9Q92600 299 aaKnown RBP3.68□□□□□ -1.82
LIG4-201ENST00000356922 HAS2Q92819 552 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 SPACA9Q96E40 222 aaPredicted RBP3.68□□□□□ -1.82
LIG4-201ENST00000356922 STACQ99469 402 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 TSPAN10Q9H1Z9 355 aaPredicted RBP3.68□□□□□ -1.82
LIG4-201ENST00000356922 TMEM38AQ9H6F2 299 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 GID8Q9NWU2 228 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 ABI3Q9P2A4 366 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 PRODH2Q9UF12 536 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 CNOT11Q9UKZ1 510 aaKnown RBP3.68□□□□□ -1.82
LIG4-201ENST00000356922 V9GYQ6 96 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 AGAP5A6NIR3 686 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 OR6C76A6NM76 312 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 EFNA2O43921 213 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 THY1P04216 161 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 NR2F1P10589 423 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 PTNP21246 168 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 TCEA1P23193 301 aaKnown RBP3.68□□□□□ -1.82
LIG4-201ENST00000356922 PRIM2P49643 509 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 POU6F2P78424 691 aaPredicted RBP3.68□□□□□ -1.82
LIG4-201ENST00000356922 HPCAP84074 193 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 FOXD4Q12950 439 aaPredicted RBP3.68□□□□□ -1.82
LIG4-201ENST00000356922 SCARB2Q14108 478 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms