RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 EPYCQ99645 322 aa16.75■□□□□ 0.27
SMARCD3-202ENST00000356800 OSBPL10Q9BXB5 764 aa16.75■□□□□ 0.27
SMARCD3-202ENST00000356800 Q9H521 79 aa16.75■□□□□ 0.27
SMARCD3-202ENST00000356800 LIN28AQ9H9Z2 209 aaKnown RBP16.75■□□□□ 0.27
SMARCD3-202ENST00000356800 USE1Q9NZ43 259 aa16.75■□□□□ 0.27
SMARCD3-202ENST00000356800 ZNF443Q9Y2A4 671 aaPredicted RBP16.75■□□□□ 0.27
SMARCD3-202ENST00000356800 ENPP4Q9Y6X5 453 aa16.75■□□□□ 0.27
SMARCD3-202ENST00000356800 TRBV11-1A0A0K0K1C0 115 aa16.75■□□□□ 0.27
SMARCD3-202ENST00000356800 LOC101059948A0A1B0GTJ6 334 aa16.75■□□□□ 0.27
SMARCD3-202ENST00000356800 A0A1W2PQ72 361 aa16.75■□□□□ 0.27
SMARCD3-202ENST00000356800 TMEM200CA6NKL6 621 aa16.75■□□□□ 0.27
SMARCD3-202ENST00000356800 NPIPB9F8W1W9 429 aa16.75■□□□□ 0.27
SMARCD3-202ENST00000356800 SYT5O00445 386 aa16.75■□□□□ 0.27
SMARCD3-202ENST00000356800 TO15178 435 aa16.75■□□□□ 0.27
SMARCD3-202ENST00000356800 ALPLP05186 524 aa16.75■□□□□ 0.27
SMARCD3-202ENST00000356800 RHCEP18577 417 aa16.75■□□□□ 0.27
SMARCD3-202ENST00000356800 FPR1P21462 350 aa16.75■□□□□ 0.27
SMARCD3-202ENST00000356800 PRKAR1BP31321 381 aa16.75■□□□□ 0.27
SMARCD3-202ENST00000356800 DLSTP36957 453 aa16.75■□□□□ 0.27
SMARCD3-202ENST00000356800 NR0B1P51843 470 aaKnown RBP16.75■□□□□ 0.27
SMARCD3-202ENST00000356800 ARHGDIAP52565 204 aa16.75■□□□□ 0.27
SMARCD3-202ENST00000356800 DAG1Q14118 895 aa16.75■□□□□ 0.27
SMARCD3-202ENST00000356800 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.75■□□□□ 0.27
SMARCD3-202ENST00000356800 RSPO4Q2I0M5 234 aaPredicted RBP16.75■□□□□ 0.27
SMARCD3-202ENST00000356800 NHSL2Q5HYW2 709 aa16.75■□□□□ 0.27
SMARCD3-202ENST00000356800 OTUD3Q5T2D3 398 aaPredicted RBP16.75■□□□□ 0.27
SMARCD3-202ENST00000356800 HLA-DQA1Q5Y7H0 255 aa16.75■□□□□ 0.27
SMARCD3-202ENST00000356800 HSDL2Q6YN16 418 aa16.75■□□□□ 0.27
SMARCD3-202ENST00000356800 ZNF836Q6ZNA1 936 aa16.75■□□□□ 0.27
SMARCD3-202ENST00000356800 TMEM179BQ7Z7N9 219 aa16.75■□□□□ 0.27
SMARCD3-202ENST00000356800 CARM1Q86X55 608 aa16.75■□□□□ 0.27
SMARCD3-202ENST00000356800 CLIP4Q8N3C7 705 aa16.75■□□□□ 0.27
SMARCD3-202ENST00000356800 G6PC3Q9BUM1 346 aa16.75■□□□□ 0.27
SMARCD3-202ENST00000356800 TRIM45Q9H8W5 580 aaPredicted RBP16.75■□□□□ 0.27
SMARCD3-202ENST00000356800 REEP1Q9H902 201 aa16.75■□□□□ 0.27
SMARCD3-202ENST00000356800 RLIMQ9NVW2 624 aa16.75■□□□□ 0.27
SMARCD3-202ENST00000356800 IFT52Q9Y366 437 aa16.75■□□□□ 0.27
SMARCD3-202ENST00000356800 U3KQV3 271 aa16.75■□□□□ 0.27
SMARCD3-202ENST00000356800 C21orf140B9A014 251 aa16.74■□□□□ 0.27
SMARCD3-202ENST00000356800 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.74■□□□□ 0.27
SMARCD3-202ENST00000356800 M0R3H8 397 aa16.74■□□□□ 0.27
SMARCD3-202ENST00000356800 PCDH17O14917 1159 aa16.74■□□□□ 0.27
SMARCD3-202ENST00000356800 SEMA7AO75326 666 aa16.74■□□□□ 0.27
SMARCD3-202ENST00000356800 IGHEP01854 428 aa16.74■□□□□ 0.27
SMARCD3-202ENST00000356800 DBIP07108 87 aaKnown RBP16.74■□□□□ 0.27
SMARCD3-202ENST00000356800 THBS1P07996 1170 aa16.74■□□□□ 0.27
SMARCD3-202ENST00000356800 YAP1P46937 504 aaKnown RBP16.74■□□□□ 0.27
SMARCD3-202ENST00000356800 RNF144AP50876 292 aaPredicted RBP16.74■□□□□ 0.27
SMARCD3-202ENST00000356800 RPS15P62841 145 aaKnown RBP16.74■□□□□ 0.27
SMARCD3-202ENST00000356800 EEF1A1P68104 462 aaKnown RBP16.74■□□□□ 0.27
SMARCD3-202ENST00000356800 PPP2R2BQ00005 443 aa16.74■□□□□ 0.27
SMARCD3-202ENST00000356800 GK3PQ14409 553 aa16.74■□□□□ 0.27
SMARCD3-202ENST00000356800 DECR1Q16698 335 aa16.74■□□□□ 0.27
SMARCD3-202ENST00000356800 C16orf47Q6ZP98 133 aaPredicted RBP16.74■□□□□ 0.27
SMARCD3-202ENST00000356800 PRR22Q8IZ63 422 aa16.74■□□□□ 0.27
SMARCD3-202ENST00000356800 C17orf47Q8NEP4 570 aa16.74■□□□□ 0.27
SMARCD3-202ENST00000356800 VANGL1Q8TAA9 524 aaPredicted RBP16.74■□□□□ 0.27
SMARCD3-202ENST00000356800 MAGEE2Q8TD90 523 aaPredicted RBP16.74■□□□□ 0.27
SMARCD3-202ENST00000356800 NKD1Q969G9 470 aa16.74■□□□□ 0.27
SMARCD3-202ENST00000356800 EFHD2Q96C19 240 aaPredicted RBP16.74■□□□□ 0.27
SMARCD3-202ENST00000356800 PIP5K1AQ99755 562 aa16.74■□□□□ 0.27
SMARCD3-202ENST00000356800 RBM4BQ9BQ04 359 aaKnown RBP16.74■□□□□ 0.27
SMARCD3-202ENST00000356800 RBM4Q9BWF3 364 aaKnown RBP16.74■□□□□ 0.27
SMARCD3-202ENST00000356800 GPR87Q9BY21 358 aa16.74■□□□□ 0.27
SMARCD3-202ENST00000356800 GABARAPL1Q9H0R8 117 aa16.74■□□□□ 0.27
SMARCD3-202ENST00000356800 SAMHD1Q9Y3Z3 626 aaKnown RBP16.74■□□□□ 0.27
SMARCD3-202ENST00000356800 FAM32AQ9Y421 112 aaKnown RBP16.74■□□□□ 0.27
SMARCD3-202ENST00000356800 PCDHGA10Q9Y5H3 936 aa16.74■□□□□ 0.27
SMARCD3-202ENST00000356800 MAGED1Q9Y5V3 778 aaPredicted RBP16.74■□□□□ 0.27
SMARCD3-202ENST00000356800 AP4B1Q9Y6B7 739 aa16.74■□□□□ 0.27
SMARCD3-202ENST00000356800 J3KTA2 159 aa16.73■□□□□ 0.27
SMARCD3-202ENST00000356800 IL33O95760 270 aa16.73■□□□□ 0.27
SMARCD3-202ENST00000356800 CELA2AP08217 269 aa16.73■□□□□ 0.27
SMARCD3-202ENST00000356800 IL7RP16871 459 aa16.73■□□□□ 0.27
SMARCD3-202ENST00000356800 RBMS1P29558 406 aaKnown RBP16.73■□□□□ 0.27
SMARCD3-202ENST00000356800 RRM2P31350 389 aa16.73■□□□□ 0.27
SMARCD3-202ENST00000356800 OTX2P32243 289 aa16.73■□□□□ 0.27
SMARCD3-202ENST00000356800 PLAURQ03405 335 aa16.73■□□□□ 0.27
SMARCD3-202ENST00000356800 PPP1R8Q12972 351 aaKnown RBP16.73■□□□□ 0.27
SMARCD3-202ENST00000356800 MED21Q13503 144 aa16.73■□□□□ 0.27
SMARCD3-202ENST00000356800 SSPNQ14714 243 aa16.73■□□□□ 0.27
SMARCD3-202ENST00000356800 IGF2-ASQ6U949 168 aa16.73■□□□□ 0.27
SMARCD3-202ENST00000356800 ZNF605Q86T29 641 aa16.73■□□□□ 0.27
SMARCD3-202ENST00000356800 OR8K3Q8NH51 312 aa16.73■□□□□ 0.27
SMARCD3-202ENST00000356800 ELP5Q8TE02 316 aa16.73■□□□□ 0.27
SMARCD3-202ENST00000356800 RDH12Q96NR8 316 aa16.73■□□□□ 0.27
SMARCD3-202ENST00000356800 ARHGDIGQ99819 225 aa16.73■□□□□ 0.27
SMARCD3-202ENST00000356800 SMPD3Q9NY59 655 aaPredicted RBP16.73■□□□□ 0.27
SMARCD3-202ENST00000356800 FLRT3Q9NZU0 649 aa16.73■□□□□ 0.27
SMARCD3-202ENST00000356800 KCND3Q9UK17 655 aa16.73■□□□□ 0.27
SMARCD3-202ENST00000356800 SLC9A8Q9Y2E8 581 aa16.73■□□□□ 0.27
SMARCD3-202ENST00000356800 FRS3O43559 492 aa16.72■□□□□ 0.27
SMARCD3-202ENST00000356800 ZNF354AO60765 605 aaPredicted RBP16.72■□□□□ 0.27
SMARCD3-202ENST00000356800 BCAS1O75363 584 aaPredicted RBP16.72■□□□□ 0.27
SMARCD3-202ENST00000356800 NID1P14543 1247 aa16.72■□□□□ 0.27
SMARCD3-202ENST00000356800 FUT4P22083 530 aa16.72■□□□□ 0.27
SMARCD3-202ENST00000356800 HMGA2P52926 109 aa16.72■□□□□ 0.27
SMARCD3-202ENST00000356800 IL10RAQ13651 578 aa16.72■□□□□ 0.27
SMARCD3-202ENST00000356800 LARS2Q15031 903 aaKnown RBP16.72■□□□□ 0.27
SMARCD3-202ENST00000356800 NPTX1Q15818 432 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms