RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 DDIT4Q9NX09 232 aa14.77□□□□□ -0.04
RTN3-205ENST00000356000 GDE1Q9NZC3 331 aa14.77□□□□□ -0.04
RTN3-205ENST00000356000 ZNF69Q9UC07 566 aa14.77□□□□□ -0.04
RTN3-205ENST00000356000 FZD4Q9ULV1 537 aa14.77□□□□□ -0.04
RTN3-205ENST00000356000 OR6C74A6NCV1 312 aa14.77□□□□□ -0.05
RTN3-205ENST00000356000 METTL21EPA6NDL7 271 aa14.77□□□□□ -0.05
RTN3-205ENST00000356000 NEDD8-MDP1E9PL57 170 aa14.77□□□□□ -0.05
RTN3-205ENST00000356000 MANBAO00462 879 aa14.77□□□□□ -0.05
RTN3-205ENST00000356000 SOX14O95416 240 aa14.77□□□□□ -0.05
RTN3-205ENST00000356000 IDSP22304 550 aa14.77□□□□□ -0.05
RTN3-205ENST00000356000 GALP22466 123 aa14.77□□□□□ -0.05
RTN3-205ENST00000356000 IL2P60568 153 aa14.77□□□□□ -0.05
RTN3-205ENST00000356000 IRF4Q15306 451 aa14.77□□□□□ -0.05
RTN3-205ENST00000356000 LBHQ53QV2 105 aaPredicted RBP14.77□□□□□ -0.05
RTN3-205ENST00000356000 SYT14P1Q58G82 188 aa14.77□□□□□ -0.05
RTN3-205ENST00000356000 CRB2Q5IJ48 1285 aa14.77□□□□□ -0.05
RTN3-205ENST00000356000 CCDC116Q8IYX3 515 aa14.77□□□□□ -0.05
RTN3-205ENST00000356000 HAVCR2Q8TDQ0 301 aa14.77□□□□□ -0.05
RTN3-205ENST00000356000 THAP4Q8WY91 577 aa14.77□□□□□ -0.05
RTN3-205ENST00000356000 LMAN2LQ9H0V9 348 aa14.77□□□□□ -0.05
RTN3-205ENST00000356000 WDCPQ9H6R7 721 aa14.77□□□□□ -0.05
RTN3-205ENST00000356000 AFF4Q9UHB7 1163 aaKnown RBP14.77□□□□□ -0.05
RTN3-205ENST00000356000 PCDHB11Q9Y5F2 797 aa14.77□□□□□ -0.05
RTN3-205ENST00000356000 PHIPQ8WWQ0 1821 aa14.76□□□□□ -0.05
RTN3-205ENST00000356000 CREBL2O60519 120 aaPredicted RBP14.76□□□□□ -0.05
RTN3-205ENST00000356000 RBBP9O75884 186 aa14.76□□□□□ -0.05
RTN3-205ENST00000356000 LRATO95237 230 aa14.76□□□□□ -0.05
RTN3-205ENST00000356000 ANXA7P20073 488 aaKnown RBP14.76□□□□□ -0.05
RTN3-205ENST00000356000 PITPNAQ00169 270 aa14.76□□□□□ -0.05
RTN3-205ENST00000356000 ELAVL2Q12926 359 aaKnown RBP14.76□□□□□ -0.05
RTN3-205ENST00000356000 ATP13A5Q4VNC0 1218 aa14.76□□□□□ -0.05
RTN3-205ENST00000356000 SFRP4Q6FHJ7 346 aaPredicted RBP14.76□□□□□ -0.05
RTN3-205ENST00000356000 KIAA1161Q6NSJ0 714 aa14.76□□□□□ -0.05
RTN3-205ENST00000356000 SNX33Q8WV41 574 aa14.76□□□□□ -0.05
RTN3-205ENST00000356000 ZNF582Q96NG8 517 aaPredicted RBP14.76□□□□□ -0.05
RTN3-205ENST00000356000 PCYT2Q99447 389 aa14.76□□□□□ -0.05
RTN3-205ENST00000356000 COPS8Q99627 209 aa14.76□□□□□ -0.05
RTN3-205ENST00000356000 NTMT1Q9BV86 223 aa14.76□□□□□ -0.05
RTN3-205ENST00000356000 MFFQ9GZY8 342 aa14.76□□□□□ -0.05
RTN3-205ENST00000356000 WNT5BQ9H1J7 359 aa14.76□□□□□ -0.05
RTN3-205ENST00000356000 EXOSC1Q9Y3B2 195 aaKnown RBP14.76□□□□□ -0.05
RTN3-205ENST00000356000 OR10H1Q9Y4A9 318 aa14.76□□□□□ -0.05
RTN3-205ENST00000356000 PCDHB9Q9Y5E1 797 aa14.76□□□□□ -0.05
RTN3-205ENST00000356000 TRAPPC13A5PLN9 417 aa14.76□□□□□ -0.05
RTN3-205ENST00000356000 SNRPGP15A8MWD9 76 aa14.76□□□□□ -0.05
RTN3-205ENST00000356000 ZNF879B4DU55 563 aa14.76□□□□□ -0.05
RTN3-205ENST00000356000 KIAA0355O15063 1070 aa14.76□□□□□ -0.05
RTN3-205ENST00000356000 OIP5O43482 229 aa14.76□□□□□ -0.05
RTN3-205ENST00000356000 TLX2O43763 284 aaPredicted RBP14.76□□□□□ -0.05
RTN3-205ENST00000356000 UBXN7O94888 489 aa14.76□□□□□ -0.05
RTN3-205ENST00000356000 LATS1O95835 1130 aa14.76□□□□□ -0.05
RTN3-205ENST00000356000 F12P00748 615 aaPredicted RBP14.76□□□□□ -0.05
RTN3-205ENST00000356000 LIMS3P0CW19 117 aa14.76□□□□□ -0.05
RTN3-205ENST00000356000 LIMS4P0CW20 117 aa14.76□□□□□ -0.05
RTN3-205ENST00000356000 SDC1P18827 310 aa14.76□□□□□ -0.05
RTN3-205ENST00000356000 CD86P42081 329 aa14.76□□□□□ -0.05
RTN3-205ENST00000356000 AKR1C2P52895 323 aa14.76□□□□□ -0.05
RTN3-205ENST00000356000 WNT3P56703 355 aa14.76□□□□□ -0.05
RTN3-205ENST00000356000 AKR1C1Q04828 323 aa14.76□□□□□ -0.05
RTN3-205ENST00000356000 FAM110CQ1W6H9 321 aa14.76□□□□□ -0.05
RTN3-205ENST00000356000 SIDT2Q8NBJ9 832 aaKnown RBP14.76□□□□□ -0.05
RTN3-205ENST00000356000 C11orf65Q8NCR3 313 aa14.76□□□□□ -0.05
RTN3-205ENST00000356000 OR13C4Q8NGS5 318 aa14.76□□□□□ -0.05
RTN3-205ENST00000356000 SOX7Q9BT81 388 aa14.76□□□□□ -0.05
RTN3-205ENST00000356000 C1GALT1Q9NS00 363 aa14.76□□□□□ -0.05
RTN3-205ENST00000356000 TAS2R5Q9NYW4 299 aa14.76□□□□□ -0.05
RTN3-205ENST00000356000 CA14Q9ULX7 337 aa14.76□□□□□ -0.05
RTN3-205ENST00000356000 PCDHB10Q9UN67 800 aa14.76□□□□□ -0.05
RTN3-205ENST00000356000 IRGMA1A4Y4 181 aa14.75□□□□□ -0.05
RTN3-205ENST00000356000 LRRN3E7EW58 273 aa14.75□□□□□ -0.05
RTN3-205ENST00000356000 ARPC1BO15143 372 aaKnown RBP14.75□□□□□ -0.05
RTN3-205ENST00000356000 GSTZ1O43708 216 aaPredicted RBP14.75□□□□□ -0.05
RTN3-205ENST00000356000 TLR5O60602 858 aa14.75□□□□□ -0.05
RTN3-205ENST00000356000 RB1P06400 928 aa14.75□□□□□ -0.05
RTN3-205ENST00000356000 RCC1P18754 421 aaPredicted RBP14.75□□□□□ -0.05
RTN3-205ENST00000356000 UQCRC2P22695 453 aa14.75□□□□□ -0.05
RTN3-205ENST00000356000 VAMP1P23763 118 aa14.75□□□□□ -0.05
RTN3-205ENST00000356000 NFYBP25208 207 aa14.75□□□□□ -0.05
RTN3-205ENST00000356000 HCCSP53701 268 aa14.75□□□□□ -0.05
RTN3-205ENST00000356000 GMFBP60983 142 aa14.75□□□□□ -0.05
RTN3-205ENST00000356000 TLE2Q04725 743 aa14.75□□□□□ -0.05
RTN3-205ENST00000356000 MBTD1Q05BQ5 628 aa14.75□□□□□ -0.05
RTN3-205ENST00000356000 RAB40BQ12829 278 aa14.75□□□□□ -0.05
RTN3-205ENST00000356000 IHHQ14623 411 aa14.75□□□□□ -0.05
RTN3-205ENST00000356000 GANABQ14697 944 aaKnown RBP14.75□□□□□ -0.05
RTN3-205ENST00000356000 CYB5R2Q6BCY4 276 aa14.75□□□□□ -0.05
RTN3-205ENST00000356000 FAM111BQ6SJ93 734 aa14.75□□□□□ -0.05
RTN3-205ENST00000356000 SLC30A8Q8IWU4 369 aa14.75□□□□□ -0.05
RTN3-205ENST00000356000 C15orf54Q8N8G6 183 aa14.75□□□□□ -0.05
RTN3-205ENST00000356000 RTL3Q8N8U3 475 aaKnown RBP14.75□□□□□ -0.05
RTN3-205ENST00000356000 OR1S2Q8NGQ3 325 aa14.75□□□□□ -0.05
RTN3-205ENST00000356000 TRMT10AQ8TBZ6 339 aaKnown RBP14.75□□□□□ -0.05
RTN3-205ENST00000356000 ZNF354BQ96LW1 612 aa14.75□□□□□ -0.05
RTN3-205ENST00000356000 POLR1EQ9GZS1 481 aaKnown RBP14.75□□□□□ -0.05
RTN3-205ENST00000356000 LRRN3Q9H3W5 708 aa14.75□□□□□ -0.05
RTN3-205ENST00000356000 RASD1Q9Y272 281 aa14.75□□□□□ -0.05
RTN3-205ENST00000356000 ARL5AQ9Y689 179 aa14.75□□□□□ -0.05
RTN3-205ENST00000356000 CHD5Q8TDI0 1954 aa14.75□□□□□ -0.05
RTN3-205ENST00000356000 FAM227AF5H4B4 570 aa14.75□□□□□ -0.05
RTN3-205ENST00000356000 EFCAB14O75071 495 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms