RNA–Protein interactions for RNA: ENST00000355192.7

MSRB3-202, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 1 (best) BASIC

Gene MSRB3, Length 4,289 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-202ENST00000355192 ZNF550Q7Z398 422 aa13.13□□□□□ -0.31
MSRB3-202ENST00000355192 RBM45Q8IUH3 476 aaKnown RBP13.13□□□□□ -0.31
MSRB3-202ENST00000355192 MFSD4AQ8N468 514 aa13.13□□□□□ -0.31
MSRB3-202ENST00000355192 RNASE11Q8TAA1 199 aaKnown RBP13.13□□□□□ -0.31
MSRB3-202ENST00000355192 OR52D1Q9H346 318 aa13.13□□□□□ -0.31
MSRB3-202ENST00000355192 SLC28A3Q9HAS3 691 aa13.13□□□□□ -0.31
MSRB3-202ENST00000355192 GALNT9Q9HCQ5 603 aa13.13□□□□□ -0.31
MSRB3-202ENST00000355192 TEX10Q9NXF1 929 aaPredicted RBP13.13□□□□□ -0.31
MSRB3-202ENST00000355192 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.13□□□□□ -0.31
MSRB3-202ENST00000355192 TMEM202A6NGA9 273 aa13.13□□□□□ -0.31
MSRB3-202ENST00000355192 UPK1AO00322 258 aa13.13□□□□□ -0.31
MSRB3-202ENST00000355192 ZNF776Q68DI1 518 aaPredicted RBP13.13□□□□□ -0.31
MSRB3-202ENST00000355192 LRRN1Q6UXK5 716 aa13.13□□□□□ -0.31
MSRB3-202ENST00000355192 SPERTQ8NA61 448 aa13.13□□□□□ -0.31
MSRB3-202ENST00000355192 ZNF226Q9NYT6 803 aa13.13□□□□□ -0.31
MSRB3-202ENST00000355192 KLHL9Q9P2J3 617 aa13.13□□□□□ -0.31
MSRB3-202ENST00000355192 GRHPRQ9UBQ7 328 aa13.13□□□□□ -0.31
MSRB3-202ENST00000355192 FBXL21Q9UKT6 434 aa13.13□□□□□ -0.31
MSRB3-202ENST00000355192 PLEKHA6Q9Y2H5 1048 aa13.13□□□□□ -0.31
MSRB3-202ENST00000355192 SLCO2B1O94956 709 aa13.13□□□□□ -0.31
MSRB3-202ENST00000355192 TFP02787 698 aa13.13□□□□□ -0.31
MSRB3-202ENST00000355192 GYPBP06028 91 aa13.13□□□□□ -0.31
MSRB3-202ENST00000355192 GKN3PP0CG01 181 aa13.13□□□□□ -0.31
MSRB3-202ENST00000355192 KCNJ5P48544 419 aa13.13□□□□□ -0.31
MSRB3-202ENST00000355192 YBX1P67809 324 aaKnown RBP13.13□□□□□ -0.31
MSRB3-202ENST00000355192 CHRNEQ04844 493 aa13.13□□□□□ -0.31
MSRB3-202ENST00000355192 AMZ1Q400G9 498 aa13.13□□□□□ -0.31
MSRB3-202ENST00000355192 ALG10BQ5I7T1 473 aa13.13□□□□□ -0.31
MSRB3-202ENST00000355192 ZNF527Q8NB42 609 aa13.13□□□□□ -0.31
MSRB3-202ENST00000355192 SLC7A13Q8TCU3 470 aa13.13□□□□□ -0.31
MSRB3-202ENST00000355192 CASTOR1Q8WTX7 329 aa13.13□□□□□ -0.31
MSRB3-202ENST00000355192 HAVCR1Q96D42 359 aa13.13□□□□□ -0.31
MSRB3-202ENST00000355192 CCDC120Q96HB5 630 aa13.13□□□□□ -0.31
MSRB3-202ENST00000355192 HOXD1Q9GZZ0 328 aa13.13□□□□□ -0.31
MSRB3-202ENST00000355192 MVB12BQ9H7P6 319 aa13.13□□□□□ -0.31
MSRB3-202ENST00000355192 PLEKHA1Q9HB21 404 aa13.13□□□□□ -0.31
MSRB3-202ENST00000355192 ACSS1Q9NUB1 689 aaPredicted RBP13.13□□□□□ -0.31
MSRB3-202ENST00000355192 SPATA6Q9NWH7 488 aaPredicted RBP13.13□□□□□ -0.31
MSRB3-202ENST00000355192 SIRT5Q9NXA8 310 aa13.13□□□□□ -0.31
MSRB3-202ENST00000355192 TAS2R3Q9NYW6 316 aa13.13□□□□□ -0.31
MSRB3-202ENST00000355192 SCP2D1Q9UJQ7 156 aa13.13□□□□□ -0.31
MSRB3-202ENST00000355192 SH2B3Q9UQQ2 575 aa13.13□□□□□ -0.31
MSRB3-202ENST00000355192 SPNP16150 400 aa13.13□□□□□ -0.31
MSRB3-202ENST00000355192 HMGA1P17096 107 aaKnown RBP13.13□□□□□ -0.31
MSRB3-202ENST00000355192 PRKACBP22694 351 aa13.13□□□□□ -0.31
MSRB3-202ENST00000355192 MLLT3P42568 568 aaPredicted RBP13.13□□□□□ -0.31
MSRB3-202ENST00000355192 SNRPGP62308 76 aaKnown RBP13.13□□□□□ -0.31
MSRB3-202ENST00000355192 SERPINA12Q8IW75 414 aa13.13□□□□□ -0.31
MSRB3-202ENST00000355192 TMEM239Q8WW34 195 aa13.13□□□□□ -0.31
MSRB3-202ENST00000355192 NEURL3Q96EH8 262 aa13.13□□□□□ -0.31
MSRB3-202ENST00000355192 SGTBQ96EQ0 304 aa13.13□□□□□ -0.31
MSRB3-202ENST00000355192 TMEM184CQ9NVA4 438 aa13.13□□□□□ -0.31
MSRB3-202ENST00000355192 USP36Q9P275 1121 aaKnown RBP13.13□□□□□ -0.31
MSRB3-202ENST00000355192 FBXL3Q9UKT7 428 aa13.13□□□□□ -0.31
MSRB3-202ENST00000355192 SMLR1H3BR10 107 aa13.12□□□□□ -0.31
MSRB3-202ENST00000355192 SCDO00767 359 aa13.12□□□□□ -0.31
MSRB3-202ENST00000355192 NPPBP16860 134 aa13.12□□□□□ -0.31
MSRB3-202ENST00000355192 GFOD2Q3B7J2 385 aa13.12□□□□□ -0.31
MSRB3-202ENST00000355192 ENTPD8Q5MY95 495 aa13.12□□□□□ -0.31
MSRB3-202ENST00000355192 FAM71E1Q6IPT2 247 aa13.12□□□□□ -0.31
MSRB3-202ENST00000355192 FAM198BQ6UWH4 519 aa13.12□□□□□ -0.31
MSRB3-202ENST00000355192 NUP54Q7Z3B4 507 aa13.12□□□□□ -0.31
MSRB3-202ENST00000355192 OR6T1Q8NGN1 323 aa13.12□□□□□ -0.31
MSRB3-202ENST00000355192 OR5J2Q8NH18 312 aa13.12□□□□□ -0.31
MSRB3-202ENST00000355192 METTL21AQ8WXB1 218 aa13.12□□□□□ -0.31
MSRB3-202ENST00000355192 TM9SF4Q92544 642 aa13.12□□□□□ -0.31
MSRB3-202ENST00000355192 MNTQ99583 582 aa13.12□□□□□ -0.31
MSRB3-202ENST00000355192 TBL1XR1Q9BZK7 514 aa13.12□□□□□ -0.31
MSRB3-202ENST00000355192 TREM1Q9NP99 234 aa13.12□□□□□ -0.31
MSRB3-202ENST00000355192 C13orf42A0A1B0GVH6 325 aa13.12□□□□□ -0.31
MSRB3-202ENST00000355192 OR52A4PA6NMU1 304 aa13.12□□□□□ -0.31
MSRB3-202ENST00000355192 GFYI3L273 518 aa13.12□□□□□ -0.31
MSRB3-202ENST00000355192 ARPC5O15511 151 aa13.12□□□□□ -0.31
MSRB3-202ENST00000355192 FABP7O15540 132 aa13.12□□□□□ -0.31
MSRB3-202ENST00000355192 ZDHHC11BP0C7U3 371 aa13.12□□□□□ -0.31
MSRB3-202ENST00000355192 EVI2BP34910 448 aa13.12□□□□□ -0.31
MSRB3-202ENST00000355192 VIPR2P41587 438 aa13.12□□□□□ -0.31
MSRB3-202ENST00000355192 MRPL19P49406 292 aaKnown RBP13.12□□□□□ -0.31
MSRB3-202ENST00000355192 ART1P52961 327 aa13.12□□□□□ -0.31
MSRB3-202ENST00000355192 SLC7A9P82251 487 aa13.12□□□□□ -0.31
MSRB3-202ENST00000355192 EFR3AQ14156 821 aa13.12□□□□□ -0.31
MSRB3-202ENST00000355192 ZNF385BQ569K4 471 aa13.12□□□□□ -0.31
MSRB3-202ENST00000355192 LRRC56Q8IYG6 542 aaPredicted RBP13.12□□□□□ -0.31
MSRB3-202ENST00000355192 SLC39A11Q8N1S5 342 aa13.12□□□□□ -0.31
MSRB3-202ENST00000355192 NANOGP1Q8N7R0 232 aa13.12□□□□□ -0.31
MSRB3-202ENST00000355192 PCNPQ8WW12 178 aaKnown RBP13.12□□□□□ -0.31
MSRB3-202ENST00000355192 HPF1Q9NWY4 346 aa13.12□□□□□ -0.31
MSRB3-202ENST00000355192 NINQ8N4C6 2090 aa13.12□□□□□ -0.31
MSRB3-202ENST00000355192 METTL21EPA6NDL7 271 aa13.12□□□□□ -0.31
MSRB3-202ENST00000355192 TMEM150CB9EJG8 249 aa13.12□□□□□ -0.31
MSRB3-202ENST00000355192 CLEC3AO75596 197 aa13.12□□□□□ -0.31
MSRB3-202ENST00000355192 CDC123O75794 336 aaPredicted RBP13.12□□□□□ -0.31
MSRB3-202ENST00000355192 MMP11P24347 488 aa13.12□□□□□ -0.31
MSRB3-202ENST00000355192 GDI1P31150 447 aa13.12□□□□□ -0.31
MSRB3-202ENST00000355192 OR3A3P47888 321 aa13.12□□□□□ -0.31
MSRB3-202ENST00000355192 OR3A2P47893 321 aa13.12□□□□□ -0.31
MSRB3-202ENST00000355192 ARFRP1Q13795 201 aa13.12□□□□□ -0.31
MSRB3-202ENST00000355192 TOMM20Q15388 145 aa13.12□□□□□ -0.31
MSRB3-202ENST00000355192 C4orf36Q96KX1 117 aa13.12□□□□□ -0.31
MSRB3-202ENST00000355192 MS4A4EQ96PG1 132 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms