RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 PSPHP78330 225 aa20.73■□□□□ 0.91
NKX2-1-201ENST00000354822 OR2G6Q5TZ20 316 aa20.73■□□□□ 0.91
NKX2-1-201ENST00000354822 NXNL2Q5VZ03 156 aa20.73■□□□□ 0.91
NKX2-1-201ENST00000354822 Q6ZSR6 202 aa20.73■□□□□ 0.91
NKX2-1-201ENST00000354822 FAM3CQ92520 227 aa20.73■□□□□ 0.91
NKX2-1-201ENST00000354822 TMCO6Q96DC7 493 aa20.73■□□□□ 0.91
NKX2-1-201ENST00000354822 TXNDC15Q96J42 360 aa20.73■□□□□ 0.91
NKX2-1-201ENST00000354822 C8orf33Q9H7E9 229 aaPredicted RBP20.73■□□□□ 0.91
NKX2-1-201ENST00000354822 IL21RQ9HBE5 538 aa20.73■□□□□ 0.91
NKX2-1-201ENST00000354822 CD93Q9NPY3 652 aa20.73■□□□□ 0.91
NKX2-1-201ENST00000354822 TRPV5Q9NQA5 729 aa20.73■□□□□ 0.91
NKX2-1-201ENST00000354822 CPNE7Q9UBL6 633 aa20.73■□□□□ 0.91
NKX2-1-201ENST00000354822 CMAHPQ9Y471 501 aa20.73■□□□□ 0.91
NKX2-1-201ENST00000354822 PIAS3Q9Y6X2 628 aa20.73■□□□□ 0.91
NKX2-1-201ENST00000354822 F5P12259 2224 aa20.73■□□□□ 0.91
NKX2-1-201ENST00000354822 OR5K4A6NMS3 321 aa20.73■□□□□ 0.91
NKX2-1-201ENST00000354822 SNPHO15079 494 aa20.73■□□□□ 0.91
NKX2-1-201ENST00000354822 DNAJB6O75190 326 aa20.73■□□□□ 0.91
NKX2-1-201ENST00000354822 LIMS3P0CW19 117 aa20.73■□□□□ 0.91
NKX2-1-201ENST00000354822 LIMS4P0CW20 117 aa20.73■□□□□ 0.91
NKX2-1-201ENST00000354822 HTR1FP30939 366 aa20.73■□□□□ 0.91
NKX2-1-201ENST00000354822 ZNF136P52737 540 aa20.73■□□□□ 0.91
NKX2-1-201ENST00000354822 FLYWCH1Q4VC44 716 aa20.73■□□□□ 0.91
NKX2-1-201ENST00000354822 DCST2Q5T1A1 773 aa20.73■□□□□ 0.91
NKX2-1-201ENST00000354822 HSDL2Q6YN16 418 aa20.73■□□□□ 0.91
NKX2-1-201ENST00000354822 GPBAR1Q8TDU6 330 aa20.73■□□□□ 0.91
NKX2-1-201ENST00000354822 TM9SF4Q92544 642 aa20.73■□□□□ 0.91
NKX2-1-201ENST00000354822 C1GALT1C1Q96EU7 318 aa20.73■□□□□ 0.91
NKX2-1-201ENST00000354822 COQ7Q99807 217 aa20.73■□□□□ 0.91
NKX2-1-201ENST00000354822 ADAP2Q9NPF8 381 aa20.73■□□□□ 0.91
NKX2-1-201ENST00000354822 CAB39Q9Y376 341 aaPredicted RBP20.73■□□□□ 0.91
NKX2-1-201ENST00000354822 SF3B6Q9Y3B4 125 aaKnown RBP20.73■□□□□ 0.91
NKX2-1-201ENST00000354822 PLD2O14939 933 aa20.72■□□□□ 0.91
NKX2-1-201ENST00000354822 CHST10O43529 356 aa20.72■□□□□ 0.91
NKX2-1-201ENST00000354822 FMO6PO60774 539 aa20.72■□□□□ 0.91
NKX2-1-201ENST00000354822 SOX30O94993 753 aa20.72■□□□□ 0.91
NKX2-1-201ENST00000354822 KCNK2O95069 426 aa20.72■□□□□ 0.91
NKX2-1-201ENST00000354822 EIF2S1P05198 315 aaKnown RBP20.72■□□□□ 0.91
NKX2-1-201ENST00000354822 FGF9P31371 208 aaPredicted RBP20.72■□□□□ 0.91
NKX2-1-201ENST00000354822 SOX18P35713 384 aa20.72■□□□□ 0.91
NKX2-1-201ENST00000354822 SLC1A3P43003 542 aa20.72■□□□□ 0.91
NKX2-1-201ENST00000354822 RABIFP47224 123 aa20.72■□□□□ 0.91
NKX2-1-201ENST00000354822 C22orf42Q6IC83 251 aa20.72■□□□□ 0.91
NKX2-1-201ENST00000354822 RNF44Q7L0R7 432 aa20.72■□□□□ 0.91
NKX2-1-201ENST00000354822 GDPD3Q7L5L3 318 aa20.72■□□□□ 0.91
NKX2-1-201ENST00000354822 SIMC1Q8NDZ2 872 aa20.72■□□□□ 0.91
NKX2-1-201ENST00000354822 ASB15Q8WXK1 588 aa20.72■□□□□ 0.91
NKX2-1-201ENST00000354822 GSDMCQ9BYG8 508 aa20.72■□□□□ 0.91
NKX2-1-201ENST00000354822 EVA1AQ9H8M9 152 aa20.72■□□□□ 0.91
NKX2-1-201ENST00000354822 ERVK13-1Q9NX77 482 aa20.72■□□□□ 0.91
NKX2-1-201ENST00000354822 A0A0J9YY10 115 aa20.72■□□□□ 0.91
NKX2-1-201ENST00000354822 NID1P14543 1247 aa20.72■□□□□ 0.91
NKX2-1-201ENST00000354822 NT5EP21589 574 aa20.72■□□□□ 0.91
NKX2-1-201ENST00000354822 CD300CQ08708 224 aa20.72■□□□□ 0.91
NKX2-1-201ENST00000354822 ACSM1Q08AH1 577 aa20.72■□□□□ 0.91
NKX2-1-201ENST00000354822 CCBE1Q6UXH8 406 aaPredicted RBP20.72■□□□□ 0.91
NKX2-1-201ENST00000354822 TMEM92Q6UXU6 159 aa20.72■□□□□ 0.91
NKX2-1-201ENST00000354822 COX18Q8N8Q8 333 aa20.72■□□□□ 0.91
NKX2-1-201ENST00000354822 PSD4Q8NDX1 1056 aa20.72■□□□□ 0.91
NKX2-1-201ENST00000354822 GPR151Q8TDV0 419 aa20.72■□□□□ 0.91
NKX2-1-201ENST00000354822 TMEM203Q969S6 136 aa20.72■□□□□ 0.91
NKX2-1-201ENST00000354822 TPK1Q9H3S4 243 aa20.72■□□□□ 0.91
NKX2-1-201ENST00000354822 KIR2DS5A0A0G2JLQ3 304 aa20.71■□□□□ 0.91
NKX2-1-201ENST00000354822 A0A0G2JNG1 304 aa20.71■□□□□ 0.91
NKX2-1-201ENST00000354822 KIR2DS3K7RE56 304 aa20.71■□□□□ 0.91
NKX2-1-201ENST00000354822 CYR61O00622 381 aa20.71■□□□□ 0.91
NKX2-1-201ENST00000354822 NTN1O95631 604 aa20.71■□□□□ 0.91
NKX2-1-201ENST00000354822 CH25HO95992 272 aa20.71■□□□□ 0.91
NKX2-1-201ENST00000354822 KIR2DS5Q14953 304 aa20.71■□□□□ 0.91
NKX2-1-201ENST00000354822 CRTC2Q53ET0 693 aaPredicted RBP20.71■□□□□ 0.91
NKX2-1-201ENST00000354822 DESI1Q6ICB0 168 aa20.71■□□□□ 0.91
NKX2-1-201ENST00000354822 QSOX2Q6ZRP7 698 aa20.71■□□□□ 0.91
NKX2-1-201ENST00000354822 C11orf74Q86VG3 221 aa20.71■□□□□ 0.91
NKX2-1-201ENST00000354822 OR8H2Q8N162 312 aa20.71■□□□□ 0.91
NKX2-1-201ENST00000354822 ZNF485Q8NCK3 441 aa20.71■□□□□ 0.91
NKX2-1-201ENST00000354822 BRIX1Q8TDN6 353 aaKnown RBP20.71■□□□□ 0.91
NKX2-1-201ENST00000354822 AP3S1Q92572 193 aa20.71■□□□□ 0.91
NKX2-1-201ENST00000354822 JAM3Q9BX67 310 aa20.71■□□□□ 0.91
NKX2-1-201ENST00000354822 KLHL25Q9H0H3 589 aa20.71■□□□□ 0.91
NKX2-1-201ENST00000354822 POLE3Q9NRF9 147 aa20.71■□□□□ 0.91
NKX2-1-201ENST00000354822 HRASLS2Q9NWW9 162 aa20.71■□□□□ 0.91
NKX2-1-201ENST00000354822 FBXL21Q9UKT6 434 aa20.71■□□□□ 0.91
NKX2-1-201ENST00000354822 APOL3O95236 402 aa20.7■□□□□ 0.91
NKX2-1-201ENST00000354822 CCNJQ5T5M9 372 aa20.7■□□□□ 0.91
NKX2-1-201ENST00000354822 CD200R1LQ6Q8B3 271 aa20.7■□□□□ 0.91
NKX2-1-201ENST00000354822 GALNT12Q8IXK2 581 aa20.7■□□□□ 0.91
NKX2-1-201ENST00000354822 SMRP1Q8NCR6 262 aa20.7■□□□□ 0.91
NKX2-1-201ENST00000354822 RPLP0P6Q8NHW5 317 aa20.7■□□□□ 0.91
NKX2-1-201ENST00000354822 PRSS27Q9BQR3 290 aa20.7■□□□□ 0.91
NKX2-1-201ENST00000354822 V9GYH0 126 aa20.7■□□□□ 0.91
NKX2-1-201ENST00000354822 TRDV1A0A1B0GX56 115 aa20.7■□□□□ 0.9
NKX2-1-201ENST00000354822 ZNF860A6NHJ4 632 aa20.7■□□□□ 0.9
NKX2-1-201ENST00000354822 UNC119BA6NIH7 251 aa20.7■□□□□ 0.9
NKX2-1-201ENST00000354822 FGF17O60258 216 aa20.7■□□□□ 0.9
NKX2-1-201ENST00000354822 PIP5K1CO60331 668 aa20.7■□□□□ 0.9
NKX2-1-201ENST00000354822 GALR3O60755 368 aaPredicted RBP20.7■□□□□ 0.9
NKX2-1-201ENST00000354822 LDB3O75112 727 aa20.7■□□□□ 0.9
NKX2-1-201ENST00000354822 MSL3P1P0C860 447 aa20.7■□□□□ 0.9
NKX2-1-201ENST00000354822 GAAP10253 952 aa20.7■□□□□ 0.9
NKX2-1-201ENST00000354822 UBE2IP63279 158 aaKnown RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms