RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 SPIBQ01892 262 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 CD47Q08722 323 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 NPRL3Q12980 569 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 DNASE1L3Q13609 305 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 TP53BP2Q13625 1128 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 TUBA3CQ13748 450 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 CTU2Q2VPK5 515 aaKnown RBP7.63□□□□□ -1.19
CD44-205ENST00000352818 TNFAIP8L2Q6P589 184 aaPredicted RBP7.63□□□□□ -1.19
CD44-205ENST00000352818 C6orf15Q6UXA7 325 aaPredicted RBP7.63□□□□□ -1.19
CD44-205ENST00000352818 B3GNT6Q6ZMB0 384 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 FAM92BQ6ZTR7 304 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 GPR141Q7Z602 305 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 MRGPRGQ86SM5 289 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 TSPYL5Q86VY4 417 aaPredicted RBP7.63□□□□□ -1.19
CD44-205ENST00000352818 KRT73Q86Y46 540 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 PHC2Q8IXK0 858 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 PARP8Q8N3A8 854 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 TTC29Q8NA56 475 aaPredicted RBP7.63□□□□□ -1.19
CD44-205ENST00000352818 ATG16L2Q8NAA4 619 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 ZNF420Q8TAQ5 688 aaPredicted RBP7.63□□□□□ -1.19
CD44-205ENST00000352818 SLC37A2Q8TED4 501 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 CT55Q8WUE5 264 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 PATE1Q8WXA2 126 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 KLHL6Q8WZ60 621 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 CCDC120Q96HB5 630 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 ZNF354BQ96LW1 612 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 APOL4Q9BPW4 351 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 MAPKAP1Q9BPZ7 522 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 ZPBPQ9BS86 351 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 SPATA5L1Q9BVQ7 753 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 NPLQ9BXD5 320 aaPredicted RBP7.63□□□□□ -1.19
CD44-205ENST00000352818 OR51I1Q9H343 314 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 VCX3AQ9NNX9 186 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 ZCCHC3Q9NUD5 404 aaKnown RBP7.63□□□□□ -1.19
CD44-205ENST00000352818 CALML5Q9NZT1 146 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 KCMF1Q9P0J7 381 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 C5AR2Q9P296 337 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 ACAD8Q9UKU7 415 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 POMT2Q9UKY4 750 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 DSPPQ9NZW4 1301 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 A0A0G2JPF8 293 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 PRAMEF27A3QJZ7 478 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 LILRA5A6NI73 299 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 A8MU76 341 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 HNRNPCL2B2RXH8 293 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 HNRNPCL3B7ZW38 293 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 SLC1A7O00341 560 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 SYT5O00445 386 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 PGRMC2O15173 223 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 P2RX6O15547 441 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 MITFO75030 526 aaPredicted RBP7.62□□□□□ -1.19
CD44-205ENST00000352818 ERAL1O75616 437 aaKnown RBP7.62□□□□□ -1.19
CD44-205ENST00000352818 SERPINB7O75635 380 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 SEC24DO94855 1032 aaPredicted RBP7.62□□□□□ -1.19
CD44-205ENST00000352818 AGR2O95994 175 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 HNRNPCL4P0DMR1 293 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 ALOX12P18054 663 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 MATN1P21941 496 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 ELK4P28324 431 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 TLX1P31314 330 aaPredicted RBP7.62□□□□□ -1.19
CD44-205ENST00000352818 FASLGP48023 281 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 MAN2A2P49641 1150 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 CASP9P55211 416 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 LIM2P55344 173 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 SMIM11AP58511 58 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 RAB8AP61006 207 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 RPS26P62854 115 aaKnown RBP7.62□□□□□ -1.19
CD44-205ENST00000352818 CSNK2BP67870 215 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 BTN3A2P78410 334 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 DUSP2Q05923 314 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 Q0VFX4 171 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 FUT5Q11128 374 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 PPP1R8Q12972 351 aaKnown RBP7.62□□□□□ -1.19
CD44-205ENST00000352818 LSAMPQ13449 338 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 RAPSNQ13702 412 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 MICAQ29983 383 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.62□□□□□ -1.19
CD44-205ENST00000352818 C18orf63Q68DL7 685 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 ANKRD34AQ69YU3 496 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 LAIR2Q6ISS4 152 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 NIPAL1Q6NVV3 410 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 TMEM71Q6P5X7 295 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 KLHL35Q6PF15 583 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 TAF8Q7Z7C8 310 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 BIVMQ86UB2 503 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 TRIM73Q86UV7 250 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 ZGRF1Q86YA3 2104 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 ZNF808Q8N4W9 903 aaPredicted RBP7.62□□□□□ -1.19
CD44-205ENST00000352818 KCT2Q8NC54 265 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 GPR32P1Q8NGA4 272 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 OR10G2Q8NGC3 310 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 OR10G6Q8NH81 332 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 ZDHHC1Q8WTX9 485 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 THAP4Q8WY91 577 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 NR4A3Q92570 626 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 PROX1Q92786 737 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 UCN3Q969E3 161 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 RERGQ96A58 199 aaPredicted RBP7.62□□□□□ -1.19
CD44-205ENST00000352818 FKBP10Q96AY3 582 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms