RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 KLHL12Q53G59 568 aa12.97□□□□□ -0.33
TRIM4-201ENST00000349062 ENTPD8Q5MY95 495 aa12.97□□□□□ -0.33
TRIM4-201ENST00000349062 OR2G6Q5TZ20 316 aa12.97□□□□□ -0.33
TRIM4-201ENST00000349062 MRM1Q6IN84 353 aaKnown RBP12.97□□□□□ -0.33
TRIM4-201ENST00000349062 DGAT2L6Q6ZPD8 337 aa12.97□□□□□ -0.33
TRIM4-201ENST00000349062 SHISA6Q6ZSJ9 500 aa12.97□□□□□ -0.33
TRIM4-201ENST00000349062 OR51A7Q8NH64 312 aa12.97□□□□□ -0.33
TRIM4-201ENST00000349062 MMABQ96EY8 250 aaPredicted RBP12.97□□□□□ -0.33
TRIM4-201ENST00000349062 MGLLQ99685 303 aa12.97□□□□□ -0.33
TRIM4-201ENST00000349062 SPATA5L1Q9BVQ7 753 aa12.97□□□□□ -0.33
TRIM4-201ENST00000349062 ACTRT3Q9BYD9 372 aa12.97□□□□□ -0.33
TRIM4-201ENST00000349062 TTYH1Q9H313 450 aaPredicted RBP12.97□□□□□ -0.33
TRIM4-201ENST00000349062 NT5DC2Q9H857 520 aa12.97□□□□□ -0.33
TRIM4-201ENST00000349062 CPNE5Q9HCH3 593 aa12.97□□□□□ -0.33
TRIM4-201ENST00000349062 TRPV5Q9NQA5 729 aa12.97□□□□□ -0.33
TRIM4-201ENST00000349062 USP36Q9P275 1121 aaKnown RBP12.97□□□□□ -0.33
TRIM4-201ENST00000349062 CES1P1Q9UKY3 287 aa12.97□□□□□ -0.33
TRIM4-201ENST00000349062 URADA6NGE7 173 aa12.97□□□□□ -0.33
TRIM4-201ENST00000349062 M0R082 166 aa12.97□□□□□ -0.33
TRIM4-201ENST00000349062 CSF2P04141 144 aa12.97□□□□□ -0.33
TRIM4-201ENST00000349062 NXNL2Q5VZ03 156 aa12.97□□□□□ -0.33
TRIM4-201ENST00000349062 ZAR1Q86SH2 424 aa12.97□□□□□ -0.33
TRIM4-201ENST00000349062 LILRB4Q8NHJ6 448 aa12.97□□□□□ -0.33
TRIM4-201ENST00000349062 TEX47Q8TBZ9 253 aa12.97□□□□□ -0.33
TRIM4-201ENST00000349062 POP5Q969H6 163 aaKnown RBP12.97□□□□□ -0.33
TRIM4-201ENST00000349062 PTCHD1Q96NR3 888 aa12.97□□□□□ -0.33
TRIM4-201ENST00000349062 NEDD4LQ96PU5 975 aa12.97□□□□□ -0.33
TRIM4-201ENST00000349062 C8orf33Q9H7E9 229 aaPredicted RBP12.97□□□□□ -0.33
TRIM4-201ENST00000349062 MED20Q9H944 212 aa12.97□□□□□ -0.33
TRIM4-201ENST00000349062 OR2A25A4D2G3 310 aa12.97□□□□□ -0.33
TRIM4-201ENST00000349062 HOXB6P17509 224 aaKnown RBP12.97□□□□□ -0.33
TRIM4-201ENST00000349062 MAOAP21397 527 aa12.97□□□□□ -0.33
TRIM4-201ENST00000349062 RABIFP47224 123 aa12.97□□□□□ -0.33
TRIM4-201ENST00000349062 FAAH2Q6GMR7 532 aa12.97□□□□□ -0.33
TRIM4-201ENST00000349062 PEX5LQ8IYB4 626 aa12.97□□□□□ -0.33
TRIM4-201ENST00000349062 POLR2J2Q9GZM3 115 aaKnown RBP12.97□□□□□ -0.33
TRIM4-201ENST00000349062 ATP13A2Q9NQ11 1180 aa12.97□□□□□ -0.33
TRIM4-201ENST00000349062 TIGARQ9NQ88 270 aa12.97□□□□□ -0.33
TRIM4-201ENST00000349062 SCML1Q9UN30 329 aa12.97□□□□□ -0.33
TRIM4-201ENST00000349062 MUC22E2RYF6 1773 aaPredicted RBP12.96□□□□□ -0.33
TRIM4-201ENST00000349062 FAAHO00519 579 aa12.96□□□□□ -0.33
TRIM4-201ENST00000349062 SAGP10523 405 aaPredicted RBP12.96□□□□□ -0.33
TRIM4-201ENST00000349062 DOC2BQ14184 412 aa12.96□□□□□ -0.33
TRIM4-201ENST00000349062 PUS10Q3MIT2 529 aaKnown RBP12.96□□□□□ -0.33
TRIM4-201ENST00000349062 SYT6Q5T7P8 510 aaPredicted RBP12.96□□□□□ -0.33
TRIM4-201ENST00000349062 KIAA0895LQ68EN5 471 aa12.96□□□□□ -0.33
TRIM4-201ENST00000349062 MFSD12Q6NUT3 480 aa12.96□□□□□ -0.33
TRIM4-201ENST00000349062 NRARPQ7Z6K4 114 aa12.96□□□□□ -0.33
TRIM4-201ENST00000349062 KIAA1958Q8N8K9 716 aa12.96□□□□□ -0.33
TRIM4-201ENST00000349062 C7orf57Q8NEG2 295 aa12.96□□□□□ -0.33
TRIM4-201ENST00000349062 BBS10Q8TAM1 723 aa12.96□□□□□ -0.33
TRIM4-201ENST00000349062 IPCEF1Q8WWN9 437 aaPredicted RBP12.96□□□□□ -0.33
TRIM4-201ENST00000349062 RBM18Q96H35 190 aaKnown RBP12.96□□□□□ -0.33
TRIM4-201ENST00000349062 HSPA12BQ96MM6 686 aa12.96□□□□□ -0.33
TRIM4-201ENST00000349062 ZNF681Q96N22 645 aa12.96□□□□□ -0.33
TRIM4-201ENST00000349062 PITX2Q99697 317 aa12.96□□□□□ -0.33
TRIM4-201ENST00000349062 DPH1Q9BZG8 443 aa12.96□□□□□ -0.33
TRIM4-201ENST00000349062 ANKHQ9HCJ1 492 aa12.96□□□□□ -0.33
TRIM4-201ENST00000349062 YARS2Q9Y2Z4 477 aaKnown RBP12.96□□□□□ -0.33
TRIM4-201ENST00000349062 CLCA3PQ9Y6N3 262 aa12.96□□□□□ -0.33
TRIM4-201ENST00000349062 MYL12BO14950 172 aa12.96□□□□□ -0.34
TRIM4-201ENST00000349062 CD83Q01151 205 aa12.96□□□□□ -0.34
TRIM4-201ENST00000349062 CSTF1Q05048 431 aaKnown RBP12.96□□□□□ -0.34
TRIM4-201ENST00000349062 GXYLT1Q4G148 440 aa12.96□□□□□ -0.34
TRIM4-201ENST00000349062 GATAD2BQ8WXI9 593 aa12.96□□□□□ -0.34
TRIM4-201ENST00000349062 LRRC61Q9BV99 259 aa12.96□□□□□ -0.34
TRIM4-201ENST00000349062 MMP27Q9H306 513 aa12.96□□□□□ -0.34
TRIM4-201ENST00000349062 PCDHGB6Q9Y5F9 930 aa12.96□□□□□ -0.34
TRIM4-201ENST00000349062 CHST10O43529 356 aa12.95□□□□□ -0.34
TRIM4-201ENST00000349062 LGI1O95970 557 aa12.95□□□□□ -0.34
TRIM4-201ENST00000349062 TMEM64Q6YI46 380 aa12.95□□□□□ -0.34
TRIM4-201ENST00000349062 Q7L0L9 218 aa12.95□□□□□ -0.34
TRIM4-201ENST00000349062 OR52R1Q8NGF1 315 aa12.95□□□□□ -0.34
TRIM4-201ENST00000349062 RASSF5Q8WWW0 418 aa12.95□□□□□ -0.34
TRIM4-201ENST00000349062 KLHL6Q8WZ60 621 aa12.95□□□□□ -0.34
TRIM4-201ENST00000349062 TXNDC15Q96J42 360 aa12.95□□□□□ -0.34
TRIM4-201ENST00000349062 SNTG1Q9NSN8 517 aa12.95□□□□□ -0.34
TRIM4-201ENST00000349062 FTSJ1Q9UET6 329 aa12.95□□□□□ -0.34
TRIM4-201ENST00000349062 MGAT4BQ9UQ53 548 aa12.95□□□□□ -0.34
TRIM4-201ENST00000349062 OR10H1Q9Y4A9 318 aa12.95□□□□□ -0.34
TRIM4-201ENST00000349062 KNTC1P50748 2209 aa12.95□□□□□ -0.34
TRIM4-201ENST00000349062 SPTY2D1-AS1A0A0U1RR47 76 aa12.95□□□□□ -0.34
TRIM4-201ENST00000349062 ADAP00813 363 aa12.95□□□□□ -0.34
TRIM4-201ENST00000349062 ACP2P11117 423 aa12.95□□□□□ -0.34
TRIM4-201ENST00000349062 ZNF10P21506 573 aaPredicted RBP12.95□□□□□ -0.34
TRIM4-201ENST00000349062 OR1D4P47884 311 aa12.95□□□□□ -0.34
TRIM4-201ENST00000349062 SLC9A3P48764 834 aa12.95□□□□□ -0.34
TRIM4-201ENST00000349062 ARPC4P59998 168 aa12.95□□□□□ -0.34
TRIM4-201ENST00000349062 TSSK4Q6SA08 328 aa12.95□□□□□ -0.34
TRIM4-201ENST00000349062 OR9Q1Q8NGQ5 310 aa12.95□□□□□ -0.34
TRIM4-201ENST00000349062 DHRS1Q96LJ7 313 aa12.95□□□□□ -0.34
TRIM4-201ENST00000349062 TRNT1Q96Q11 434 aaKnown RBP12.95□□□□□ -0.34
TRIM4-201ENST00000349062 SERINC2Q96SA4 455 aa12.95□□□□□ -0.34
TRIM4-201ENST00000349062 MMP28Q9H239 520 aa12.95□□□□□ -0.34
TRIM4-201ENST00000349062 OR51V1Q9H2C8 321 aa12.95□□□□□ -0.34
TRIM4-201ENST00000349062 LYARQ9NX58 379 aaKnown RBP12.95□□□□□ -0.34
TRIM4-201ENST00000349062 TAS2R7Q9NYW3 318 aa12.95□□□□□ -0.34
TRIM4-201ENST00000349062 PHF11Q9UIL8 331 aa12.95□□□□□ -0.34
TRIM4-201ENST00000349062 CDC14CA4D256 554 aa12.95□□□□□ -0.34
TRIM4-201ENST00000349062 ZAR1LA6NP61 321 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms