RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 LCORQ96JN0 433 aaPredicted RBP17.28■□□□□ 0.36
PTN-201ENST00000348225 FEVQ99581 238 aa17.28■□□□□ 0.36
PTN-201ENST00000348225 SPSB2Q99619 263 aa17.28■□□□□ 0.36
PTN-201ENST00000348225 RLIMQ9NVW2 624 aa17.28■□□□□ 0.36
PTN-201ENST00000348225 SCOCQ9UIL1 159 aa17.28■□□□□ 0.36
PTN-201ENST00000348225 POFUT2Q9Y2G5 429 aa17.28■□□□□ 0.36
PTN-201ENST00000348225 CACNA1HO95180 2353 aa17.27■□□□□ 0.36
PTN-201ENST00000348225 CUL9Q8IWT3 2517 aa17.27■□□□□ 0.36
PTN-201ENST00000348225 C2orf92A0A1B0GVN3 265 aa17.27■□□□□ 0.36
PTN-201ENST00000348225 CDHR4A6H8M9 788 aa17.27■□□□□ 0.36
PTN-201ENST00000348225 FOXD2O60548 495 aaPredicted RBP17.27■□□□□ 0.36
PTN-201ENST00000348225 TNFAIP8O95379 198 aa17.27■□□□□ 0.36
PTN-201ENST00000348225 IGKV1D-16P01601 117 aa17.27■□□□□ 0.36
PTN-201ENST00000348225 GNAO1P09471 354 aa17.27■□□□□ 0.36
PTN-201ENST00000348225 EBPQ15125 230 aaKnown RBP17.27■□□□□ 0.36
PTN-201ENST00000348225 ISXQ2M1V0 245 aa17.27■□□□□ 0.36
PTN-201ENST00000348225 CDCP2Q5VXM1 449 aa17.27■□□□□ 0.36
PTN-201ENST00000348225 ZAR1Q86SH2 424 aa17.27■□□□□ 0.36
PTN-201ENST00000348225 LINC00471Q8N535 108 aa17.27■□□□□ 0.36
PTN-201ENST00000348225 SLC5A8Q8N695 610 aa17.27■□□□□ 0.36
PTN-201ENST00000348225 OIT3Q8WWZ8 545 aa17.27■□□□□ 0.36
PTN-201ENST00000348225 MR1Q95460 341 aa17.27■□□□□ 0.36
PTN-201ENST00000348225 LIN37Q96GY3 246 aaPredicted RBP17.27■□□□□ 0.36
PTN-201ENST00000348225 GAL3ST4Q96RP7 486 aa17.27■□□□□ 0.36
PTN-201ENST00000348225 POLR2J2Q9GZM3 115 aaKnown RBP17.27■□□□□ 0.36
PTN-201ENST00000348225 POLR2J3Q9H1A7 115 aaKnown RBP17.27■□□□□ 0.36
PTN-201ENST00000348225 RIBC2Q9H4K1 309 aa17.27■□□□□ 0.36
PTN-201ENST00000348225 KCNE5Q9UJ90 142 aa17.27■□□□□ 0.36
PTN-201ENST00000348225 TRBV4-1A0A0J9YWV2 114 aa17.26■□□□□ 0.35
PTN-201ENST00000348225 SAGE2PA6NJ88 616 aa17.26■□□□□ 0.35
PTN-201ENST00000348225 SLC16A6O15403 523 aa17.26■□□□□ 0.35
PTN-201ENST00000348225 FRS3O43559 492 aa17.26■□□□□ 0.35
PTN-201ENST00000348225 MITFO75030 526 aaPredicted RBP17.26■□□□□ 0.35
PTN-201ENST00000348225 UGT2B11O75310 529 aa17.26■□□□□ 0.35
PTN-201ENST00000348225 ATP12AP54707 1039 aa17.26■□□□□ 0.35
PTN-201ENST00000348225 TPD52P55327 224 aaPredicted RBP17.26■□□□□ 0.35
PTN-201ENST00000348225 PSPHP78330 225 aa17.26■□□□□ 0.35
PTN-201ENST00000348225 IL18R1Q13478 541 aa17.26■□□□□ 0.35
PTN-201ENST00000348225 ZNF141Q15928 474 aa17.26■□□□□ 0.35
PTN-201ENST00000348225 PDZK1Q5T2W1 519 aa17.26■□□□□ 0.35
PTN-201ENST00000348225 LCN10Q6JVE6 187 aa17.26■□□□□ 0.35
PTN-201ENST00000348225 RAB11FIP2Q7L804 512 aa17.26■□□□□ 0.35
PTN-201ENST00000348225 ADIPOR1Q96A54 375 aa17.26■□□□□ 0.35
PTN-201ENST00000348225 MCHR1Q99705 422 aa17.26■□□□□ 0.35
PTN-201ENST00000348225 COL25A1Q9BXS0 654 aaPredicted RBP17.26■□□□□ 0.35
PTN-201ENST00000348225 IRF2BPLQ9H1B7 796 aa17.26■□□□□ 0.35
PTN-201ENST00000348225 ANKRD19PQ9H560 264 aa17.26■□□□□ 0.35
PTN-201ENST00000348225 PARD6AQ9NPB6 346 aa17.26■□□□□ 0.35
PTN-201ENST00000348225 PAPOLBQ9NRJ5 636 aaKnown RBP17.26■□□□□ 0.35
PTN-201ENST00000348225 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.26■□□□□ 0.35
PTN-201ENST00000348225 ENOPH1Q9UHY7 261 aa17.26■□□□□ 0.35
PTN-201ENST00000348225 LOC100130705A0A1B0GUX0 176 aa17.25■□□□□ 0.35
PTN-201ENST00000348225 CLDN24A6NM45 220 aa17.25■□□□□ 0.35
PTN-201ENST00000348225 ITIH1P19827 911 aa17.25■□□□□ 0.35
PTN-201ENST00000348225 RPS6KA3P51812 740 aa17.25■□□□□ 0.35
PTN-201ENST00000348225 ST3GAL3Q11203 375 aa17.25■□□□□ 0.35
PTN-201ENST00000348225 PLEKHM3Q6ZWE6 761 aa17.25■□□□□ 0.35
PTN-201ENST00000348225 C9orf40Q8IXQ3 194 aa17.25■□□□□ 0.35
PTN-201ENST00000348225 C8orf59Q8N0T1 100 aaPredicted RBP17.25■□□□□ 0.35
PTN-201ENST00000348225 ZNF614Q8N883 585 aa17.25■□□□□ 0.35
PTN-201ENST00000348225 ZSCAN1Q8NBB4 408 aa17.25■□□□□ 0.35
PTN-201ENST00000348225 OR9Q2Q8NGE9 314 aa17.25■□□□□ 0.35
PTN-201ENST00000348225 DEPDC7Q96QD5 511 aa17.25■□□□□ 0.35
PTN-201ENST00000348225 WWTR1Q9GZV5 400 aa17.25■□□□□ 0.35
PTN-201ENST00000348225 HOXD1Q9GZZ0 328 aa17.25■□□□□ 0.35
PTN-201ENST00000348225 NXF5Q9H1B4 397 aaKnown RBP17.25■□□□□ 0.35
PTN-201ENST00000348225 CPSF4LA6NMK7 179 aaKnown RBP17.25■□□□□ 0.35
PTN-201ENST00000348225 NPIPB9F8W1W9 429 aa17.25■□□□□ 0.35
PTN-201ENST00000348225 CNOT3O75175 753 aaKnown RBP17.25■□□□□ 0.35
PTN-201ENST00000348225 CSO75390 466 aaKnown RBP17.25■□□□□ 0.35
PTN-201ENST00000348225 OR5F1O95221 314 aa17.25■□□□□ 0.35
PTN-201ENST00000348225 IL33O95760 270 aa17.25■□□□□ 0.35
PTN-201ENST00000348225 CLIC3O95833 236 aa17.25■□□□□ 0.35
PTN-201ENST00000348225 JMJD7P0C870 316 aa17.25■□□□□ 0.35
PTN-201ENST00000348225 CDK4P11802 303 aa17.25■□□□□ 0.35
PTN-201ENST00000348225 CBLP22681 906 aa17.25■□□□□ 0.35
PTN-201ENST00000348225 LCN1P31025 176 aa17.25■□□□□ 0.35
PTN-201ENST00000348225 FOXL2P58012 376 aa17.25■□□□□ 0.35
PTN-201ENST00000348225 MYBPC1Q00872 1141 aa17.25■□□□□ 0.35
PTN-201ENST00000348225 TRAM2Q15035 370 aa17.25■□□□□ 0.35
PTN-201ENST00000348225 ENTPD8Q5MY95 495 aa17.25■□□□□ 0.35
PTN-201ENST00000348225 TMEM154Q6P9G4 183 aa17.25■□□□□ 0.35
PTN-201ENST00000348225 TMEM205Q6UW68 189 aa17.25■□□□□ 0.35
PTN-201ENST00000348225 GRAMD2AQ8IUY3 354 aa17.25■□□□□ 0.35
PTN-201ENST00000348225 CMIPQ8IY22 773 aa17.25■□□□□ 0.35
PTN-201ENST00000348225 AQP11Q8NBQ7 271 aa17.25■□□□□ 0.35
PTN-201ENST00000348225 C17orf47Q8NEP4 570 aa17.25■□□□□ 0.35
PTN-201ENST00000348225 B3GNT7Q8NFL0 401 aa17.25■□□□□ 0.35
PTN-201ENST00000348225 SLC38A4Q969I6 547 aa17.25■□□□□ 0.35
PTN-201ENST00000348225 PMEPA1Q969W9 287 aa17.25■□□□□ 0.35
PTN-201ENST00000348225 LPAR4Q99677 370 aa17.25■□□□□ 0.35
PTN-201ENST00000348225 DDA1Q9BW61 102 aa17.25■□□□□ 0.35
PTN-201ENST00000348225 GABARAPL3Q9BY60 117 aa17.25■□□□□ 0.35
PTN-201ENST00000348225 TESQ9UGI8 421 aaKnown RBP17.25■□□□□ 0.35
PTN-201ENST00000348225 MGAT4BQ9UQ53 548 aa17.25■□□□□ 0.35
PTN-201ENST00000348225 PCDHGB5Q9Y5G0 923 aa17.25■□□□□ 0.35
PTN-201ENST00000348225 WDR87Q6ZQQ6 2873 aa17.24■□□□□ 0.35
PTN-201ENST00000348225 SPEGQ15772 3267 aa17.24■□□□□ 0.35
PTN-201ENST00000348225 SH3PXD2BA1X283 911 aa17.24■□□□□ 0.35
PTN-201ENST00000348225 EIF4E1BA6NMX2 242 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms