RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 C19orf53Q9UNZ5 99 aaPredicted RBP14.38□□□□□ -0.11
UPF3B-202ENST00000345865 GON4LQ3T8J9 2241 aa14.38□□□□□ -0.11
UPF3B-202ENST00000345865 LAMA1P25391 3075 aa14.38□□□□□ -0.11
UPF3B-202ENST00000345865 TMEM129A0AVI4 362 aa14.38□□□□□ -0.11
UPF3B-202ENST00000345865 LRRC72A6NJI9 287 aa14.38□□□□□ -0.11
UPF3B-202ENST00000345865 PEX12O00623 359 aa14.38□□□□□ -0.11
UPF3B-202ENST00000345865 OR5F1O95221 314 aa14.38□□□□□ -0.11
UPF3B-202ENST00000345865 PTTG1O95997 202 aa14.38□□□□□ -0.11
UPF3B-202ENST00000345865 HTR2AP28223 471 aa14.38□□□□□ -0.11
UPF3B-202ENST00000345865 TLX1P31314 330 aaPredicted RBP14.38□□□□□ -0.11
UPF3B-202ENST00000345865 STAT5AP42229 794 aa14.38□□□□□ -0.11
UPF3B-202ENST00000345865 DUSP8Q13202 625 aa14.38□□□□□ -0.11
UPF3B-202ENST00000345865 ZNF542PQ5EBM4 170 aa14.38□□□□□ -0.11
UPF3B-202ENST00000345865 EXOSC6Q5RKV6 272 aaKnown RBP14.38□□□□□ -0.11
UPF3B-202ENST00000345865 RBM12BQ8IXT5 1001 aaKnown RBP14.38□□□□□ -0.11
UPF3B-202ENST00000345865 CAMKVQ8NCB2 501 aa14.38□□□□□ -0.11
UPF3B-202ENST00000345865 OR13H1Q8NG92 308 aa14.38□□□□□ -0.11
UPF3B-202ENST00000345865 GAS2L1Q99501 681 aaPredicted RBP14.38□□□□□ -0.11
UPF3B-202ENST00000345865 ZNF649Q9BS31 505 aa14.38□□□□□ -0.11
UPF3B-202ENST00000345865 ZNF350Q9GZX5 532 aa14.38□□□□□ -0.11
UPF3B-202ENST00000345865 IL21RQ9HBE5 538 aa14.38□□□□□ -0.11
UPF3B-202ENST00000345865 STARD5Q9NSY2 213 aa14.38□□□□□ -0.11
UPF3B-202ENST00000345865 CSNK1G3Q9Y6M4 447 aa14.38□□□□□ -0.11
UPF3B-202ENST00000345865 TDRD6O60522 2096 aaKnown RBP14.37□□□□□ -0.11
UPF3B-202ENST00000345865 SMIM30A4D0T7 59 aa14.37□□□□□ -0.11
UPF3B-202ENST00000345865 H3BQ06 376 aaPredicted RBP14.37□□□□□ -0.11
UPF3B-202ENST00000345865 CYR61O00622 381 aa14.37□□□□□ -0.11
UPF3B-202ENST00000345865 CTSBP07858 339 aa14.37□□□□□ -0.11
UPF3B-202ENST00000345865 CT62P0C5K7 136 aa14.37□□□□□ -0.11
UPF3B-202ENST00000345865 ZGLP1P0C6A0 271 aa14.37□□□□□ -0.11
UPF3B-202ENST00000345865 IMPDH2P12268 514 aa14.37□□□□□ -0.11
UPF3B-202ENST00000345865 CDH11P55287 796 aa14.37□□□□□ -0.11
UPF3B-202ENST00000345865 FXYD6P3P58550 94 aa14.37□□□□□ -0.11
UPF3B-202ENST00000345865 SELENBP1Q13228 472 aa14.37□□□□□ -0.11
UPF3B-202ENST00000345865 LARS2Q15031 903 aaKnown RBP14.37□□□□□ -0.11
UPF3B-202ENST00000345865 ZNF79Q15937 498 aa14.37□□□□□ -0.11
UPF3B-202ENST00000345865 SPATC1Q76KD6 591 aa14.37□□□□□ -0.11
UPF3B-202ENST00000345865 ZNF438Q7Z4V0 828 aa14.37□□□□□ -0.11
UPF3B-202ENST00000345865 LAPTM4BQ86VI4 370 aa14.37□□□□□ -0.11
UPF3B-202ENST00000345865 ZNF761Q86XN6 746 aaPredicted RBP14.37□□□□□ -0.11
UPF3B-202ENST00000345865 TRIM48Q8IWZ4 208 aa14.37□□□□□ -0.11
UPF3B-202ENST00000345865 SAMD14Q8IZD0 417 aaPredicted RBP14.37□□□□□ -0.11
UPF3B-202ENST00000345865 SLC25A46Q96AG3 418 aa14.37□□□□□ -0.11
UPF3B-202ENST00000345865 CEP19Q96LK0 163 aa14.37□□□□□ -0.11
UPF3B-202ENST00000345865 ENKD1Q9H0I2 346 aa14.37□□□□□ -0.11
UPF3B-202ENST00000345865 PIGUQ9H490 435 aa14.37□□□□□ -0.11
UPF3B-202ENST00000345865 CPNE7Q9UBL6 633 aa14.37□□□□□ -0.11
UPF3B-202ENST00000345865 TBC1D24Q9ULP9 559 aa14.37□□□□□ -0.11
UPF3B-202ENST00000345865 COL4A2P08572 1712 aa14.37□□□□□ -0.11
UPF3B-202ENST00000345865 AGR2O95994 175 aa14.37□□□□□ -0.11
UPF3B-202ENST00000345865 TSPAN19P0C672 248 aa14.37□□□□□ -0.11
UPF3B-202ENST00000345865 GABRG2P18507 467 aa14.37□□□□□ -0.11
UPF3B-202ENST00000345865 PSPHP78330 225 aa14.37□□□□□ -0.11
UPF3B-202ENST00000345865 PLAURQ03405 335 aa14.37□□□□□ -0.11
UPF3B-202ENST00000345865 TPBGQ13641 420 aa14.37□□□□□ -0.11
UPF3B-202ENST00000345865 EXOSC7Q15024 291 aaKnown RBP14.37□□□□□ -0.11
UPF3B-202ENST00000345865 PGGHGQ32M88 737 aa14.37□□□□□ -0.11
UPF3B-202ENST00000345865 PLK5Q496M5 336 aa14.37□□□□□ -0.11
UPF3B-202ENST00000345865 CCBE1Q6UXH8 406 aaPredicted RBP14.37□□□□□ -0.11
UPF3B-202ENST00000345865 ABHD13Q7L211 337 aa14.37□□□□□ -0.11
UPF3B-202ENST00000345865 BAHD1Q8TBE0 780 aaPredicted RBP14.37□□□□□ -0.11
UPF3B-202ENST00000345865 OSTF1Q92882 214 aa14.37□□□□□ -0.11
UPF3B-202ENST00000345865 SAMD8Q96LT4 415 aa14.37□□□□□ -0.11
UPF3B-202ENST00000345865 DCLRE1CQ96SD1 692 aaKnown RBP14.37□□□□□ -0.11
UPF3B-202ENST00000345865 PHOX2BQ99453 314 aa14.37□□□□□ -0.11
UPF3B-202ENST00000345865 ARHGAP9Q9BRR9 750 aa14.37□□□□□ -0.11
UPF3B-202ENST00000345865 PLEKHB1Q9UF11 243 aaPredicted RBP14.37□□□□□ -0.11
UPF3B-202ENST00000345865 ZNF232Q9UNY5 417 aa14.37□□□□□ -0.11
UPF3B-202ENST00000345865 SPTBP11277 2137 aa14.37□□□□□ -0.11
UPF3B-202ENST00000345865 TCRBV21S2A2A0A5A6 115 aa14.36□□□□□ -0.11
UPF3B-202ENST00000345865 URADA6NGE7 173 aa14.36□□□□□ -0.11
UPF3B-202ENST00000345865 STK25O00506 426 aa14.36□□□□□ -0.11
UPF3B-202ENST00000345865 ATP1B1P05026 303 aa14.36□□□□□ -0.11
UPF3B-202ENST00000345865 RPS4Y1P22090 263 aaKnown RBP14.36□□□□□ -0.11
UPF3B-202ENST00000345865 IFNA8P32881 189 aa14.36□□□□□ -0.11
UPF3B-202ENST00000345865 SDC2P34741 201 aa14.36□□□□□ -0.11
UPF3B-202ENST00000345865 SHC2P98077 582 aa14.36□□□□□ -0.11
UPF3B-202ENST00000345865 MGAT2Q10469 447 aa14.36□□□□□ -0.11
UPF3B-202ENST00000345865 ZNF155Q12901 538 aaPredicted RBP14.36□□□□□ -0.11
UPF3B-202ENST00000345865 DCST2Q5T1A1 773 aa14.36□□□□□ -0.11
UPF3B-202ENST00000345865 B3GLCTQ6Y288 498 aa14.36□□□□□ -0.11
UPF3B-202ENST00000345865 RIPOR3Q96MK2 946 aa14.36□□□□□ -0.11
UPF3B-202ENST00000345865 MCOLN1Q9GZU1 580 aa14.36□□□□□ -0.11
UPF3B-202ENST00000345865 SIAEQ9HAT2 523 aa14.36□□□□□ -0.11
UPF3B-202ENST00000345865 LYRM4Q9HD34 91 aa14.36□□□□□ -0.11
UPF3B-202ENST00000345865 C20orf141Q9NUB4 165 aa14.36□□□□□ -0.11
UPF3B-202ENST00000345865 TOR4AQ9NXH8 423 aa14.36□□□□□ -0.11
UPF3B-202ENST00000345865 MSRAQ9UJ68 235 aa14.36□□□□□ -0.11
UPF3B-202ENST00000345865 TRAPPC4Q9Y296 219 aa14.36□□□□□ -0.11
UPF3B-202ENST00000345865 FAM183AA6NL82 134 aa14.36□□□□□ -0.11
UPF3B-202ENST00000345865 ATP6V1G1O75348 118 aa14.36□□□□□ -0.11
UPF3B-202ENST00000345865 LYPD3O95274 346 aa14.36□□□□□ -0.11
UPF3B-202ENST00000345865 SLC1A3P43003 542 aa14.36□□□□□ -0.11
UPF3B-202ENST00000345865 MRPS21P82921 87 aaKnown RBP14.36□□□□□ -0.11
UPF3B-202ENST00000345865 FABP5Q01469 135 aa14.36□□□□□ -0.11
UPF3B-202ENST00000345865 HNRNPA0Q13151 305 aaKnown RBP14.36□□□□□ -0.11
UPF3B-202ENST00000345865 FZD5Q13467 585 aa14.36□□□□□ -0.11
UPF3B-202ENST00000345865 BAK1Q16611 211 aa14.36□□□□□ -0.11
UPF3B-202ENST00000345865 PRICKLE4Q2TBC4 344 aa14.36□□□□□ -0.11
UPF3B-202ENST00000345865 MRPL2Q5T653 305 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms