RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.07■□□□□ 0.322e-41■■■■■ 207.1
SMC4-201ENST00000344722 FAM83HQ6ZRV2 1179 aaPredicted RBP17.07■□□□□ 0.32
SMC4-201ENST00000344722 PXT1Q8NFP0 134 aa17.07■□□□□ 0.32
SMC4-201ENST00000344722 OR2T4Q8NH00 348 aa17.07■□□□□ 0.32
SMC4-201ENST00000344722 ACTRT3Q9BYD9 372 aa17.07■□□□□ 0.32
SMC4-201ENST00000344722 GSX2Q9BZM3 304 aa17.07■□□□□ 0.32
SMC4-201ENST00000344722 IL17CQ9P0M4 197 aa17.07■□□□□ 0.32
SMC4-201ENST00000344722 OR6C65A6NJZ3 312 aa17.07■□□□□ 0.32
SMC4-201ENST00000344722 RFXAPO00287 272 aa17.07■□□□□ 0.32
SMC4-201ENST00000344722 SLC31A1O15431 190 aa17.07■□□□□ 0.32
SMC4-201ENST00000344722 EDIL3O43854 480 aa17.07■□□□□ 0.32
SMC4-201ENST00000344722 SORDQ00796 357 aa17.07■□□□□ 0.32
SMC4-201ENST00000344722 CTU2Q2VPK5 515 aaKnown RBP17.07■□□□□ 0.32
SMC4-201ENST00000344722 ZNF709Q8N972 641 aa17.07■□□□□ 0.32
SMC4-201ENST00000344722 ZBTB8AQ96BR9 441 aa17.07■□□□□ 0.32
SMC4-201ENST00000344722 DPH1Q9BZG8 443 aa17.07■□□□□ 0.32
SMC4-201ENST00000344722 SDHAF3Q9NRP4 125 aa17.07■□□□□ 0.32
SMC4-201ENST00000344722 NDRG2Q9UN36 371 aaKnown RBP17.07■□□□□ 0.32
SMC4-201ENST00000344722 RTCAO00442 366 aaKnown RBP17.07■□□□□ 0.32
SMC4-201ENST00000344722 FLI1Q01543 452 aaPredicted RBP17.07■□□□□ 0.32
SMC4-201ENST00000344722 MEPCEQ7L2J0 689 aaKnown RBP17.07■□□□□ 0.32
SMC4-201ENST00000344722 SCARB1Q8WTV0 552 aa17.07■□□□□ 0.32
SMC4-201ENST00000344722 RELTQ969Z4 430 aa17.07■□□□□ 0.32
SMC4-201ENST00000344722 TAS2R16Q9NYV7 291 aa17.07■□□□□ 0.32
SMC4-201ENST00000344722 TMPRSS11EQ9UL52 423 aa17.07■□□□□ 0.32
SMC4-201ENST00000344722 NPC1O15118 1278 aa17.06■□□□□ 0.32
SMC4-201ENST00000344722 HOXC11O43248 304 aaPredicted RBP17.06■□□□□ 0.32
SMC4-201ENST00000344722 GIPRP48546 466 aa17.06■□□□□ 0.32
SMC4-201ENST00000344722 IRF4Q15306 451 aa17.06■□□□□ 0.32
SMC4-201ENST00000344722 MDGA1Q8NFP4 955 aa17.06■□□□□ 0.32
SMC4-201ENST00000344722 STEAP2Q8NFT2 490 aa17.06■□□□□ 0.32
SMC4-201ENST00000344722 OR5H2Q8NGV7 314 aa17.06■□□□□ 0.32
SMC4-201ENST00000344722 PRRG4Q9BZD6 226 aa17.06■□□□□ 0.32
SMC4-201ENST00000344722 SLC7A7Q9UM01 511 aa17.06■□□□□ 0.32
SMC4-201ENST00000344722 SRPX2O60687 465 aaPredicted RBP17.06■□□□□ 0.32
SMC4-201ENST00000344722 UBL3O95164 117 aa17.06■□□□□ 0.32
SMC4-201ENST00000344722 CD79BP40259 229 aa17.06■□□□□ 0.32
SMC4-201ENST00000344722 ALDH3B1P43353 468 aa17.06■□□□□ 0.32
SMC4-201ENST00000344722 IER5LQ5T953 404 aa17.06■□□□□ 0.32
SMC4-201ENST00000344722 CBARPQ8N350 705 aaPredicted RBP17.06■□□□□ 0.32
SMC4-201ENST00000344722 C1QTNF2Q9BXJ5 285 aa17.06■□□□□ 0.32
SMC4-201ENST00000344722 AMBRA1Q9C0C7 1298 aa17.06■□□□□ 0.32
SMC4-201ENST00000344722 DPEP2Q9H4A9 486 aa17.06■□□□□ 0.32
SMC4-201ENST00000344722 S100A11P31949 105 aa17.06■□□□□ 0.32
SMC4-201ENST00000344722 FLT3LGP49771 235 aa17.06■□□□□ 0.32
SMC4-201ENST00000344722 ERVK-21P61565 698 aa17.06■□□□□ 0.32
SMC4-201ENST00000344722 IL20RBQ6UXL0 311 aa17.06■□□□□ 0.32
SMC4-201ENST00000344722 STK35Q8TDR2 534 aa17.06■□□□□ 0.32
SMC4-201ENST00000344722 FOXRED1Q96CU9 486 aaPredicted RBP17.06■□□□□ 0.32
SMC4-201ENST00000344722 SLC25A44Q96H78 314 aaPredicted RBP17.06■□□□□ 0.32
SMC4-201ENST00000344722 ZBED3Q96IU2 234 aaPredicted RBP17.06■□□□□ 0.32
SMC4-201ENST00000344722 AP1S3Q96PC3 154 aa17.06■□□□□ 0.32
SMC4-201ENST00000344722 J3KTA2 159 aa17.06■□□□□ 0.32
SMC4-201ENST00000344722 WDPCPO95876 746 aa17.06■□□□□ 0.32
SMC4-201ENST00000344722 RPS2P15880 293 aaKnown RBP17.06■□□□□ 0.32
SMC4-201ENST00000344722 ZNF169Q14929 603 aaPredicted RBP17.06■□□□□ 0.32
SMC4-201ENST00000344722 RBMS2Q15434 407 aaKnown RBP17.06■□□□□ 0.32
SMC4-201ENST00000344722 ZNF585AQ6P3V2 769 aa17.06■□□□□ 0.32
SMC4-201ENST00000344722 COMTD1Q86VU5 262 aa17.06■□□□□ 0.32
SMC4-201ENST00000344722 SERPINA12Q8IW75 414 aa17.06■□□□□ 0.32
SMC4-201ENST00000344722 MFSD6LQ8IWD5 586 aa17.06■□□□□ 0.32
SMC4-201ENST00000344722 PIANPQ8IYJ0 282 aa17.06■□□□□ 0.32
SMC4-201ENST00000344722 TMEM130Q8N3G9 435 aa17.06■□□□□ 0.32
SMC4-201ENST00000344722 KREMEN2Q8NCW0 462 aa17.06■□□□□ 0.32
SMC4-201ENST00000344722 OR4E2Q8NGC2 313 aa17.06■□□□□ 0.32
SMC4-201ENST00000344722 C4orf36Q96KX1 117 aa17.06■□□□□ 0.32
SMC4-201ENST00000344722 PKMYT1Q99640 499 aa17.06■□□□□ 0.32
SMC4-201ENST00000344722 CYP8B1Q9UNU6 501 aa17.06■□□□□ 0.32
SMC4-201ENST00000344722 MN1Q10571 1320 aaPredicted RBP17.06■□□□□ 0.32
SMC4-201ENST00000344722 GAPDHSO14556 408 aaPredicted RBP17.06■□□□□ 0.32
SMC4-201ENST00000344722 ZNF254O75437 659 aa17.06■□□□□ 0.32
SMC4-201ENST00000344722 RPS19P39019 145 aaKnown RBP17.06■□□□□ 0.32
SMC4-201ENST00000344722 HTR3AP46098 478 aa17.06■□□□□ 0.32
SMC4-201ENST00000344722 ID2Q02363 134 aa17.06■□□□□ 0.32
SMC4-201ENST00000344722 SELENBP1Q13228 472 aa17.06■□□□□ 0.32
SMC4-201ENST00000344722 PGGHGQ32M88 737 aa17.06■□□□□ 0.32
SMC4-201ENST00000344722 LEG1Q6P5S2 330 aa17.06■□□□□ 0.32
SMC4-201ENST00000344722 KLK6Q92876 244 aa17.06■□□□□ 0.32
SMC4-201ENST00000344722 LMF1Q96S06 567 aa17.06■□□□□ 0.32
SMC4-201ENST00000344722 SOX1O00570 391 aaPredicted RBP17.05■□□□□ 0.32
SMC4-201ENST00000344722 AGPAT2O15120 278 aa17.05■□□□□ 0.32
SMC4-201ENST00000344722 NDUFB2O95178 105 aa17.05■□□□□ 0.32
SMC4-201ENST00000344722 GNRHRP30968 328 aa17.05■□□□□ 0.32
SMC4-201ENST00000344722 NKPD1Q17RQ9 610 aa17.05■□□□□ 0.32
SMC4-201ENST00000344722 TSSK4Q6SA08 328 aa17.05■□□□□ 0.32
SMC4-201ENST00000344722 SLC29A4Q7RTT9 530 aa17.05■□□□□ 0.32
SMC4-201ENST00000344722 TERB2Q8NHR7 220 aa17.05■□□□□ 0.32
SMC4-201ENST00000344722 QRSL1Q9H0R6 528 aaKnown RBP17.05■□□□□ 0.32
SMC4-201ENST00000344722 P2RX6O15547 441 aa17.05■□□□□ 0.32
SMC4-201ENST00000344722 EGFP01133 1207 aa17.05■□□□□ 0.32
SMC4-201ENST00000344722 MLIPQ5VWP3 458 aa17.05■□□□□ 0.32
SMC4-201ENST00000344722 SH2D5Q6ZV89 423 aa17.05■□□□□ 0.32
SMC4-201ENST00000344722 SLC51BQ86UW2 128 aa17.05■□□□□ 0.32
SMC4-201ENST00000344722 C16orf70Q9BSU1 422 aa17.05■□□□□ 0.32
SMC4-201ENST00000344722 KLHL42Q9P2K6 505 aa17.05■□□□□ 0.32
SMC4-201ENST00000344722 LAMA4Q16363 1823 aa17.05■□□□□ 0.32
SMC4-201ENST00000344722 PRSS44E7EML9 344 aa17.05■□□□□ 0.32
SMC4-201ENST00000344722 SNRNP70P08621 437 aaKnown RBP17.05■□□□□ 0.32
SMC4-201ENST00000344722 ILKQ13418 452 aa17.05■□□□□ 0.32
SMC4-201ENST00000344722 VASH1Q7L8A9 365 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms