RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 BRD7Q9NPI1 651 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 PPIEQ9UNP9 301 aaKnown RBP9.04□□□□□ -0.96
HOXA1-201ENST00000343060 HS3ST2Q9Y278 367 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 COL4A6Q14031 1691 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 A0A1B0GVC2 190 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 TRABD2BA6NFA1 517 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 A6NIN4 97 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 OLFM2O95897 454 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 WNT1P04628 370 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 CHRM4P08173 479 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 GIPP09681 153 aaPredicted RBP9.04□□□□□ -0.96
HOXA1-201ENST00000343060 ANKRD34CP0C6C1 535 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 SAGP10523 405 aaPredicted RBP9.04□□□□□ -0.96
HOXA1-201ENST00000343060 CYBAP13498 195 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 KELP23276 732 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 BSGP35613 385 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 FUT5Q11128 374 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 HSPB3Q12988 150 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 TRAM2Q15035 370 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 ELFN2Q5R3F8 820 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 FAM69AQ5T7M9 428 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 PRAMEF8Q5VWM4 474 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 PRAMEF7Q5VXH5 474 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 ZNF620Q6ZNG0 422 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 TAS1R1Q7RTX1 841 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 HSD11B1LQ7Z5J1 315 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 HSD17B13Q7Z5P4 300 aaPredicted RBP9.04□□□□□ -0.96
HOXA1-201ENST00000343060 MEX3DQ86XN8 651 aaKnown RBP9.04□□□□□ -0.96
HOXA1-201ENST00000343060 GID4Q8IVV7 300 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 ACBD7Q8N6N7 88 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 ZNF527Q8NB42 609 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 BEST4Q8NFU0 473 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 SUN3Q8TAQ9 357 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 PIGXQ8TBF5 258 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 RGMAQ96B86 450 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 C12orf66Q96MD2 445 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 ALG8Q9BVK2 526 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 C1QTNF6Q9BXI9 259 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 TEX12Q9BXU0 123 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 MFRPQ9BY79 579 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 ABCG4Q9H172 646 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 ZCCHC4Q9H5U6 513 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 TRIM36Q9NQ86 728 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 HINT3Q9NQE9 182 aaKnown RBP9.04□□□□□ -0.96
HOXA1-201ENST00000343060 TDP1Q9NUW8 608 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 AHSPQ9NZD4 102 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 CNIH4Q9P003 139 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 FAM8A1Q9UBU6 413 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 CLEC4EQ9ULY5 219 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 CAMK2AQ9UQM7 478 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 BACE2Q9Y5Z0 518 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 COL4A3Q01955 1670 aa9.04□□□□□ -0.96
HOXA1-201ENST00000343060 DNAH12Q6ZR08 3092 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 OBSL1O75147 1896 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 SOCS6O14544 535 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 MT-ND4P03905 459 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 NR2F1P10589 423 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 CPN1P15169 458 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 TYRP1P17643 537 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 PDHA2P29803 388 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 VIPR1P32241 457 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 CD70P32970 193 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 KHKP50053 298 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 B2MP61769 119 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 MEF2AQ02078 507 aaPredicted RBP9.03□□□□□ -0.96
HOXA1-201ENST00000343060 RPL6Q02878 288 aaKnown RBP9.03□□□□□ -0.96
HOXA1-201ENST00000343060 PLD1Q13393 1074 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 SLC25A35Q3KQZ1 300 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 CLEC12AQ5QGZ9 265 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 KANSL1Q7Z3B3 1105 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 TMEM150AQ86TG1 271 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 FAM129CQ86XR2 697 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 ZNF740Q8NDX6 193 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 OR11G2Q8NGC1 345 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 FIBINQ8TAL6 211 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 SP7Q8TDD2 431 aaPredicted RBP9.03□□□□□ -0.96
HOXA1-201ENST00000343060 FAM46AQ96IP4 442 aaKnown RBP9.03□□□□□ -0.96
HOXA1-201ENST00000343060 CXorf58Q96LI9 332 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 SGIP1Q9BQI5 828 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 SPRTNQ9H040 489 aaPredicted RBP9.03□□□□□ -0.96
HOXA1-201ENST00000343060 IFT46Q9NQC8 304 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 INPP5EQ9NRR6 644 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 NLGN3Q9NZ94 848 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 ABRACLQ9P1F3 81 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 FBXL3Q9UKT7 428 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 OR2M5A3KFT3 312 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 ZNF749O43361 778 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 PI15O43692 258 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 GALR3O60755 368 aaPredicted RBP9.03□□□□□ -0.96
HOXA1-201ENST00000343060 ADAMTS4O75173 837 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 HMGN1P05114 100 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 HOXB3P14651 431 aaPredicted RBP9.03□□□□□ -0.96
HOXA1-201ENST00000343060 TYRP14679 529 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 CTSOP43234 321 aaPredicted RBP9.03□□□□□ -0.96
HOXA1-201ENST00000343060 ARFIP1P53367 373 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 FAM27D1Q5T7N8 215 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 METTL11BQ5VVY1 283 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 Q6ZTK2 550 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 RRM2BQ7LG56 351 aa9.03□□□□□ -0.96
HOXA1-201ENST00000343060 DEFB132Q7Z7B7 95 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms