RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 SPARCP09486 303 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 ACP2P11117 423 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 EIF1AXP47813 144 aaKnown RBP6.76□□□□□ -1.33
VCAN-202ENST00000342785 HHEXQ03014 270 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 GPR19Q15760 415 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 RAB30Q15771 203 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 PUS10Q3MIT2 529 aaKnown RBP6.76□□□□□ -1.33
VCAN-202ENST00000342785 TTLL10Q6ZVT0 673 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 BCDIN3DQ7Z5W3 292 aaKnown RBP6.76□□□□□ -1.33
VCAN-202ENST00000342785 GKN2Q86XP6 184 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 RBM45Q8IUH3 476 aaKnown RBP6.76□□□□□ -1.33
VCAN-202ENST00000342785 MSRB3Q8IXL7 192 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 ARMC10Q8N2F6 343 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 DNAJA4Q8WW22 397 aaPredicted RBP6.76□□□□□ -1.33
VCAN-202ENST00000342785 GLIPR2Q9H4G4 154 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 PRSS16Q9NQE7 514 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 SLC6A13Q9NSD5 602 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 ACER3Q9NUN7 267 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 NPIPA1Q9UND3 350 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 MAU2Q9Y6X3 613 aa6.76□□□□□ -1.33
VCAN-202ENST00000342785 LOC105369274A0A096LPK9 316 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 SCO2O43819 266 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 LILRB3O75022 631 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 GYPBP06028 91 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 ZNF20P17024 532 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 PRKCAP17252 672 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 ELAVL4P26378 380 aaKnown RBP6.75□□□□□ -1.33
VCAN-202ENST00000342785 SOX9P48436 509 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 SLX4IPQ5VYV7 408 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 LHX8Q68G74 356 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 FBXO46Q6PJ61 603 aaPredicted RBP6.75□□□□□ -1.33
VCAN-202ENST00000342785 OR4N4Q8N0Y3 316 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 C1QTNF2Q9BXJ5 285 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 TRPV4Q9HBA0 871 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 TM7SF3Q9NS93 570 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 NUDT15Q9NV35 164 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 ACTR10Q9NZ32 417 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 SERTAD3Q9UJW9 196 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 CORINQ9Y5Q5 1042 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 SPTA1P02549 2419 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 ETHE1O95571 254 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 H2AFB2P0C5Z0 115 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 S1PR1P21453 382 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 ELOCQ15369 112 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 PYCR3Q53H96 274 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 KLHL26Q53HC5 615 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 ZNF385BQ569K4 471 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 ENTPD8Q5MY95 495 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 AGAP7PQ5VUJ5 663 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 PYHIN1Q6K0P9 492 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 RTL10Q7L3V2 364 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 C12orf40Q86WS4 652 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 FCAMRQ8WWV6 532 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 RHNO1Q9BSD3 238 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 ZDHHC5Q9C0B5 715 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 RBM7Q9Y580 266 aaKnown RBP6.75□□□□□ -1.33
VCAN-202ENST00000342785 IER3IP1Q9Y5U9 82 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 A0A0A6YYC8 382 aaPredicted RBP6.75□□□□□ -1.33
VCAN-202ENST00000342785 C5orf51A6NDU8 294 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 ZNF726A6NNF4 738 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 FAM171A2A8MVW0 826 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 I3L1I5 382 aaPredicted RBP6.75□□□□□ -1.33
VCAN-202ENST00000342785 K7ESM1 405 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 TSPAN4O14817 238 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 POLR1CO15160 346 aaPredicted RBP6.75□□□□□ -1.33
VCAN-202ENST00000342785 PRKRAO75569 313 aaKnown RBP6.75□□□□□ -1.33
VCAN-202ENST00000342785 GPR75O95800 540 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 FUT1P19526 365 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 AQP6Q13520 282 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 OXA1LQ15070 435 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 RPE65Q16518 533 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 BCL2L15Q5TBC7 163 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 USP53Q70EK8 1073 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 USP51Q70EK9 711 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 LNX2Q8N448 690 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 OR2T35Q8NGX2 323 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 OR2T4Q8NH00 348 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 FKBP10Q96AY3 582 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 EID2BQ96D98 161 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 JSRP1Q96MG2 331 aaPredicted RBP6.75□□□□□ -1.33
VCAN-202ENST00000342785 AMDHD1Q96NU7 426 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 PRR14Q9BWN1 585 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 ALOXE3Q9BYJ1 711 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 ACTR6Q9GZN1 396 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 RXFP3Q9NSD7 469 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 VNN3Q9NY84 501 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 MRPL15Q9P015 296 aaKnown RBP6.75□□□□□ -1.33
VCAN-202ENST00000342785 ATG4BQ9Y4P1 393 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 LOC100509620A0A075B734 347 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 A8MVJ9 347 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 EIF1AYO14602 144 aaKnown RBP6.75□□□□□ -1.33
VCAN-202ENST00000342785 THEGLP0DJG4 465 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 APEX1P27695 318 aaKnown RBP6.75□□□□□ -1.33
VCAN-202ENST00000342785 CAV3P56539 151 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 CTXN1P60606 82 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 CSNK1G2P78368 415 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 KCNJ10P78508 379 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 EXOSC7Q15024 291 aaKnown RBP6.75□□□□□ -1.33
VCAN-202ENST00000342785 PRAMEF17Q5VTA0 474 aa6.75□□□□□ -1.33
VCAN-202ENST00000342785 GLT8D1Q68CQ7 371 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms