RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 GPR107Q5VW38 600 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 NKAIN4Q8IVV8 208 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 EID2Q8N6I1 236 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 ZNF615Q8N8J6 731 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 FAM181AQ8N9Y4 354 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 OR2I1PQ8NGU4 316 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 C16orf52Q8NHV5 167 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 IPCEF1Q8WWN9 437 aaPredicted RBP18.54■□□□□ 0.56
RTN1-202ENST00000342503 ISOC1Q96CN7 298 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 DPYSL5Q9BPU6 564 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 PLCXD1Q9NUJ7 323 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 PTTG2Q9NZH5 202 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 PCDHGA10Q9Y5H3 936 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 A0A1W2PQM1 296 aa18.53■□□□□ 0.56
RTN1-202ENST00000342503 CDHR4A6H8M9 788 aa18.53■□□□□ 0.56
RTN1-202ENST00000342503 C17orf105B2RV13 164 aa18.53■□□□□ 0.56
RTN1-202ENST00000342503 YKT6O15498 198 aa18.53■□□□□ 0.56
RTN1-202ENST00000342503 RGS10O43665 173 aa18.53■□□□□ 0.56
RTN1-202ENST00000342503 MT-ND2P03891 347 aa18.53■□□□□ 0.56
RTN1-202ENST00000342503 RPLP0P05388 317 aaKnown RBP18.53■□□□□ 0.56
RTN1-202ENST00000342503 GUSBP08236 651 aa18.53■□□□□ 0.56
RTN1-202ENST00000342503 GKN3PP0CG01 181 aa18.53■□□□□ 0.56
RTN1-202ENST00000342503 PRG2P13727 222 aa18.53■□□□□ 0.56
RTN1-202ENST00000342503 SLC5A2P31639 672 aa18.53■□□□□ 0.56
RTN1-202ENST00000342503 ALDH6A1Q02252 535 aaKnown RBP18.53■□□□□ 0.56
RTN1-202ENST00000342503 EMX1Q04741 257 aaPredicted RBP18.53■□□□□ 0.56
RTN1-202ENST00000342503 COX10Q12887 443 aa18.53■□□□□ 0.56
RTN1-202ENST00000342503 SLX4IPQ5VYV7 408 aa18.53■□□□□ 0.56
RTN1-202ENST00000342503 GTF2IRD2BQ6EKJ0 949 aa18.53■□□□□ 0.56
RTN1-202ENST00000342503 ZNF730Q6ZMV8 503 aa18.53■□□□□ 0.56
RTN1-202ENST00000342503 GTF2IRD2Q86UP8 949 aa18.53■□□□□ 0.56
RTN1-202ENST00000342503 RANBP3LQ86VV4 465 aaPredicted RBP18.53■□□□□ 0.56
RTN1-202ENST00000342503 MEX3DQ86XN8 651 aaKnown RBP18.53■□□□□ 0.56
RTN1-202ENST00000342503 TMEM105Q8N8V8 129 aa18.53■□□□□ 0.56
RTN1-202ENST00000342503 GNPDA2Q8TDQ7 276 aa18.53■□□□□ 0.56
RTN1-202ENST00000342503 TSLPQ969D9 159 aa18.53■□□□□ 0.56
RTN1-202ENST00000342503 MUL1Q969V5 352 aa18.53■□□□□ 0.56
RTN1-202ENST00000342503 CCNB1IP1Q9NPC3 277 aa18.53■□□□□ 0.56
RTN1-202ENST00000342503 PNO1Q9NRX1 252 aaKnown RBP18.53■□□□□ 0.56
RTN1-202ENST00000342503 PCDHGB1Q9Y5G3 927 aa18.53■□□□□ 0.56
RTN1-202ENST00000342503 BCAS1O75363 584 aaPredicted RBP18.52■□□□□ 0.56
RTN1-202ENST00000342503 ITIH1P19827 911 aa18.52■□□□□ 0.56
RTN1-202ENST00000342503 DCKP27707 260 aa18.52■□□□□ 0.56
RTN1-202ENST00000342503 PEX19P40855 299 aa18.52■□□□□ 0.56
RTN1-202ENST00000342503 MAP2K4P45985 399 aa18.52■□□□□ 0.56
RTN1-202ENST00000342503 DECR1Q16698 335 aa18.52■□□□□ 0.56
RTN1-202ENST00000342503 MINDY4Q4G0A6 757 aa18.52■□□□□ 0.56
RTN1-202ENST00000342503 YOD1Q5VVQ6 348 aaPredicted RBP18.52■□□□□ 0.56
RTN1-202ENST00000342503 QSOX2Q6ZRP7 698 aa18.52■□□□□ 0.56
RTN1-202ENST00000342503 AHSA2Q719I0 299 aa18.52■□□□□ 0.56
RTN1-202ENST00000342503 RCBTB1Q8NDN9 531 aa18.52■□□□□ 0.56
RTN1-202ENST00000342503 PTPMT1Q8WUK0 201 aaPredicted RBP18.52■□□□□ 0.56
RTN1-202ENST00000342503 ITPAQ9BY32 194 aa18.52■□□□□ 0.56
RTN1-202ENST00000342503 A0A1B0GX78 115 aa18.52■□□□□ 0.55
RTN1-202ENST00000342503 A8MUA0 341 aa18.52■□□□□ 0.55
RTN1-202ENST00000342503 MRPS14O60783 128 aaKnown RBP18.52■□□□□ 0.55
RTN1-202ENST00000342503 CT45A8P0DMV1 189 aa18.52■□□□□ 0.55
RTN1-202ENST00000342503 CT45A9P0DMV2 189 aa18.52■□□□□ 0.55
RTN1-202ENST00000342503 HTR2AP28223 471 aa18.52■□□□□ 0.55
RTN1-202ENST00000342503 IFNGR2P38484 337 aa18.52■□□□□ 0.55
RTN1-202ENST00000342503 TUBA3CQ13748 450 aa18.52■□□□□ 0.55
RTN1-202ENST00000342503 NNATQ16517 81 aa18.52■□□□□ 0.55
RTN1-202ENST00000342503 CT45A2Q5DJT8 189 aa18.52■□□□□ 0.55
RTN1-202ENST00000342503 PDZK1Q5T2W1 519 aa18.52■□□□□ 0.55
RTN1-202ENST00000342503 ARHGAP40Q5TG30 622 aa18.52■□□□□ 0.55
RTN1-202ENST00000342503 C12orf73Q69YU5 71 aa18.52■□□□□ 0.55
RTN1-202ENST00000342503 PTCHD4Q6ZW05 846 aa18.52■□□□□ 0.55
RTN1-202ENST00000342503 ARHGAP22Q7Z5H3 698 aa18.52■□□□□ 0.55
RTN1-202ENST00000342503 OR7G1Q8NGA0 311 aa18.52■□□□□ 0.55
RTN1-202ENST00000342503 FAR1Q8WVX9 515 aa18.52■□□□□ 0.55
RTN1-202ENST00000342503 ACOT11Q8WXI4 607 aaPredicted RBP18.52■□□□□ 0.55
RTN1-202ENST00000342503 RNF31Q96EP0 1072 aa18.52■□□□□ 0.55
RTN1-202ENST00000342503 Q9N2J8 555 aa18.52■□□□□ 0.55
RTN1-202ENST00000342503 PSORS1C1Q9UIG5 152 aa18.52■□□□□ 0.55
RTN1-202ENST00000342503 SLC7A7Q9UM01 511 aa18.52■□□□□ 0.55
RTN1-202ENST00000342503 FER1L5A0AVI2 2057 aa18.51■□□□□ 0.55
RTN1-202ENST00000342503 IGKV3D-11A0A0A0MRZ8 115 aa18.51■□□□□ 0.55
RTN1-202ENST00000342503 ZNF701M0R085 212 aaPredicted RBP18.51■□□□□ 0.55
RTN1-202ENST00000342503 MPZL2O60487 215 aa18.51■□□□□ 0.55
RTN1-202ENST00000342503 INMTO95050 263 aa18.51■□□□□ 0.55
RTN1-202ENST00000342503 GSTM3P21266 225 aa18.51■□□□□ 0.55
RTN1-202ENST00000342503 EFNA3P52797 238 aa18.51■□□□□ 0.55
RTN1-202ENST00000342503 NUDT6P53370 316 aa18.51■□□□□ 0.55
RTN1-202ENST00000342503 RHAGQ02094 409 aa18.51■□□□□ 0.55
RTN1-202ENST00000342503 PLAURQ03405 335 aa18.51■□□□□ 0.55
RTN1-202ENST00000342503 VWA2Q5GFL6 755 aa18.51■□□□□ 0.55
RTN1-202ENST00000342503 RRM2BQ7LG56 351 aa18.51■□□□□ 0.55
RTN1-202ENST00000342503 PRSS48Q7RTY5 328 aa18.51■□□□□ 0.55
RTN1-202ENST00000342503 TMEM151BQ8IW70 566 aa18.51■□□□□ 0.55
RTN1-202ENST00000342503 ZNF321PQ8N8H1 164 aa18.51■□□□□ 0.55
RTN1-202ENST00000342503 DTWD2Q8NBA8 298 aa18.51■□□□□ 0.55
RTN1-202ENST00000342503 PIGXQ8TBF5 258 aa18.51■□□□□ 0.55
RTN1-202ENST00000342503 GGHQ92820 318 aa18.51■□□□□ 0.55
RTN1-202ENST00000342503 SENP5Q96HI0 755 aaPredicted RBP18.51■□□□□ 0.55
RTN1-202ENST00000342503 MPP4Q96JB8 637 aa18.51■□□□□ 0.55
RTN1-202ENST00000342503 POLR2J2Q9GZM3 115 aaKnown RBP18.51■□□□□ 0.55
RTN1-202ENST00000342503 NAA50Q9GZZ1 169 aaKnown RBP18.51■□□□□ 0.55
RTN1-202ENST00000342503 LRRN3Q9H3W5 708 aa18.51■□□□□ 0.55
RTN1-202ENST00000342503 ARMC7Q9H6L4 198 aa18.51■□□□□ 0.55
RTN1-202ENST00000342503 SYNDIG1Q9H7V2 258 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms