RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 DUSP22Q9NRW4 184 aa14□□□□□ -0.17
VAPA-201ENST00000340541 GIN1Q9NXP7 522 aa14□□□□□ -0.17
VAPA-201ENST00000340541 ACAD8Q9UKU7 415 aa14□□□□□ -0.17
VAPA-201ENST00000340541 SLC6A5Q9Y345 797 aa14□□□□□ -0.17
VAPA-201ENST00000340541 USH1CQ9Y6N9 552 aa14□□□□□ -0.17
VAPA-201ENST00000340541 CSMD2Q7Z408 3487 aa14□□□□□ -0.17
VAPA-201ENST00000340541 POLQO75417 2590 aa13.99□□□□□ -0.17
VAPA-201ENST00000340541 PRSS51A0A1B0GVH4 220 aa13.99□□□□□ -0.17
VAPA-201ENST00000340541 C9JVG2 144 aa13.99□□□□□ -0.17
VAPA-201ENST00000340541 E9PBE3 544 aa13.99□□□□□ -0.17
VAPA-201ENST00000340541 CFLARO15519 480 aa13.99□□□□□ -0.17
VAPA-201ENST00000340541 SCO2O43819 266 aa13.99□□□□□ -0.17
VAPA-201ENST00000340541 ACVR2AP27037 513 aa13.99□□□□□ -0.17
VAPA-201ENST00000340541 DPY19L1Q2PZI1 675 aa13.99□□□□□ -0.17
VAPA-201ENST00000340541 SPDYE7PQ495Y7 208 aa13.99□□□□□ -0.17
VAPA-201ENST00000340541 DCST1Q5T197 706 aa13.99□□□□□ -0.17
VAPA-201ENST00000340541 CCNJQ5T5M9 372 aa13.99□□□□□ -0.17
VAPA-201ENST00000340541 WLSQ5T9L3 541 aa13.99□□□□□ -0.17
VAPA-201ENST00000340541 VASNQ6EMK4 673 aa13.99□□□□□ -0.17
VAPA-201ENST00000340541 ZNF585AQ6P3V2 769 aa13.99□□□□□ -0.17
VAPA-201ENST00000340541 FIGNL1Q6PIW4 674 aa13.99□□□□□ -0.17
VAPA-201ENST00000340541 CLEC4FQ8N1N0 589 aa13.99□□□□□ -0.17
VAPA-201ENST00000340541 COX18Q8N8Q8 333 aa13.99□□□□□ -0.17
VAPA-201ENST00000340541 FADS6Q8N9I5 356 aa13.99□□□□□ -0.17
VAPA-201ENST00000340541 OR4C3Q8NH37 302 aa13.99□□□□□ -0.17
VAPA-201ENST00000340541 JADE3Q92613 823 aa13.99□□□□□ -0.17
VAPA-201ENST00000340541 CDS1Q92903 461 aa13.99□□□□□ -0.17
VAPA-201ENST00000340541 MOAP1Q96BY2 351 aa13.99□□□□□ -0.17
VAPA-201ENST00000340541 SDCCAG3Q96C92 435 aa13.99□□□□□ -0.17
VAPA-201ENST00000340541 TIMP4Q99727 224 aa13.99□□□□□ -0.17
VAPA-201ENST00000340541 BTBD2Q9BX70 525 aa13.99□□□□□ -0.17
VAPA-201ENST00000340541 ACTRT3Q9BYD9 372 aa13.99□□□□□ -0.17
VAPA-201ENST00000340541 MCCC2Q9HCC0 563 aa13.99□□□□□ -0.17
VAPA-201ENST00000340541 INTS9Q9NV88 658 aaKnown RBP13.99□□□□□ -0.17
VAPA-201ENST00000340541 PCDHGB3Q9Y5G1 929 aa13.99□□□□□ -0.17
VAPA-201ENST00000340541 KCNE3Q9Y6H6 103 aa13.99□□□□□ -0.17
VAPA-201ENST00000340541 ARHGAP21Q5T5U3 1957 aa13.98□□□□□ -0.17
VAPA-201ENST00000340541 C15orf38-AP3S2A0A0A6YYH1 394 aa13.98□□□□□ -0.17
VAPA-201ENST00000340541 FIGNL2A6NMB9 653 aa13.98□□□□□ -0.17
VAPA-201ENST00000340541 ZIC3O60481 467 aa13.98□□□□□ -0.17
VAPA-201ENST00000340541 NGFRP08138 427 aa13.98□□□□□ -0.17
VAPA-201ENST00000340541 BMP7P18075 431 aa13.98□□□□□ -0.17
VAPA-201ENST00000340541 SRD5A2P31213 254 aa13.98□□□□□ -0.17
VAPA-201ENST00000340541 SOAT1P35610 550 aa13.98□□□□□ -0.17
VAPA-201ENST00000340541 ZFP36L2P47974 494 aaKnown RBP13.98□□□□□ -0.17
VAPA-201ENST00000340541 DGKQP52824 942 aa13.98□□□□□ -0.17
VAPA-201ENST00000340541 RPS26P62854 115 aaKnown RBP13.98□□□□□ -0.17
VAPA-201ENST00000340541 POU6F2P78424 691 aaPredicted RBP13.98□□□□□ -0.17
VAPA-201ENST00000340541 TOMM20Q15388 145 aa13.98□□□□□ -0.17
VAPA-201ENST00000340541 PDCD4Q53EL6 469 aaKnown RBP13.98□□□□□ -0.17
VAPA-201ENST00000340541 ANXA8L1Q5VT79 327 aa13.98□□□□□ -0.17
VAPA-201ENST00000340541 NXNQ6DKJ4 435 aa13.98□□□□□ -0.17
VAPA-201ENST00000340541 MARCH3Q86UD3 253 aa13.98□□□□□ -0.17
VAPA-201ENST00000340541 ULK2Q8IYT8 1036 aa13.98□□□□□ -0.17
VAPA-201ENST00000340541 OR2M3Q8NG83 312 aa13.98□□□□□ -0.17
VAPA-201ENST00000340541 OR4A15Q8NGL6 344 aa13.98□□□□□ -0.17
VAPA-201ENST00000340541 LILRB4Q8NHJ6 448 aa13.98□□□□□ -0.17
VAPA-201ENST00000340541 CKAP2Q8WWK9 683 aa13.98□□□□□ -0.17
VAPA-201ENST00000340541 MARK4Q96L34 752 aa13.98□□□□□ -0.17
VAPA-201ENST00000340541 TTYH2Q9BSA4 534 aa13.98□□□□□ -0.17
VAPA-201ENST00000340541 UGT2B28Q9BY64 529 aa13.98□□□□□ -0.17
VAPA-201ENST00000340541 PRDM14Q9GZV8 571 aa13.98□□□□□ -0.17
VAPA-201ENST00000340541 SDR39U1Q9NRG7 319 aaPredicted RBP13.98□□□□□ -0.17
VAPA-201ENST00000340541 PPP4R1LQ9P1A2 415 aa13.98□□□□□ -0.17
VAPA-201ENST00000340541 MRPS18CQ9Y3D5 142 aaKnown RBP13.98□□□□□ -0.17
VAPA-201ENST00000340541 IGLV3-32A0A0A0MS00 114 aa13.97□□□□□ -0.17
VAPA-201ENST00000340541 RNF103-CHMP3A0A140T963 221 aa13.97□□□□□ -0.17
VAPA-201ENST00000340541 ALG1L2C9J202 215 aa13.97□□□□□ -0.17
VAPA-201ENST00000340541 DIAPH2O60879 1101 aa13.97□□□□□ -0.17
VAPA-201ENST00000340541 WDR1O75083 606 aa13.97□□□□□ -0.17
VAPA-201ENST00000340541 OXSR1O95747 527 aaPredicted RBP13.97□□□□□ -0.17
VAPA-201ENST00000340541 C1QCP02747 245 aa13.97□□□□□ -0.17
VAPA-201ENST00000340541 GLI4P10075 376 aa13.97□□□□□ -0.17
VAPA-201ENST00000340541 IDO1P14902 403 aa13.97□□□□□ -0.17
VAPA-201ENST00000340541 TBXA2RP21731 343 aa13.97□□□□□ -0.17
VAPA-201ENST00000340541 CHRNB4P30926 498 aa13.97□□□□□ -0.17
VAPA-201ENST00000340541 S100A3P33764 101 aa13.97□□□□□ -0.17
VAPA-201ENST00000340541 GFRA1P56159 465 aa13.97□□□□□ -0.17
VAPA-201ENST00000340541 NUP107P57740 925 aa13.97□□□□□ -0.17
VAPA-201ENST00000340541 SPNS3Q6ZMD2 512 aa13.97□□□□□ -0.17
VAPA-201ENST00000340541 MEX3BQ6ZN04 569 aaKnown RBP13.97□□□□□ -0.17
VAPA-201ENST00000340541 C6orf120Q7Z4R8 191 aa13.97□□□□□ -0.17
VAPA-201ENST00000340541 OR5D16Q8NGK9 328 aa13.97□□□□□ -0.17
VAPA-201ENST00000340541 GOT1L1Q8NHS2 421 aaPredicted RBP13.97□□□□□ -0.17
VAPA-201ENST00000340541 ADAMTS15Q8TE58 950 aa13.97□□□□□ -0.17
VAPA-201ENST00000340541 RND1Q92730 232 aa13.97□□□□□ -0.17
VAPA-201ENST00000340541 CCDC115Q96NT0 180 aa13.97□□□□□ -0.17
VAPA-201ENST00000340541 OR7D2Q96RA2 312 aa13.97□□□□□ -0.17
VAPA-201ENST00000340541 DSN1Q9H410 356 aa13.97□□□□□ -0.17
VAPA-201ENST00000340541 SLC24A3Q9HC58 644 aa13.97□□□□□ -0.17
VAPA-201ENST00000340541 MED11Q9P086 117 aa13.97□□□□□ -0.17
VAPA-201ENST00000340541 BTNL2Q9UIR0 455 aa13.97□□□□□ -0.17
VAPA-201ENST00000340541 FAF1Q9UNN5 650 aaPredicted RBP13.97□□□□□ -0.17
VAPA-201ENST00000340541 KIAA1549Q9HCM3 1950 aa13.96□□□□□ -0.17
VAPA-201ENST00000340541 F8P00451 2351 aa13.96□□□□□ -0.17
VAPA-201ENST00000340541 TGDSO95455 350 aa13.96□□□□□ -0.17
VAPA-201ENST00000340541 CPSF4O95639 269 aaKnown RBP13.96□□□□□ -0.17
VAPA-201ENST00000340541 ANGPTL1O95841 491 aa13.96□□□□□ -0.17
VAPA-201ENST00000340541 ACTL6AO96019 429 aa13.96□□□□□ -0.17
VAPA-201ENST00000340541 PGRP06401 933 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms