RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 RSBN1Q5VWQ0 802 aaPredicted RBP12□□□□□ -0.49
LIN54-201ENST00000340417 BLOC1S3Q6QNY0 202 aa12□□□□□ -0.49
LIN54-201ENST00000340417 TMEM207Q6UWW9 146 aa12□□□□□ -0.49
LIN54-201ENST00000340417 FAM217AQ8IXS0 508 aa12□□□□□ -0.49
LIN54-201ENST00000340417 TIGD4Q8IY51 512 aa12□□□□□ -0.49
LIN54-201ENST00000340417 LINC00615Q96LM1 132 aaPredicted RBP12□□□□□ -0.49
LIN54-201ENST00000340417 LRRC3BQ96PB8 259 aa12□□□□□ -0.49
LIN54-201ENST00000340417 TMPRSS11EQ9UL52 423 aa12□□□□□ -0.49
LIN54-201ENST00000340417 LRCH1Q9Y2L9 728 aa12□□□□□ -0.49
LIN54-201ENST00000340417 D6RAR5 112 aa11.99□□□□□ -0.49
LIN54-201ENST00000340417 ZNF264O43296 627 aa11.99□□□□□ -0.49
LIN54-201ENST00000340417 ITGA10O75578 1167 aa11.99□□□□□ -0.49
LIN54-201ENST00000340417 RASAL1O95294 804 aa11.99□□□□□ -0.49
LIN54-201ENST00000340417 LCKP06239 509 aa11.99□□□□□ -0.49
LIN54-201ENST00000340417 KDELR2P33947 212 aa11.99□□□□□ -0.49
LIN54-201ENST00000340417 GPR4P46093 362 aa11.99□□□□□ -0.49
LIN54-201ENST00000340417 SPATS1Q496A3 300 aa11.99□□□□□ -0.49
LIN54-201ENST00000340417 GGTA1PQ4G0N0 100 aa11.99□□□□□ -0.49
LIN54-201ENST00000340417 GOT1L1Q8NHS2 421 aaPredicted RBP11.99□□□□□ -0.49
LIN54-201ENST00000340417 CHTF18Q8WVB6 975 aa11.99□□□□□ -0.49
LIN54-201ENST00000340417 MRPL39Q9NYK5 338 aaKnown RBP11.99□□□□□ -0.49
LIN54-201ENST00000340417 PRAMEF33A0A0G2JMD5 474 aa11.99□□□□□ -0.49
LIN54-201ENST00000340417 UTS2O95399 124 aa11.99□□□□□ -0.49
LIN54-201ENST00000340417 HBMQ6B0K9 141 aa11.99□□□□□ -0.49
LIN54-201ENST00000340417 NAGSQ8N159 534 aa11.99□□□□□ -0.49
LIN54-201ENST00000340417 SLC2A12Q8TD20 617 aa11.99□□□□□ -0.49
LIN54-201ENST00000340417 ACSS1Q9NUB1 689 aaPredicted RBP11.99□□□□□ -0.49
LIN54-201ENST00000340417 FZD6O60353 706 aa11.99□□□□□ -0.49
LIN54-201ENST00000340417 PRKRAO75569 313 aaKnown RBP11.99□□□□□ -0.49
LIN54-201ENST00000340417 PSMA1P25786 263 aaKnown RBP11.99□□□□□ -0.49
LIN54-201ENST00000340417 ACADVLP49748 655 aa11.99□□□□□ -0.49
LIN54-201ENST00000340417 PFN3P60673 137 aa11.99□□□□□ -0.49
LIN54-201ENST00000340417 CCNIQ14094 377 aa11.99□□□□□ -0.49
LIN54-201ENST00000340417 WBP2NLQ6ICG8 309 aa11.99□□□□□ -0.49
LIN54-201ENST00000340417 SPRED1Q7Z699 444 aa11.99□□□□□ -0.49
LIN54-201ENST00000340417 UBTD2Q8WUN7 234 aa11.99□□□□□ -0.49
LIN54-201ENST00000340417 GPC6Q9Y625 555 aaPredicted RBP11.99□□□□□ -0.49
LIN54-201ENST00000340417 S1PR1P21453 382 aa11.99□□□□□ -0.49
LIN54-201ENST00000340417 LTB4RQ15722 352 aa11.99□□□□□ -0.49
LIN54-201ENST00000340417 FAM199XQ6PEV8 388 aaPredicted RBP11.99□□□□□ -0.49
LIN54-201ENST00000340417 MED25Q71SY5 747 aa11.99□□□□□ -0.49
LIN54-201ENST00000340417 AMER2Q8N7J2 671 aa11.99□□□□□ -0.49
LIN54-201ENST00000340417 CANT1Q8WVQ1 401 aa11.99□□□□□ -0.49
LIN54-201ENST00000340417 ZNF775Q96BV0 537 aaPredicted RBP11.99□□□□□ -0.49
LIN54-201ENST00000340417 LMF2Q9BU23 707 aaKnown RBP11.99□□□□□ -0.49
LIN54-201ENST00000340417 NRSN2Q9GZP1 204 aa11.99□□□□□ -0.49
LIN54-201ENST00000340417 IFT46Q9NQC8 304 aa11.99□□□□□ -0.49
LIN54-201ENST00000340417 NUMA1Q14980 2115 aa11.99□□□□□ -0.49
LIN54-201ENST00000340417 TRAV17A0A0B4J275 112 aa11.99□□□□□ -0.49
LIN54-201ENST00000340417 A6NIZ1 184 aa11.99□□□□□ -0.49
LIN54-201ENST00000340417 PTHP01270 115 aa11.99□□□□□ -0.49
LIN54-201ENST00000340417 CHN2P52757 468 aa11.99□□□□□ -0.49
LIN54-201ENST00000340417 RAP1BP61224 184 aa11.99□□□□□ -0.49
LIN54-201ENST00000340417 RAP1AP62834 184 aa11.99□□□□□ -0.49
LIN54-201ENST00000340417 GALNTL5Q7Z4T8 443 aa11.99□□□□□ -0.49
LIN54-201ENST00000340417 JAGN1Q8N5M9 183 aa11.99□□□□□ -0.49
LIN54-201ENST00000340417 SGCDQ92629 289 aa11.99□□□□□ -0.49
LIN54-201ENST00000340417 MROQ9BYG7 248 aa11.99□□□□□ -0.49
LIN54-201ENST00000340417 TRIM8Q9BZR9 551 aa11.99□□□□□ -0.49
LIN54-201ENST00000340417 B3GNT4Q9C0J1 378 aa11.99□□□□□ -0.49
LIN54-201ENST00000340417 MBD1Q9UIS9 605 aaPredicted RBP11.99□□□□□ -0.49
LIN54-201ENST00000340417 SLC43A1O75387 559 aa11.98□□□□□ -0.49
LIN54-201ENST00000340417 ENPP1P22413 925 aa11.98□□□□□ -0.49
LIN54-201ENST00000340417 AIMP2Q13155 320 aaKnown RBP11.98□□□□□ -0.49
LIN54-201ENST00000340417 PDK3Q15120 406 aa11.98□□□□□ -0.49
LIN54-201ENST00000340417 ALG10Q5BKT4 473 aa11.98□□□□□ -0.49
LIN54-201ENST00000340417 ABI3BPQ7Z7G0 1075 aa11.98□□□□□ -0.49
LIN54-201ENST00000340417 THAP4Q8WY91 577 aa11.98□□□□□ -0.49
LIN54-201ENST00000340417 PINK1Q9BXM7 581 aa11.98□□□□□ -0.49
LIN54-201ENST00000340417 NT5DC2Q9H857 520 aa11.98□□□□□ -0.49
LIN54-201ENST00000340417 SLC7A7Q9UM01 511 aa11.98□□□□□ -0.49
LIN54-201ENST00000340417 YARS2Q9Y2Z4 477 aaKnown RBP11.98□□□□□ -0.49
LIN54-201ENST00000340417 CELA2BP08218 269 aaPredicted RBP11.98□□□□□ -0.49
LIN54-201ENST00000340417 LEG1Q6P5S2 330 aa11.98□□□□□ -0.49
LIN54-201ENST00000340417 ZNF687Q8N1G0 1237 aa11.98□□□□□ -0.49
LIN54-201ENST00000340417 OR9K2Q8NGE7 335 aa11.98□□□□□ -0.49
LIN54-201ENST00000340417 APOBEC4Q8WW27 367 aaKnown RBP11.98□□□□□ -0.49
LIN54-201ENST00000340417 TTTY10Q9BZA0 68 aa11.98□□□□□ -0.49
LIN54-201ENST00000340417 KLHL21Q9UJP4 597 aa11.98□□□□□ -0.49
LIN54-201ENST00000340417 IDH3BO43837 385 aa11.98□□□□□ -0.49
LIN54-201ENST00000340417 SLC14A1Q13336 389 aa11.98□□□□□ -0.49
LIN54-201ENST00000340417 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.98□□□□□ -0.49
LIN54-201ENST00000340417 ARHGAP11AQ6P4F7 1023 aa11.98□□□□□ -0.49
LIN54-201ENST00000340417 TRIB1Q96RU8 372 aa11.98□□□□□ -0.49
LIN54-201ENST00000340417 MCUBQ9NWR8 336 aa11.98□□□□□ -0.49
LIN54-201ENST00000340417 DNAJC27Q9NZQ0 273 aa11.98□□□□□ -0.49
LIN54-201ENST00000340417 MRPL3P09001 348 aaKnown RBP11.98□□□□□ -0.49
LIN54-201ENST00000340417 RHCEP18577 417 aa11.98□□□□□ -0.49
LIN54-201ENST00000340417 PTDSS1P48651 473 aaKnown RBP11.98□□□□□ -0.49
LIN54-201ENST00000340417 YTHDF3Q7Z739 585 aaKnown RBP11.98□□□□□ -0.49
LIN54-201ENST00000340417 FGF11Q92914 225 aa11.98□□□□□ -0.49
LIN54-201ENST00000340417 SPTSSAQ969W0 71 aa11.98□□□□□ -0.49
LIN54-201ENST00000340417 ERVMER34-1Q9H9K5 563 aa11.98□□□□□ -0.49
LIN54-201ENST00000340417 MED11Q9P086 117 aa11.98□□□□□ -0.49
LIN54-201ENST00000340417 ZNF451Q9Y4E5 1061 aa11.98□□□□□ -0.49
LIN54-201ENST00000340417 COMMD3-BMI1R4GMX3 469 aa11.98□□□□□ -0.49
LIN54-201ENST00000340417 LRIT2A6NDA9 550 aa11.98□□□□□ -0.49
LIN54-201ENST00000340417 NRG2O14511 850 aaPredicted RBP11.98□□□□□ -0.49
LIN54-201ENST00000340417 HRO43593 1189 aa11.98□□□□□ -0.49
LIN54-201ENST00000340417 MTHFD2P13995 350 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms