RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 ATPIF1Q9UII2 106 aa11.19□□□□□ -0.62
CCDC144CP-201ENST00000340196 MRPS7Q9Y2R9 242 aaKnown RBP11.19□□□□□ -0.62
CCDC144CP-201ENST00000340196 SLC9A3R1O14745 358 aaPredicted RBP11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 NDUFS4O43181 175 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 CD3GP09693 182 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 EN2P19622 333 aaPredicted RBP11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 SRP54P61011 504 aaKnown RBP11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 TNK1Q13470 666 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 MINDY4Q4G0A6 757 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 PSRC1Q6PGN9 363 aaPredicted RBP11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 IKBIPQ70UQ0 350 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 GPR135Q8IZ08 494 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 LINC01555Q8NAE3 123 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 HERVK_113Q902F9 699 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 DACT3Q96B18 629 aaPredicted RBP11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 PRRC1Q96M27 445 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 KCNJ15Q99712 375 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 MARVELD1Q9BSK0 173 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 C1QTNF6Q9BXI9 259 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 ABCG5Q9H222 651 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 OR52A5Q9H2C5 316 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 NEUROD4Q9HD90 331 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 KLHL1Q9NR64 748 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 IMP3Q9NV31 184 aaKnown RBP11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 EVA1BQ9NVM1 165 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 PTGFRNQ9P2B2 879 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 KLHL21Q9UJP4 597 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 SLC9A8Q9Y2E8 581 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 ARHGEF9O43307 516 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 LZTS3O60299 673 aaPredicted RBP11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 NOS1APO75052 506 aaPredicted RBP11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 CLUP10909 449 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 ZNF250P15622 560 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 BTCP35070 178 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 MC3RP41968 323 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 CCR6P51684 374 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 SLC16A1P53985 500 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 CAMK1Q14012 370 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 POU4F3Q15319 338 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 SLC25A35Q3KQZ1 300 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 MZT2BQ6NZ67 158 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 PLBD1Q6P4A8 553 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 IZUMO1Q8IYV9 350 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 OR8H3Q8N146 312 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 DUSP18Q8NEJ0 188 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 LRRC20Q8TCA0 184 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 ARRDC3Q96B67 414 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 ORAI1Q96D31 301 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 NUS1Q96E22 293 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 CNRIP1Q96F85 164 aaPredicted RBP11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 LRRC3BQ96PB8 259 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 ABHD1Q96SE0 405 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 ORAI3Q9BRQ5 295 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 UQCC2Q9BRT2 126 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 MRPL15Q9P015 296 aaKnown RBP11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 PRKAG2Q9UGJ0 569 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 FBXL4Q9UKA2 621 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 ATG4BQ9Y4P1 393 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 LRRK1Q38SD2 2015 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 NOTCH4Q99466 2003 aa11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 SNRNP200O75643 2136 aaKnown RBP11.18□□□□□ -0.62
CCDC144CP-201ENST00000340196 IGKV1-8A0A0C4DH67 115 aa11.17□□□□□ -0.62
CCDC144CP-201ENST00000340196 TRDV1A0A1B0GX56 115 aa11.17□□□□□ -0.62
CCDC144CP-201ENST00000340196 CHP2O43745 196 aa11.17□□□□□ -0.62
CCDC144CP-201ENST00000340196 HCN1O60741 890 aa11.17□□□□□ -0.62
CCDC144CP-201ENST00000340196 PDE9AO76083 593 aa11.17□□□□□ -0.62
CCDC144CP-201ENST00000340196 HLA-DQB1P01920 261 aa11.17□□□□□ -0.62
CCDC144CP-201ENST00000340196 E2F1Q01094 437 aa11.17□□□□□ -0.62
CCDC144CP-201ENST00000340196 MAB21L1Q13394 359 aa11.17□□□□□ -0.62
CCDC144CP-201ENST00000340196 ZNF311Q5JNZ3 666 aa11.17□□□□□ -0.62
CCDC144CP-201ENST00000340196 CD200R1LQ6Q8B3 271 aa11.17□□□□□ -0.62
CCDC144CP-201ENST00000340196 ARL9Q6T311 187 aa11.17□□□□□ -0.62
CCDC144CP-201ENST00000340196 KRT78Q8N1N4 520 aa11.17□□□□□ -0.62
CCDC144CP-201ENST00000340196 OR4D9Q8NGE8 314 aa11.17□□□□□ -0.62
CCDC144CP-201ENST00000340196 AKAP1Q92667 903 aaKnown RBP eCLIP11.17□□□□□ -0.62
CCDC144CP-201ENST00000340196 SAMD8Q96LT4 415 aa11.17□□□□□ -0.62
CCDC144CP-201ENST00000340196 BBS4Q96RK4 519 aa11.17□□□□□ -0.62
CCDC144CP-201ENST00000340196 FAM83CQ9BQN1 747 aa11.17□□□□□ -0.62
CCDC144CP-201ENST00000340196 FGF20Q9NP95 211 aaPredicted RBP11.17□□□□□ -0.62
CCDC144CP-201ENST00000340196 WSB2Q9NYS7 404 aaPredicted RBP11.17□□□□□ -0.62
CCDC144CP-201ENST00000340196 ZNF624Q9P2J8 865 aaPredicted RBP11.17□□□□□ -0.62
CCDC144CP-201ENST00000340196 NUP50Q9UKX7 468 aa11.17□□□□□ -0.62
CCDC144CP-201ENST00000340196 MGAT4AQ9UM21 535 aa11.17□□□□□ -0.62
CCDC144CP-201ENST00000340196 RASD1Q9Y272 281 aa11.17□□□□□ -0.62
CCDC144CP-201ENST00000340196 TEX51A0A1B0GUA7 166 aa11.17□□□□□ -0.62
CCDC144CP-201ENST00000340196 ORC5O43913 435 aa11.17□□□□□ -0.62
CCDC144CP-201ENST00000340196 GYPBP06028 91 aa11.17□□□□□ -0.62
CCDC144CP-201ENST00000340196 FGF9P31371 208 aaPredicted RBP11.17□□□□□ -0.62
CCDC144CP-201ENST00000340196 ACVR1BP36896 505 aa11.17□□□□□ -0.62
CCDC144CP-201ENST00000340196 SLC3A1Q07837 685 aa11.17□□□□□ -0.62
CCDC144CP-201ENST00000340196 MRPL28Q13084 256 aaKnown RBP11.17□□□□□ -0.62
CCDC144CP-201ENST00000340196 AGERQ15109 404 aa11.17□□□□□ -0.62
CCDC144CP-201ENST00000340196 KLHL12Q53G59 568 aa11.17□□□□□ -0.62
CCDC144CP-201ENST00000340196 ENTPD8Q5MY95 495 aa11.17□□□□□ -0.62
CCDC144CP-201ENST00000340196 NUDT13Q86X67 352 aa11.17□□□□□ -0.62
CCDC144CP-201ENST00000340196 RFLNBQ8N5W9 214 aa11.17□□□□□ -0.62
CCDC144CP-201ENST00000340196 OR9A2Q8NGT5 310 aa11.17□□□□□ -0.62
CCDC144CP-201ENST00000340196 SUN3Q8TAQ9 357 aa11.17□□□□□ -0.62
CCDC144CP-201ENST00000340196 MED18Q9BUE0 208 aa11.17□□□□□ -0.62
CCDC144CP-201ENST00000340196 OSGEPL1Q9H4B0 414 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms