RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 NPIPA2E9PIF3 369 aa13.9□□□□□ -0.19
UBE3B-201ENST00000340074 NPIPA3F8WFD2 350 aa13.9□□□□□ -0.19
UBE3B-201ENST00000340074 AQP7O14520 342 aa13.9□□□□□ -0.19
UBE3B-201ENST00000340074 HCN1O60741 890 aa13.9□□□□□ -0.19
UBE3B-201ENST00000340074 CBR3O75828 277 aa13.9□□□□□ -0.19
UBE3B-201ENST00000340074 ANP32DO95626 131 aa13.9□□□□□ -0.19
UBE3B-201ENST00000340074 OXSR1O95747 527 aaPredicted RBP13.9□□□□□ -0.19
UBE3B-201ENST00000340074 OR12D1P0DN82 309 aa13.9□□□□□ -0.19
UBE3B-201ENST00000340074 ENDOUP21128 410 aaKnown RBP13.9□□□□□ -0.19
UBE3B-201ENST00000340074 ATP6V1C1P21283 382 aa13.9□□□□□ -0.19
UBE3B-201ENST00000340074 TBXA2RP21731 343 aa13.9□□□□□ -0.19
UBE3B-201ENST00000340074 CLK3P49761 638 aaKnown RBP13.9□□□□□ -0.19
UBE3B-201ENST00000340074 CASP6P55212 293 aa13.9□□□□□ -0.19
UBE3B-201ENST00000340074 C6orf10Q5SRN2 563 aa13.9□□□□□ -0.19
UBE3B-201ENST00000340074 SLC2A7Q6PXP3 512 aa13.9□□□□□ -0.19
UBE3B-201ENST00000340074 RNF130Q86XS8 419 aa13.9□□□□□ -0.19
UBE3B-201ENST00000340074 PNPT1Q8TCS8 783 aaKnown RBP13.9□□□□□ -0.19
UBE3B-201ENST00000340074 DUSP19Q8WTR2 217 aa13.9□□□□□ -0.19
UBE3B-201ENST00000340074 GTF2H4Q92759 462 aa13.9□□□□□ -0.19
UBE3B-201ENST00000340074 RAB8BQ92930 207 aa13.9□□□□□ -0.19
UBE3B-201ENST00000340074 SPDL1Q96EA4 605 aa13.9□□□□□ -0.19
UBE3B-201ENST00000340074 SDF2Q99470 211 aa13.9□□□□□ -0.19
UBE3B-201ENST00000340074 RABEP2Q9H5N1 569 aa13.9□□□□□ -0.19
UBE3B-201ENST00000340074 ZNF385DQ9H6B1 395 aa13.9□□□□□ -0.19
UBE3B-201ENST00000340074 SDHAF3Q9NRP4 125 aa13.9□□□□□ -0.19
UBE3B-201ENST00000340074 UBQLN4Q9NRR5 601 aa13.9□□□□□ -0.19
UBE3B-201ENST00000340074 PPP4R1LQ9P1A2 415 aa13.9□□□□□ -0.19
UBE3B-201ENST00000340074 SPRR3Q9UBC9 169 aa13.9□□□□□ -0.19
UBE3B-201ENST00000340074 TNFRSF10DQ9UBN6 386 aa13.9□□□□□ -0.19
UBE3B-201ENST00000340074 NCOA6Q14686 2063 aaPredicted RBP13.89□□□□□ -0.19
UBE3B-201ENST00000340074 UTP20O75691 2785 aaKnown RBP13.89□□□□□ -0.19
UBE3B-201ENST00000340074 NPIPA5A0A0B4J1W7 369 aa13.89□□□□□ -0.19
UBE3B-201ENST00000340074 NPIPA7E9PJI5 369 aa13.89□□□□□ -0.19
UBE3B-201ENST00000340074 PRRG2O14669 202 aa13.89□□□□□ -0.19
UBE3B-201ENST00000340074 ANGPTL1O95841 491 aa13.89□□□□□ -0.19
UBE3B-201ENST00000340074 TPOP07202 933 aa13.89□□□□□ -0.19
UBE3B-201ENST00000340074 NGFRP08138 427 aa13.89□□□□□ -0.19
UBE3B-201ENST00000340074 NPIPA8P0DM63 369 aa13.89□□□□□ -0.19
UBE3B-201ENST00000340074 CAPN3P20807 821 aa13.89□□□□□ -0.19
UBE3B-201ENST00000340074 LCN1P31025 176 aa13.89□□□□□ -0.19
UBE3B-201ENST00000340074 KHKP50053 298 aa13.89□□□□□ -0.19
UBE3B-201ENST00000340074 ARFIP2P53365 341 aa13.89□□□□□ -0.19
UBE3B-201ENST00000340074 GTDC1Q4AE62 458 aa13.89□□□□□ -0.19
UBE3B-201ENST00000340074 EIPR1Q53HC9 387 aa13.89□□□□□ -0.19
UBE3B-201ENST00000340074 WIPI1Q5MNZ9 446 aaPredicted RBP13.89□□□□□ -0.19
UBE3B-201ENST00000340074 METTL21CQ5VZV1 264 aa13.89□□□□□ -0.19
UBE3B-201ENST00000340074 YRDCQ86U90 279 aaKnown RBP13.89□□□□□ -0.19
UBE3B-201ENST00000340074 CD163Q86VB7 1156 aa13.89□□□□□ -0.19
UBE3B-201ENST00000340074 DOLPP1Q86YN1 238 aa13.89□□□□□ -0.19
UBE3B-201ENST00000340074 CHDHQ8NE62 594 aaPredicted RBP13.89□□□□□ -0.19
UBE3B-201ENST00000340074 FAM83FQ8NEG4 500 aaPredicted RBP13.89□□□□□ -0.19
UBE3B-201ENST00000340074 NEIL3Q8TAT5 605 aa13.89□□□□□ -0.19
UBE3B-201ENST00000340074 FAM57AQ8TBR7 257 aa13.89□□□□□ -0.19
UBE3B-201ENST00000340074 ZFP90Q8TF47 636 aa13.89□□□□□ -0.19
UBE3B-201ENST00000340074 XAGE5Q8WWM1 108 aa13.89□□□□□ -0.19
UBE3B-201ENST00000340074 RELTQ969Z4 430 aa13.89□□□□□ -0.19
UBE3B-201ENST00000340074 PHF12Q96QT6 1004 aa13.89□□□□□ -0.19
UBE3B-201ENST00000340074 SLC52A3Q9NQ40 469 aa13.89□□□□□ -0.19
UBE3B-201ENST00000340074 TMEM45AQ9NWC5 275 aa13.89□□□□□ -0.19
UBE3B-201ENST00000340074 LRRK2Q5S007 2527 aa13.88□□□□□ -0.19
UBE3B-201ENST00000340074 OR14I1A6ND48 311 aa13.88□□□□□ -0.19
UBE3B-201ENST00000340074 ALG1L2C9J202 215 aa13.88□□□□□ -0.19
UBE3B-201ENST00000340074 HMGN4O00479 90 aa13.88□□□□□ -0.19
UBE3B-201ENST00000340074 CCL21O00585 134 aa13.88□□□□□ -0.19
UBE3B-201ENST00000340074 SCDO00767 359 aa13.88□□□□□ -0.19
UBE3B-201ENST00000340074 AGR2O95994 175 aa13.88□□□□□ -0.19
UBE3B-201ENST00000340074 ZCCHC18P0CG32 403 aa13.88□□□□□ -0.19
UBE3B-201ENST00000340074 RNF224P0DH78 156 aa13.88□□□□□ -0.19
UBE3B-201ENST00000340074 HPGDP15428 266 aa13.88□□□□□ -0.19
UBE3B-201ENST00000340074 DCTP40126 519 aa13.88□□□□□ -0.19
UBE3B-201ENST00000340074 C17orf67Q0P5P2 114 aa13.88□□□□□ -0.19
UBE3B-201ENST00000340074 ARHGAP11BQ3KRB8 267 aa13.88□□□□□ -0.19
UBE3B-201ENST00000340074 FLYWCH1Q4VC44 716 aa13.88□□□□□ -0.19
UBE3B-201ENST00000340074 COX20Q5RI15 118 aa13.88□□□□□ -0.19
UBE3B-201ENST00000340074 HEPHL1Q6MZM0 1159 aa13.88□□□□□ -0.19
UBE3B-201ENST00000340074 OLIG3Q7RTU3 272 aa13.88□□□□□ -0.19
UBE3B-201ENST00000340074 C16orf62Q7Z3J2 963 aa13.88□□□□□ -0.19
UBE3B-201ENST00000340074 FADS6Q8N9I5 356 aa13.88□□□□□ -0.19
UBE3B-201ENST00000340074 GATSQ8NAP1 163 aa13.88□□□□□ -0.19
UBE3B-201ENST00000340074 OR4K17Q8NGC6 315 aa13.88□□□□□ -0.19
UBE3B-201ENST00000340074 AURKBQ96GD4 344 aaPredicted RBP13.88□□□□□ -0.19
UBE3B-201ENST00000340074 PAIP1Q9H074 479 aaKnown RBP13.88□□□□□ -0.19
UBE3B-201ENST00000340074 DSN1Q9H410 356 aa13.88□□□□□ -0.19
UBE3B-201ENST00000340074 EXD2Q9NVH0 621 aa13.88□□□□□ -0.19
UBE3B-201ENST00000340074 MED11Q9P086 117 aa13.88□□□□□ -0.19
UBE3B-201ENST00000340074 SLC6A5Q9Y345 797 aa13.88□□□□□ -0.19
UBE3B-201ENST00000340074 PCDHB14Q9Y5E9 798 aa13.88□□□□□ -0.19
UBE3B-201ENST00000340074 NDUFB5O43674 189 aa13.87□□□□□ -0.19
UBE3B-201ENST00000340074 KRT75O95678 551 aa13.87□□□□□ -0.19
UBE3B-201ENST00000340074 AK1P00568 194 aa13.87□□□□□ -0.19
UBE3B-201ENST00000340074 SRD5A2P31213 254 aa13.87□□□□□ -0.19
UBE3B-201ENST00000340074 FUT5Q11128 374 aa13.87□□□□□ -0.19
UBE3B-201ENST00000340074 GXYLT1Q4G148 440 aa13.87□□□□□ -0.19
UBE3B-201ENST00000340074 EMC4Q5J8M3 183 aa13.87□□□□□ -0.19
UBE3B-201ENST00000340074 PAGE3Q5JUK9 113 aa13.87□□□□□ -0.19
UBE3B-201ENST00000340074 ATAD3BQ5T9A4 648 aa13.87□□□□□ -0.19
UBE3B-201ENST00000340074 C3P1Q6ZMU1 363 aa13.87□□□□□ -0.19
UBE3B-201ENST00000340074 OR2M3Q8NG83 312 aa13.87□□□□□ -0.19
UBE3B-201ENST00000340074 OR5M9Q8NGP3 310 aa13.87□□□□□ -0.19
UBE3B-201ENST00000340074 SSC4DQ8WTU2 575 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms