RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 SLC29A3Q9BZD2 475 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 DNAJB11Q9UBS4 358 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 GOLT1BQ9Y3E0 138 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 FER1L5A0AVI2 2057 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 MAP3K4Q9Y6R4 1608 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 MIA3Q5JRA6 1907 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 HSPB6O14558 160 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 SPATA31C1P0DKV0 1188 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 AGTR2P50052 363 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 EBPQ15125 230 aaKnown RBP12.19□□□□□ -0.46
USP47-202ENST00000339865 ZNF791Q3KP31 576 aaPredicted RBP12.19□□□□□ -0.46
USP47-202ENST00000339865 TMEM200AQ86VY9 491 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 ELP4Q96EB1 424 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 FAM71F1Q96KD3 344 aaPredicted RBP12.19□□□□□ -0.46
USP47-202ENST00000339865 NICN1Q9BSH3 213 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 OR2C1O95371 312 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 DBHP09172 617 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 GHRHRQ02643 423 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 EMX2Q04743 252 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 OR5W2Q8NH69 310 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 CAPNS2Q96L46 248 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 ACTRT3Q9BYD9 372 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 AGXT2Q9BYV1 514 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 ROBO2Q9HCK4 1378 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 FAM171A2A8MVW0 826 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 DFFBO76075 338 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 ABOP16442 354 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 MPPED2Q15777 294 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 ADIRFQ15847 76 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 FUT10Q6P4F1 479 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 OR1M1Q8NGA1 313 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 OR4K13Q8NH42 304 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 PLD4Q96BZ4 506 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 RAB39BQ96DA2 213 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 TRMT2BQ96GJ1 504 aaKnown RBP12.19□□□□□ -0.46
USP47-202ENST00000339865 PRRT1Q99946 306 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 ALG8Q9BVK2 526 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 ADAMTS6Q9UKP5 1117 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 SERPINA2P20848 420 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 S100A7P31151 101 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 RHBDL3P58872 404 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 DLX2Q07687 328 aaPredicted RBP12.19□□□□□ -0.46
USP47-202ENST00000339865 COTL1Q14019 142 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 IL17AQ16552 155 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 KBTBD6Q86V97 674 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 SPARTQ8N0X7 666 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 SUV39H2Q9H5I1 410 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 EIF4EP06730 217 aaKnown RBP12.18□□□□□ -0.46
USP47-202ENST00000339865 CARD18P57730 90 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 APOOLQ6UXV4 268 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 SFXN5Q8TD22 340 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 HAPLN3Q96S86 360 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 CD244Q9BZW8 370 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 AIG1Q9NVV5 245 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 DERAQ9Y315 318 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 PRSS44E7EML9 344 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 TMEM63AO94886 807 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 CLDN6P56747 220 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 CRB1P82279 1406 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 EXOSC6Q5RKV6 272 aaKnown RBP12.18□□□□□ -0.46
USP47-202ENST00000339865 RBMS3Q6XE24 437 aaKnown RBP12.18□□□□□ -0.46
USP47-202ENST00000339865 SPATA31E1Q6ZUB1 1445 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 TFGQ92734 400 aaPredicted RBP12.18□□□□□ -0.46
USP47-202ENST00000339865 KCNMB3Q9NPA1 279 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 MED16Q9Y2X0 877 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 LCATP04180 440 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 RBPJQ06330 500 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 GPR50Q13585 617 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 HIST2H3AQ71DI3 136 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 ADGRA1Q86SQ6 560 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 OR4M1Q8NGD0 313 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 A0A0D9SG52 128 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 B4GALT4O60513 344 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 CD79AP11912 226 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 ZNF43P17038 809 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 USF1P22415 310 aaPredicted RBP12.18□□□□□ -0.46
USP47-202ENST00000339865 SHMT1P34896 483 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 GRM5P41594 1212 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 GABRA4P48169 554 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 LSMEM2Q8N112 164 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 GABRDO14764 452 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 SURF4O15260 269 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 DNAJB6O75190 326 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 CNTN5O94779 1100 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 FPGSQ05932 587 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 GAB1Q13480 694 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 FAM69AQ5T7M9 428 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 DMBX1Q8NFW5 382 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 LILRB4Q8NHJ6 448 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 BPIFA2Q96DR5 249 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 FCRL3Q96P31 734 aaPredicted RBP12.18□□□□□ -0.46
USP47-202ENST00000339865 WDR18Q9BV38 432 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 SAP130Q9H0E3 1048 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 IKZF4Q9H2S9 585 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 TUSC2O75896 110 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 SYPP08247 313 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 SEC61A1P61619 476 aaKnown RBP12.18□□□□□ -0.46
USP47-202ENST00000339865 ADARB1P78563 741 aaKnown RBP12.18□□□□□ -0.46
USP47-202ENST00000339865 LTC4SQ16873 150 aa12.18□□□□□ -0.46
USP47-202ENST00000339865 OR10R2Q8NGX6 335 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms