RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 RASSF5Q8WWW0 418 aa7.72□□□□□ -1.17
HPS4-201ENST00000336873 AHCYL2Q96HN2 611 aaKnown RBP7.72□□□□□ -1.17
HPS4-201ENST00000336873 OR7D2Q96RA2 312 aa7.72□□□□□ -1.17
HPS4-201ENST00000336873 C1QTNF7Q9BXJ2 289 aa7.72□□□□□ -1.17
HPS4-201ENST00000336873 SLC25A18Q9H1K4 315 aa7.72□□□□□ -1.17
HPS4-201ENST00000336873 HCN2Q9UL51 889 aa7.72□□□□□ -1.17
HPS4-201ENST00000336873 CYP8B1Q9UNU6 501 aa7.72□□□□□ -1.17
HPS4-201ENST00000336873 ZNF236Q9UL36 1845 aa7.72□□□□□ -1.17
HPS4-201ENST00000336873 MEIOCA2RUB1 952 aa7.72□□□□□ -1.17
HPS4-201ENST00000336873 SH3D21A4FU49 640 aa7.72□□□□□ -1.17
HPS4-201ENST00000336873 PRAMEF25A6NGN4 478 aa7.72□□□□□ -1.17
HPS4-201ENST00000336873 CCDC85CA6NKD9 419 aa7.72□□□□□ -1.17
HPS4-201ENST00000336873 MEN1O00255 615 aa7.72□□□□□ -1.17
HPS4-201ENST00000336873 FAAHO00519 579 aa7.72□□□□□ -1.17
HPS4-201ENST00000336873 RDH16O75452 317 aa7.72□□□□□ -1.17
HPS4-201ENST00000336873 KHDRBS3O75525 346 aaKnown RBP7.72□□□□□ -1.17
HPS4-201ENST00000336873 ADAP00813 363 aa7.72□□□□□ -1.17
HPS4-201ENST00000336873 JUNBP17275 347 aaPredicted RBP7.72□□□□□ -1.17
HPS4-201ENST00000336873 EIF2DP41214 584 aaKnown RBP7.72□□□□□ -1.17
HPS4-201ENST00000336873 CSNK1G2P78368 415 aa7.72□□□□□ -1.17
HPS4-201ENST00000336873 ZNF45Q02386 682 aa7.72□□□□□ -1.17
HPS4-201ENST00000336873 GNA13Q14344 377 aa7.72□□□□□ -1.17
HPS4-201ENST00000336873 TRAM2Q15035 370 aa7.72□□□□□ -1.17
HPS4-201ENST00000336873 CXXC5Q7LFL8 322 aaKnown RBP7.72□□□□□ -1.17
HPS4-201ENST00000336873 ADGRF3Q8IZF5 1079 aa7.72□□□□□ -1.17
HPS4-201ENST00000336873 SHISA5Q8N114 240 aa7.72□□□□□ -1.17
HPS4-201ENST00000336873 MINDY2Q8NBR6 621 aa7.72□□□□□ -1.17
HPS4-201ENST00000336873 PHOSPHO1Q8TCT1 267 aa7.72□□□□□ -1.17
HPS4-201ENST00000336873 AP3S1Q92572 193 aa7.72□□□□□ -1.17
HPS4-201ENST00000336873 CNRIP1Q96F85 164 aaPredicted RBP7.72□□□□□ -1.17
HPS4-201ENST00000336873 AMDHD1Q96NU7 426 aa7.72□□□□□ -1.17
HPS4-201ENST00000336873 MYNNQ9NPC7 610 aa7.72□□□□□ -1.17
HPS4-201ENST00000336873 ENAMQ9NRM1 1142 aa7.72□□□□□ -1.17
HPS4-201ENST00000336873 THSD1Q9NS62 852 aa7.72□□□□□ -1.17
HPS4-201ENST00000336873 SEC14L4Q9UDX3 406 aa7.72□□□□□ -1.17
HPS4-201ENST00000336873 EXO1Q9UQ84 846 aaKnown RBP7.72□□□□□ -1.17
HPS4-201ENST00000336873 GPR55Q9Y2T6 319 aaPredicted RBP7.72□□□□□ -1.17
HPS4-201ENST00000336873 TP53BP1Q12888 1972 aaPredicted RBP7.71□□□□□ -1.17
HPS4-201ENST00000336873 TRBV5-3A0A0A0MS03 114 aa7.71□□□□□ -1.17
HPS4-201ENST00000336873 A0A0A6YYC8 382 aaPredicted RBP7.71□□□□□ -1.17
HPS4-201ENST00000336873 GRXCR2A6NFK2 248 aa7.71□□□□□ -1.17
HPS4-201ENST00000336873 H7C1C5 153 aa7.71□□□□□ -1.17
HPS4-201ENST00000336873 I3L1I5 382 aaPredicted RBP7.71□□□□□ -1.17
HPS4-201ENST00000336873 FFAR1O14842 300 aa7.71□□□□□ -1.17
HPS4-201ENST00000336873 DYRK3O43781 588 aa7.71□□□□□ -1.17
HPS4-201ENST00000336873 GREM1O60565 184 aa7.71□□□□□ -1.17
HPS4-201ENST00000336873 UGDHO60701 494 aa7.71□□□□□ -1.17
HPS4-201ENST00000336873 CHRM4P08173 479 aa7.71□□□□□ -1.17
HPS4-201ENST00000336873 ITGB7P26010 798 aa7.71□□□□□ -1.17
HPS4-201ENST00000336873 TRIM23P36406 574 aa7.71□□□□□ -1.17
HPS4-201ENST00000336873 SRP9P49458 86 aaKnown RBP7.71□□□□□ -1.17
HPS4-201ENST00000336873 LCN6P62502 163 aa7.71□□□□□ -1.17
HPS4-201ENST00000336873 SELENBP1Q13228 472 aa7.71□□□□□ -1.17
HPS4-201ENST00000336873 PGBD2Q6P3X8 592 aa7.71□□□□□ -1.17
HPS4-201ENST00000336873 METAP1DQ6UB28 335 aaPredicted RBP7.71□□□□□ -1.17
HPS4-201ENST00000336873 CHMP1BQ7LBR1 199 aa7.71□□□□□ -1.17
HPS4-201ENST00000336873 ZNF367Q7RTV3 350 aa7.71□□□□□ -1.17
HPS4-201ENST00000336873 PRSS41Q7RTY9 318 aa7.71□□□□□ -1.17
HPS4-201ENST00000336873 GPR32P1Q8NGA4 272 aa7.71□□□□□ -1.17
HPS4-201ENST00000336873 OR13C2Q8NGS9 318 aa7.71□□□□□ -1.17
HPS4-201ENST00000336873 C9orf43Q8TAL5 461 aaPredicted RBP7.71□□□□□ -1.17
HPS4-201ENST00000336873 RFKQ969G6 155 aa7.71□□□□□ -1.17
HPS4-201ENST00000336873 LYSMD1Q96S90 227 aa7.71□□□□□ -1.17
HPS4-201ENST00000336873 MS4A8Q9BY19 250 aa7.71□□□□□ -1.17
HPS4-201ENST00000336873 SLC22A4Q9H015 551 aa7.71□□□□□ -1.17
HPS4-201ENST00000336873 KRCC1Q9NPI7 259 aaPredicted RBP7.71□□□□□ -1.17
HPS4-201ENST00000336873 TXNL4BQ9NX01 149 aaKnown RBP7.71□□□□□ -1.17
HPS4-201ENST00000336873 TBC1D29Q9UFV1 150 aa7.71□□□□□ -1.17
HPS4-201ENST00000336873 PADI2Q9Y2J8 665 aa7.71□□□□□ -1.17
HPS4-201ENST00000336873 AKAP8O43823 692 aaKnown RBP7.71□□□□□ -1.18
HPS4-201ENST00000336873 GCM2O75603 506 aaPredicted RBP7.71□□□□□ -1.18
HPS4-201ENST00000336873 SHC1P29353 583 aa7.71□□□□□ -1.18
HPS4-201ENST00000336873 SSTR2P30874 369 aa7.71□□□□□ -1.18
HPS4-201ENST00000336873 BMP8BP34820 402 aa7.71□□□□□ -1.18
HPS4-201ENST00000336873 XCR1P46094 333 aa7.71□□□□□ -1.18
HPS4-201ENST00000336873 DSG2Q14126 1118 aa7.71□□□□□ -1.18
HPS4-201ENST00000336873 P2RY14Q15391 338 aa7.71□□□□□ -1.18
HPS4-201ENST00000336873 CLPPQ16740 277 aaPredicted RBP7.71□□□□□ -1.18
HPS4-201ENST00000336873 SLC36A4Q6YBV0 504 aa7.71□□□□□ -1.18
HPS4-201ENST00000336873 BMP8AQ7Z5Y6 402 aa7.71□□□□□ -1.18
HPS4-201ENST00000336873 RANBP3LQ86VV4 465 aaPredicted RBP7.71□□□□□ -1.18
HPS4-201ENST00000336873 LRRC17Q8N6Y2 441 aa7.71□□□□□ -1.18
HPS4-201ENST00000336873 LINC01555Q8NAE3 123 aa7.71□□□□□ -1.18
HPS4-201ENST00000336873 SRFBP1Q8NEF9 429 aaKnown RBP7.71□□□□□ -1.18
HPS4-201ENST00000336873 OR2T33Q8NG76 320 aa7.71□□□□□ -1.18
HPS4-201ENST00000336873 OR8S1Q8NH09 359 aa7.71□□□□□ -1.18
HPS4-201ENST00000336873 OR5K2Q8NHB8 316 aa7.71□□□□□ -1.18
HPS4-201ENST00000336873 MMABQ96EY8 250 aaPredicted RBP7.71□□□□□ -1.18
HPS4-201ENST00000336873 SLC41A3Q96GZ6 507 aa7.71□□□□□ -1.18
HPS4-201ENST00000336873 MED28Q9H204 178 aa7.71□□□□□ -1.18
HPS4-201ENST00000336873 SEMA4GQ9NTN9 838 aa7.71□□□□□ -1.18
HPS4-201ENST00000336873 FBXO34Q9NWN3 711 aa7.71□□□□□ -1.18
HPS4-201ENST00000336873 ZNF639Q9UID6 485 aa7.71□□□□□ -1.18
HPS4-201ENST00000336873 ATPIF1Q9UII2 106 aa7.71□□□□□ -1.18
HPS4-201ENST00000336873 FBXL4Q9UKA2 621 aa7.71□□□□□ -1.18
HPS4-201ENST00000336873 STUB1Q9UNE7 303 aa7.71□□□□□ -1.18
HPS4-201ENST00000336873 NOX1Q9Y5S8 564 aa7.71□□□□□ -1.18
HPS4-201ENST00000336873 DOCK4Q8N1I0 1966 aa7.71□□□□□ -1.18
HPS4-201ENST00000336873 GBF1Q92538 1859 aa7.71□□□□□ -1.18
HPS4-201ENST00000336873 TRIM64BA6NI03 449 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms