RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 F5P12259 2224 aa15.48■□□□□ 0.07
CDC42EP4-201ENST00000335793 CDH23Q9H251 3354 aa15.48■□□□□ 0.07
CDC42EP4-201ENST00000335793 TRBV23OR9-2A0A075B6M9 112 aa15.48■□□□□ 0.07
CDC42EP4-201ENST00000335793 ISM1B1AKI9 464 aa15.48■□□□□ 0.07
CDC42EP4-201ENST00000335793 ACP2P11117 423 aa15.48■□□□□ 0.07
CDC42EP4-201ENST00000335793 CCL5P13501 91 aa15.48■□□□□ 0.07
CDC42EP4-201ENST00000335793 RPL6Q02878 288 aaKnown RBP15.48■□□□□ 0.07
CDC42EP4-201ENST00000335793 WSCD2Q2TBF2 565 aa15.48■□□□□ 0.07
CDC42EP4-201ENST00000335793 ZBTB37Q5TC79 503 aa15.48■□□□□ 0.07
CDC42EP4-201ENST00000335793 CREB3L2Q70SY1 520 aa15.48■□□□□ 0.07
CDC42EP4-201ENST00000335793 ZNF680Q8NEM1 530 aa15.48■□□□□ 0.07
CDC42EP4-201ENST00000335793 APOBEC4Q8WW27 367 aaKnown RBP15.48■□□□□ 0.07
CDC42EP4-201ENST00000335793 PCBD2Q9H0N5 130 aa15.48■□□□□ 0.07
CDC42EP4-201ENST00000335793 FZD3Q9NPG1 666 aa15.48■□□□□ 0.07
CDC42EP4-201ENST00000335793 KLHL1Q9NR64 748 aa15.48■□□□□ 0.07
CDC42EP4-201ENST00000335793 PLEKHB1Q9UF11 243 aaPredicted RBP15.48■□□□□ 0.07
CDC42EP4-201ENST00000335793 ZNF175Q9Y473 711 aa15.48■□□□□ 0.07
CDC42EP4-201ENST00000335793 ATG4BQ9Y4P1 393 aa15.48■□□□□ 0.07
CDC42EP4-201ENST00000335793 TRPM6Q9BX84 2022 aa15.48■□□□□ 0.07
CDC42EP4-201ENST00000335793 SCN3AQ9NY46 2000 aa15.48■□□□□ 0.07
CDC42EP4-201ENST00000335793 EDDM13A0A1B0GTR0 161 aa15.48■□□□□ 0.07
CDC42EP4-201ENST00000335793 B4DXG7 233 aa15.48■□□□□ 0.07
CDC42EP4-201ENST00000335793 CPEP16870 476 aa15.48■□□□□ 0.07
CDC42EP4-201ENST00000335793 MC3RP41968 323 aa15.48■□□□□ 0.07
CDC42EP4-201ENST00000335793 MAP2K3P46734 347 aa15.48■□□□□ 0.07
CDC42EP4-201ENST00000335793 LIMK1P53667 647 aa15.48■□□□□ 0.07
CDC42EP4-201ENST00000335793 PRR5P85299 388 aa15.48■□□□□ 0.07
CDC42EP4-201ENST00000335793 ZNF234Q14588 700 aa15.48■□□□□ 0.07
CDC42EP4-201ENST00000335793 COL19A1Q14993 1142 aa15.48■□□□□ 0.07
CDC42EP4-201ENST00000335793 P2RY14Q15391 338 aa15.48■□□□□ 0.07
CDC42EP4-201ENST00000335793 TMEM201Q5SNT2 666 aa15.48■□□□□ 0.07
CDC42EP4-201ENST00000335793 ANKRD33Q7Z3H0 272 aa15.48■□□□□ 0.07
CDC42EP4-201ENST00000335793 BBS10Q8TAM1 723 aa15.48■□□□□ 0.07
CDC42EP4-201ENST00000335793 TMEM163Q8TC26 289 aa15.48■□□□□ 0.07
CDC42EP4-201ENST00000335793 GALNT9Q9HCQ5 603 aa15.48■□□□□ 0.07
CDC42EP4-201ENST00000335793 MRPS30Q9NP92 439 aaKnown RBP15.48■□□□□ 0.07
CDC42EP4-201ENST00000335793 ING3Q9NXR8 418 aa15.48■□□□□ 0.07
CDC42EP4-201ENST00000335793 PLXND1Q9Y4D7 1925 aa15.47■□□□□ 0.07
CDC42EP4-201ENST00000335793 CXorf51AA0A1B0GTR3 108 aa15.47■□□□□ 0.07
CDC42EP4-201ENST00000335793 C1QTNF3-AMACRE9PGA6 284 aa15.47■□□□□ 0.07
CDC42EP4-201ENST00000335793 CLTBP09497 229 aa15.47■□□□□ 0.07
CDC42EP4-201ENST00000335793 HOXB3P14651 431 aaPredicted RBP15.47■□□□□ 0.07
CDC42EP4-201ENST00000335793 KIR2DL3P43628 341 aa15.47■□□□□ 0.07
CDC42EP4-201ENST00000335793 GDI2P50395 445 aaKnown RBP15.47■□□□□ 0.07
CDC42EP4-201ENST00000335793 SRP54P61011 504 aaKnown RBP15.47■□□□□ 0.07
CDC42EP4-201ENST00000335793 RGS1Q08116 209 aa15.47■□□□□ 0.07
CDC42EP4-201ENST00000335793 RAB40BQ12829 278 aa15.47■□□□□ 0.07
CDC42EP4-201ENST00000335793 RNASE12Q5GAN4 147 aaKnown RBP15.47■□□□□ 0.07
CDC42EP4-201ENST00000335793 MTSS1LQ765P7 747 aa15.47■□□□□ 0.07
CDC42EP4-201ENST00000335793 NRMQ8IXM6 262 aa15.47■□□□□ 0.07
CDC42EP4-201ENST00000335793 CEP76Q8TAP6 659 aa15.47■□□□□ 0.07
CDC42EP4-201ENST00000335793 SUN3Q8TAQ9 357 aa15.47■□□□□ 0.07
CDC42EP4-201ENST00000335793 SMG7Q92540 1137 aaKnown RBP15.47■□□□□ 0.07
CDC42EP4-201ENST00000335793 ACSS1Q9NUB1 689 aaPredicted RBP15.47■□□□□ 0.07
CDC42EP4-201ENST00000335793 COPS3Q9UNS2 423 aa15.47■□□□□ 0.07
CDC42EP4-201ENST00000335793 LGALS8O00214 317 aa15.47■□□□□ 0.07
CDC42EP4-201ENST00000335793 CSNK2A2P19784 350 aaPredicted RBP15.47■□□□□ 0.07
CDC42EP4-201ENST00000335793 TPMTP51580 245 aa15.47■□□□□ 0.07
CDC42EP4-201ENST00000335793 ARHGDIBP52566 201 aa15.47■□□□□ 0.07
CDC42EP4-201ENST00000335793 CSNK1G2P78368 415 aa15.47■□□□□ 0.07
CDC42EP4-201ENST00000335793 ST3GAL3Q11203 375 aa15.47■□□□□ 0.07
CDC42EP4-201ENST00000335793 HYAL2Q12891 473 aa15.47■□□□□ 0.07
CDC42EP4-201ENST00000335793 TRAM2Q15035 370 aa15.47■□□□□ 0.07
CDC42EP4-201ENST00000335793 RD3Q7Z3Z2 195 aa15.47■□□□□ 0.07
CDC42EP4-201ENST00000335793 CLDN22Q8N7P3 220 aa15.47■□□□□ 0.07
CDC42EP4-201ENST00000335793 NUP43Q8NFH3 380 aa15.47■□□□□ 0.07
CDC42EP4-201ENST00000335793 OR9A2Q8NGT5 310 aa15.47■□□□□ 0.07
CDC42EP4-201ENST00000335793 RFKQ969G6 155 aa15.47■□□□□ 0.07
CDC42EP4-201ENST00000335793 PELI2Q9HAT8 420 aa15.47■□□□□ 0.07
CDC42EP4-201ENST00000335793 ALG5Q9Y673 324 aa15.47■□□□□ 0.07
CDC42EP4-201ENST00000335793 ZNF780BQ9Y6R6 833 aa15.47■□□□□ 0.07
CDC42EP4-201ENST00000335793 SPINT1O43278 529 aa15.46■□□□□ 0.07
CDC42EP4-201ENST00000335793 LGI1O95970 557 aa15.46■□□□□ 0.07
CDC42EP4-201ENST00000335793 HRGP04196 525 aa15.46■□□□□ 0.07
CDC42EP4-201ENST00000335793 ITGB8P26012 769 aa15.46■□□□□ 0.07
CDC42EP4-201ENST00000335793 CERS1P27544 350 aa15.46■□□□□ 0.07
CDC42EP4-201ENST00000335793 BNC1Q01954 994 aa15.46■□□□□ 0.07
CDC42EP4-201ENST00000335793 KRT74Q7RTS7 529 aa15.46■□□□□ 0.07
CDC42EP4-201ENST00000335793 ZNF614Q8N883 585 aa15.46■□□□□ 0.07
CDC42EP4-201ENST00000335793 MRPL43Q8N983 215 aaKnown RBP15.46■□□□□ 0.07
CDC42EP4-201ENST00000335793 ACOT4Q8N9L9 421 aa15.46■□□□□ 0.07
CDC42EP4-201ENST00000335793 GNPDA2Q8TDQ7 276 aa15.46■□□□□ 0.07
CDC42EP4-201ENST00000335793 WFIKKN2Q8TEU8 576 aa15.46■□□□□ 0.07
CDC42EP4-201ENST00000335793 OTUB2Q96DC9 234 aa15.46■□□□□ 0.07
CDC42EP4-201ENST00000335793 LINC00052Q96N35 136 aa15.46■□□□□ 0.07
CDC42EP4-201ENST00000335793 MCHR1Q99705 422 aa15.46■□□□□ 0.07
CDC42EP4-201ENST00000335793 FAM83CQ9BQN1 747 aa15.46■□□□□ 0.07
CDC42EP4-201ENST00000335793 RHBGQ9H310 441 aa15.46■□□□□ 0.07
CDC42EP4-201ENST00000335793 RANBP3Q9H6Z4 567 aaPredicted RBP15.46■□□□□ 0.07
CDC42EP4-201ENST00000335793 LHX9Q9NQ69 397 aa15.46■□□□□ 0.07
CDC42EP4-201ENST00000335793 LOC102723532A0A0G2JNH3 316 aa15.46■□□□□ 0.07
CDC42EP4-201ENST00000335793 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.46■□□□□ 0.07
CDC42EP4-201ENST00000335793 OR5F1O95221 314 aa15.46■□□□□ 0.07
CDC42EP4-201ENST00000335793 HLA-DPB1P04440 258 aa15.46■□□□□ 0.07
CDC42EP4-201ENST00000335793 MPIP34949 423 aa15.46■□□□□ 0.07
CDC42EP4-201ENST00000335793 CDK3Q00526 305 aa15.46■□□□□ 0.07
CDC42EP4-201ENST00000335793 C3orf38Q5JPI3 329 aa15.46■□□□□ 0.07
CDC42EP4-201ENST00000335793 C1orf94Q6P1W5 598 aa15.46■□□□□ 0.07
CDC42EP4-201ENST00000335793 ZNF793Q6ZN11 406 aa15.46■□□□□ 0.07
CDC42EP4-201ENST00000335793 NKAIN4Q8IVV8 208 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms