RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 ACSM3Q53FZ2 586 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 PAGE3Q5JUK9 113 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 NADSYN1Q6IA69 706 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 OR10K2Q6IF99 312 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 SH3RF2Q8TEC5 729 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 SMAP2Q8WU79 429 aaPredicted RBP9.29□□□□□ -0.92
COL4A6-201ENST00000334504 BACE2Q9Y5Z0 518 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 ENPP4Q9Y6X5 453 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 VWDEQ8N2E2 1590 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 DIP2CQ9Y2E4 1556 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 CD300LBA8K4G0 201 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 ITGB2P05107 769 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 SERPINA5P05154 406 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 HLA-DMAP28067 261 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 PSMB10P40306 273 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 BDH1Q02338 343 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 METAP1DQ6UB28 335 aaPredicted RBP9.29□□□□□ -0.92
COL4A6-201ENST00000334504 Q6ZNX1 250 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 ERN2Q76MJ5 926 aaKnown RBP9.29□□□□□ -0.92
COL4A6-201ENST00000334504 SLC9B2Q86UD5 537 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 SFXN5Q8TD22 340 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 TMEM234Q8WY98 164 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 TAAR8Q969N4 342 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 MUL1Q969V5 352 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 ZMYND19Q96E35 227 aaPredicted RBP9.29□□□□□ -0.92
COL4A6-201ENST00000334504 RCE1Q9Y256 329 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 DVL2O14641 736 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 IMPA2O14732 288 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 CDC123O75794 336 aaPredicted RBP9.29□□□□□ -0.92
COL4A6-201ENST00000334504 S1PR4O95977 384 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 HOXB5P09067 269 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 NFYAP23511 347 aaPredicted RBP9.29□□□□□ -0.92
COL4A6-201ENST00000334504 TCTE1Q5JU00 501 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 ZNF461Q8TAF7 563 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 WFIKKN2Q8TEU8 576 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 NPRL2Q8WTW4 380 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 BSCL2Q96G97 398 aaPredicted RBP9.29□□□□□ -0.92
COL4A6-201ENST00000334504 METTL2AQ96IZ6 378 aaKnown RBP9.29□□□□□ -0.92
COL4A6-201ENST00000334504 CENPOQ9BU64 300 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 BCO2Q9BYV7 579 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 DPH1Q9BZG8 443 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 FZD8Q9H461 694 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 HAO2Q9NYQ3 351 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 CNIH4Q9P003 139 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 PRAMEF11O60813 436 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 CRHBPP24387 322 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 NUDT1P36639 197 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 GSTM4Q03013 218 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 SLC14A1Q13336 389 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 FIGNL1Q6PIW4 674 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 TSSK4Q6SA08 328 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 CTU1Q7Z7A3 348 aaKnown RBP9.29□□□□□ -0.92
COL4A6-201ENST00000334504 OR52N2Q8NGI0 321 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 OR2T4Q8NH00 348 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 SLC2A12Q8TD20 617 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 TRIB3Q96RU7 358 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 MRIQ9BWK5 157 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 SLC25A31Q9H0C2 315 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 SMOC2Q9H3U7 446 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 PRTFDC1Q9NRG1 225 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 C2orf42Q9NWW7 574 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 hCG_1807616A0A1W2PRN6 198 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 MMP12P39900 470 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 PRRT3Q5FWE3 981 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 UBE2NLQ5JXB2 153 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 TMEM164Q5U3C3 297 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 STEAP3Q658P3 488 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 PGM2L1Q6PCE3 622 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 LRRC28Q86X40 367 aaPredicted RBP9.28□□□□□ -0.92
COL4A6-201ENST00000334504 CMTM1Q8IZ96 169 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 PRR18Q8N4B5 295 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 SLC30A7Q8NEW0 376 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 OR52B6Q8NGF0 335 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 OR51Q1Q8NH59 317 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 CHTF18Q8WVB6 975 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 PELOQ9BRX2 385 aaKnown RBP9.28□□□□□ -0.92
COL4A6-201ENST00000334504 ZNF230Q9UIE0 474 aaPredicted RBP9.28□□□□□ -0.92
COL4A6-201ENST00000334504 PURGQ9UJV8 347 aaKnown RBP9.28□□□□□ -0.92
COL4A6-201ENST00000334504 CSNK1G3Q9Y6M4 447 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 A0A087WZY1 265 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 PNPP00491 289 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 COL5A2P05997 1499 aaPredicted RBP9.28□□□□□ -0.92
COL4A6-201ENST00000334504 MPC1LP0DKB6 136 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 F3P13726 295 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 GABRB3P28472 473 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 GKP32189 559 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 HOXD13P35453 343 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 RGNQ15493 299 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 TXNDC8Q6A555 127 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 C15orf52Q6ZUT6 534 aaKnown RBP9.28□□□□□ -0.92
COL4A6-201ENST00000334504 CMIPQ8IY22 773 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 SLAIN1Q8ND83 568 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 TSTD1Q8NFU3 115 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 ECHDC3Q96DC8 303 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 SNX18Q96RF0 628 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 PAPOLGQ9BWT3 736 aaKnown RBP9.28□□□□□ -0.92
COL4A6-201ENST00000334504 FEZF1A0PJY2 475 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 H0Y8G0 127 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 GAPDHSO14556 408 aaPredicted RBP9.28□□□□□ -0.92
COL4A6-201ENST00000334504 SELPLGQ14242 412 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms