RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 SF3A2Q15428 464 aaKnown RBP11.08□□□□□ -0.64
HDAC6-201ENST00000334136 ZNF630Q2M218 657 aaPredicted RBP11.08□□□□□ -0.64
HDAC6-201ENST00000334136 CPZQ66K79 652 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 TCEAL6Q6IPX3 200 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 ADNP2Q6IQ32 1131 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 REEP3Q6NUK4 255 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 COMMD6Q7Z4G1 85 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 COMMD2Q86X83 199 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 B3GNT7Q8NFL0 401 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 OR4K14Q8NGD5 310 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 TCEAL3Q969E4 200 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 AMBRA1Q9C0C7 1298 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 DMRT3Q9NQL9 472 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 A0A0A6YYC8 382 aaPredicted RBP11.08□□□□□ -0.64
HDAC6-201ENST00000334136 EFCAB7A8K855 629 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 I3L1I5 382 aaPredicted RBP11.08□□□□□ -0.64
HDAC6-201ENST00000334136 SMAD9O15198 467 aaKnown RBP11.08□□□□□ -0.64
HDAC6-201ENST00000334136 IL3P08700 152 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 AHRP35869 848 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 CASP3P42574 277 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 RGS6P49758 472 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 RPS15P62841 145 aaKnown RBP11.08□□□□□ -0.64
HDAC6-201ENST00000334136 VLDLRP98155 873 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 KCNC4Q03721 635 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 LASP1Q14847 261 aaKnown RBP11.08□□□□□ -0.64
HDAC6-201ENST00000334136 OXA1LQ15070 435 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 NRROSQ86YC3 692 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 OR51G2Q8NGK0 314 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 UBTD2Q8WUN7 234 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 PEX11GQ96HA9 241 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 FUZQ9BT04 418 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 NANSQ9NR45 359 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 C19orf25Q9UFG5 118 aaPredicted RBP11.08□□□□□ -0.64
HDAC6-201ENST00000334136 GPR52Q9Y2T5 361 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 A0A075B6Q4 140 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 A0A1B0GTQ1 180 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 CENPBD1B2RD01 187 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 FXYD1O00168 92 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 S100A9P06702 114 aaKnown RBP11.07□□□□□ -0.64
HDAC6-201ENST00000334136 OLFML2AQ68BL7 652 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 PGBD2Q6P3X8 592 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 FAM220AQ7Z4H9 259 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 SLC35F3Q8IY50 421 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 KCT2Q8NC54 265 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 OR2L5Q8NG80 312 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 C1orf216Q8TAB5 229 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 DNASE2BQ8WZ79 361 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 AKAP1Q92667 903 aaKnown RBP eCLIP11.07□□□□□ -0.64
HDAC6-201ENST00000334136 PIP5K1AQ99755 562 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 NEURL2Q9BR09 285 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 CENPOQ9BU64 300 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 DPCDQ9BVM2 203 aaPredicted RBP11.07□□□□□ -0.64
HDAC6-201ENST00000334136 REEP4Q9H6H4 257 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 BRD7Q9NPI1 651 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 ABCD2Q9UBJ2 740 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 MBD1Q9UIS9 605 aaPredicted RBP11.07□□□□□ -0.64
HDAC6-201ENST00000334136 MRTO4Q9UKD2 239 aaKnown RBP11.07□□□□□ -0.64
HDAC6-201ENST00000334136 TBC1D24Q9ULP9 559 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 A0A1B0GVC2 190 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 A6NIN4 97 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 RIIAD1A6NNX1 92 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 EEF1E1O43324 174 aaKnown RBP11.07□□□□□ -0.64
HDAC6-201ENST00000334136 SDC1P18827 310 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 ERP29P30040 261 aaKnown RBP11.07□□□□□ -0.64
HDAC6-201ENST00000334136 MNDAP41218 407 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 GTF2IRD2BQ6EKJ0 949 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 GTF2IRD2Q86UP8 949 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 NOXA1Q86UR1 476 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 VMP1Q96GC9 406 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 LOXL4Q96JB6 756 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 LRRN3Q9H3W5 708 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 GPN1Q9HCN4 374 aaPredicted RBP11.07□□□□□ -0.64
HDAC6-201ENST00000334136 RANGRFQ9HD47 186 aaPredicted RBP11.07□□□□□ -0.64
HDAC6-201ENST00000334136 IL20RAQ9UHF4 553 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 HYKKA2RU49 373 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 CD8B2A6NJW9 211 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 J3QLW9 94 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 GALR2O43603 387 aaPredicted RBP11.07□□□□□ -0.64
HDAC6-201ENST00000334136 NUDT7P0C024 238 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 ZNF888P0CJ79 500 aaPredicted RBP11.07□□□□□ -0.64
HDAC6-201ENST00000334136 CD8BP10966 210 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 ZNF19P17023 458 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 ZMYND11Q15326 602 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 NLGN4XQ8N0W4 816 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 OR6K6Q8NGW6 343 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 GAL3ST3Q96A11 431 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 DPAGT1Q9H3H5 408 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 BRF2Q9HAW0 419 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 CENPFP49454 3210 aa11.07□□□□□ -0.64
HDAC6-201ENST00000334136 DLL1O00548 723 aa11.06□□□□□ -0.64
HDAC6-201ENST00000334136 SOD1P00441 154 aa11.06□□□□□ -0.64
HDAC6-201ENST00000334136 ACADLP28330 430 aa11.06□□□□□ -0.64
HDAC6-201ENST00000334136 NOVA1P51513 510 aaKnown RBP11.06□□□□□ -0.64
HDAC6-201ENST00000334136 EMP3P54852 163 aa11.06□□□□□ -0.64
HDAC6-201ENST00000334136 CSNK1G2P78368 415 aa11.06□□□□□ -0.64
HDAC6-201ENST00000334136 SHC2P98077 582 aa11.06□□□□□ -0.64
HDAC6-201ENST00000334136 KEAP1Q14145 624 aa11.06□□□□□ -0.64
HDAC6-201ENST00000334136 CTU2Q2VPK5 515 aaKnown RBP11.06□□□□□ -0.64
HDAC6-201ENST00000334136 LSM14AQ8ND56 463 aaKnown RBP11.06□□□□□ -0.64
HDAC6-201ENST00000334136 OR8J1Q8NGP2 316 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms