RNA–Protein interactions for RNA: ENST00000331493.6

EFCAB13-201, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EFCAB13, Length 3,931 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-201ENST00000331493 COX18Q8N8Q8 333 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 OR2T33Q8NG76 320 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 OR4M2Q8NGB6 313 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 ABCG5Q9H222 651 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 SRMSQ9H3Y6 488 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 HINT3Q9NQE9 182 aaKnown RBP11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 ENAMQ9NRM1 1142 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 MAN2C1Q9NTJ4 1040 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 NLGN3Q9NZ94 848 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 LSM2Q9Y333 95 aaKnown RBP11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 GRIP1Q9Y3R0 1128 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 LOC105369274A0A096LPK9 316 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 H0Y8X5 98 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 MAN2B1O00754 1011 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 CMPK1P30085 196 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 SRP9P49458 86 aaKnown RBP11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 REEP5Q00765 189 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 E2F2Q14209 437 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 CST6Q15828 149 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 NDUFA9Q16795 377 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 GXYLT1Q4G148 440 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 PRPF38BQ5VTL8 546 aaKnown RBP11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 GDPGP1Q6ZNW5 385 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 ESPNLQ6ZVH7 1005 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 OR4N4Q8N0Y3 316 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 UXS1Q8NBZ7 420 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 OR4Q3Q8NH05 313 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 CCL4L1Q8NHW4 92 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 SPPL3Q8TCT6 385 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 CHAC2Q8WUX2 184 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 OTUB2Q96DC9 234 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 PELI2Q9HAT8 420 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 ING3Q9NXR8 418 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 ICKQ9UPZ9 632 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 FAM171A2A8MVW0 826 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 RPL4P36578 427 aaKnown RBP11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 OR10A3P58181 314 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 RAB40BQ12829 278 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 FLYWCH1Q4VC44 716 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 CEACAM19Q7Z692 300 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 SIX5Q8N196 739 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 TP53I13Q8NBR0 393 aaPredicted RBP11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 FAM98AQ8NCA5 519 aaKnown RBP11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 OR6C4Q8NGE1 309 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 OR56A1Q8NGH5 318 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 OR13C5Q8NGS8 318 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 PFN4Q8NHR9 129 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 ORAI1Q96D31 301 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 MS4A6EQ96DS6 147 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 EPHX3Q9H6B9 360 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 COQ3Q9NZJ6 369 aa11.04□□□□□ -0.64
EFCAB13-201ENST00000331493 CENPVL1A0A0U1RR11 272 aa11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 FAM172BPA6NC97 362 aa11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 HMX3A6NHT5 357 aa11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 PIPP12273 146 aaPredicted RBP11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 DRD2P14416 443 aa11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 NDUFV2P19404 249 aa11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 OCLNQ16625 522 aa11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 ODF4Q2M2E3 257 aa11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 TRMT12Q53H54 448 aaKnown RBP11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 TANGO2Q6ICL3 276 aa11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 RNF44Q7L0R7 432 aa11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 ACSS1Q9NUB1 689 aaPredicted RBP11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 EXOSC1Q9Y3B2 195 aaKnown RBP11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 A0A0G2JPF8 293 aa11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 HNRNPCL2B2RXH8 293 aa11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 HNRNPCL3B7ZW38 293 aa11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 MEN1O00255 615 aa11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 DNAJB6O75190 326 aa11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 SOX30O94993 753 aa11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 CD3GP09693 182 aa11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 HNRNPCL4P0DMR1 293 aa11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 DRD5P21918 477 aa11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 GDI1P31150 447 aa11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 ETV6P41212 452 aa11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 ABHD17CQ6PCB6 329 aa11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 POMZP3Q6PJE2 187 aa11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 KIAA1324Q6UXG2 1013 aaKnown RBP11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 FBXO15Q8NCQ5 510 aaPredicted RBP11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 FANK1Q8TC84 345 aa11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 OSTF1Q92882 214 aa11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 SNAPC3Q92966 411 aa11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 ELP4Q96EB1 424 aa11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 WDR34Q96EX3 536 aa11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 SLC35A4Q96G79 324 aa11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 ALG8Q9BVK2 526 aa11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 BTBD1Q9H0C5 482 aa11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 SLC38A1Q9H2H9 487 aa11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 FBXO34Q9NWN3 711 aa11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 APOBEC3BQ9UH17 382 aaKnown RBP11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 FBXL4Q9UKA2 621 aa11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 STON1Q9Y6Q2 735 aa11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 AP1M2Q9Y6Q5 423 aa11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 IGKV1-8A0A0C4DH67 115 aa11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 CACNB4O00305 520 aaPredicted RBP11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 PEX12O00623 359 aa11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 CDC42EP2O14613 210 aa11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 PLA2G10O15496 165 aa11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 SLC35G6P0C7Q6 338 aa11.03□□□□□ -0.64
EFCAB13-201ENST00000331493 CPEP16870 476 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms