RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 BRF2Q9HAW0 419 aa13.24□□□□□ -0.29
EPHB3-201ENST00000330394 ASF1BQ9NVP2 202 aa13.24□□□□□ -0.29
EPHB3-201ENST00000330394 USP54Q70EL1 1684 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 CLDN4O14493 209 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 KHNYNO15037 678 aaKnown RBP13.23□□□□□ -0.29
EPHB3-201ENST00000330394 LRRTM2O43300 516 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 SLC43A1O75387 559 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 C1QBP02746 253 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 UCHL1P09936 223 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 LAG3P18627 525 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 GABRA5P31644 462 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 GJA5P36382 358 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 CLLU1OSQ5K130 101 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 SSX6Q7RTT6 188 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 VRK2Q86Y07 508 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 OR2L2Q8NH16 312 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 ZFAND1Q8TCF1 268 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 SLC7A13Q8TCU3 470 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 ZNF582Q96NG8 517 aaPredicted RBP13.23□□□□□ -0.29
EPHB3-201ENST00000330394 FKBP14Q9NWM8 211 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 QPCTLQ9NXS2 382 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 PRICKLE3O43900 615 aaPredicted RBP13.23□□□□□ -0.29
EPHB3-201ENST00000330394 AGR2O95994 175 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 ZNF865P0CJ78 1059 aaPredicted RBP13.23□□□□□ -0.29
EPHB3-201ENST00000330394 KCNJ10P78508 379 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 ILKQ13418 452 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 APOOLQ6UXV4 268 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 ZNF783Q6ZMS7 281 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 OR4K14Q8NGD5 310 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 CD300LFQ8TDQ1 290 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 ZNF566Q969W8 418 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 MTIF3Q9H2K0 278 aaKnown RBP13.23□□□□□ -0.29
EPHB3-201ENST00000330394 CHMP1AQ9HD42 196 aaPredicted RBP13.23□□□□□ -0.29
EPHB3-201ENST00000330394 ACER3Q9NUN7 267 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 ZNF226Q9NYT6 803 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 LIPT1Q9Y234 373 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 ASB4Q9Y574 426 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 VNN2O95498 520 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 ITGBL1O95965 494 aaPredicted RBP13.23□□□□□ -0.29
EPHB3-201ENST00000330394 ZNF14P17017 642 aaPredicted RBP13.23□□□□□ -0.29
EPHB3-201ENST00000330394 HTR2AP28223 471 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 HSD17B2P37059 387 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 ETV5P41161 510 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 ETV1P50549 477 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 SEC13P55735 322 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 USF2Q15853 346 aaPredicted RBP13.23□□□□□ -0.29
EPHB3-201ENST00000330394 ZNF805Q5CZA5 627 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 CCNJQ5T5M9 372 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 PRSS45Q7RTY3 260 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 KLHDC8AQ8IYD2 350 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 OR4M1Q8NGD0 313 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 PHOSPHO1Q8TCT1 267 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 OR2M2Q96R28 347 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 CMKLR1Q99788 373 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 SYT4Q9H2B2 425 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 CXorf36Q9H7Y0 433 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 NOX3Q9HBY0 568 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.23□□□□□ -0.29
EPHB3-201ENST00000330394 LHX3Q9UBR4 397 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 FBXL2Q9UKC9 423 aa13.23□□□□□ -0.29
EPHB3-201ENST00000330394 UGDHO60701 494 aa13.22□□□□□ -0.29
EPHB3-201ENST00000330394 AMY2AP04746 511 aa13.22□□□□□ -0.29
EPHB3-201ENST00000330394 KIR2DL3P43628 341 aa13.22□□□□□ -0.29
EPHB3-201ENST00000330394 C2orf27AQ580R0 203 aa13.22□□□□□ -0.29
EPHB3-201ENST00000330394 MANEALQ5VSG8 457 aa13.22□□□□□ -0.29
EPHB3-201ENST00000330394 FAM122CQ6P4D5 195 aa13.22□□□□□ -0.29
EPHB3-201ENST00000330394 ZNF527Q8NB42 609 aa13.22□□□□□ -0.29
EPHB3-201ENST00000330394 NEK7Q8TDX7 302 aa13.22□□□□□ -0.29
EPHB3-201ENST00000330394 MYEOVQ96EZ4 313 aa13.22□□□□□ -0.29
EPHB3-201ENST00000330394 AHCYL2Q96HN2 611 aaKnown RBP13.22□□□□□ -0.29
EPHB3-201ENST00000330394 POTEKPQ9BYX7 375 aa13.22□□□□□ -0.29
EPHB3-201ENST00000330394 KCNN3Q9UGI6 736 aa13.22□□□□□ -0.29
EPHB3-201ENST00000330394 GLI3P10071 1580 aa13.22□□□□□ -0.29
EPHB3-201ENST00000330394 UBXN7O94888 489 aa13.22□□□□□ -0.29
EPHB3-201ENST00000330394 AKT2P31751 481 aa13.22□□□□□ -0.29
EPHB3-201ENST00000330394 PDGFRLQ15198 375 aa13.22□□□□□ -0.29
EPHB3-201ENST00000330394 P2RY14Q15391 338 aa13.22□□□□□ -0.29
EPHB3-201ENST00000330394 TCTE1Q5JU00 501 aa13.22□□□□□ -0.29
EPHB3-201ENST00000330394 ZC3H14Q6PJT7 736 aaKnown RBP13.22□□□□□ -0.29
EPHB3-201ENST00000330394 SIAH3Q8IW03 269 aa13.22□□□□□ -0.29
EPHB3-201ENST00000330394 SDR9C7Q8NEX9 313 aa13.22□□□□□ -0.29
EPHB3-201ENST00000330394 SLC25A46Q96AG3 418 aa13.22□□□□□ -0.29
EPHB3-201ENST00000330394 DDOQ99489 341 aa13.22□□□□□ -0.29
EPHB3-201ENST00000330394 SGIP1Q9BQI5 828 aa13.22□□□□□ -0.29
EPHB3-201ENST00000330394 ABCG4Q9H172 646 aa13.22□□□□□ -0.29
EPHB3-201ENST00000330394 COL22A1Q8NFW1 1626 aaPredicted RBP13.22□□□□□ -0.29
EPHB3-201ENST00000330394 SOCS6O14544 535 aa13.22□□□□□ -0.29
EPHB3-201ENST00000330394 SIX6O95475 246 aa13.22□□□□□ -0.29
EPHB3-201ENST00000330394 PTPN2P17706 415 aa13.22□□□□□ -0.29
EPHB3-201ENST00000330394 ELAVL4P26378 380 aaKnown RBP13.22□□□□□ -0.29
EPHB3-201ENST00000330394 PSMB5P28074 263 aa13.22□□□□□ -0.29
EPHB3-201ENST00000330394 PKLRP30613 574 aa13.22□□□□□ -0.29
EPHB3-201ENST00000330394 VEGFCP49767 419 aa13.22□□□□□ -0.29
EPHB3-201ENST00000330394 ACTC1P68032 377 aa13.22□□□□□ -0.29
EPHB3-201ENST00000330394 ACTA1P68133 377 aa13.22□□□□□ -0.29
EPHB3-201ENST00000330394 ASAH1Q13510 395 aa13.22□□□□□ -0.29
EPHB3-201ENST00000330394 TEAD2Q15562 447 aa13.22□□□□□ -0.29
EPHB3-201ENST00000330394 TMPRSS9Q7Z410 1059 aa13.22□□□□□ -0.29
EPHB3-201ENST00000330394 TMEM41AQ96HV5 264 aa13.22□□□□□ -0.29
EPHB3-201ENST00000330394 OPALINQ96PE5 141 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms