RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 ALDH3A1P30838 453 aa12.25□□□□□ -0.45
GTF3C6-201ENST00000329970 GPC1P35052 558 aa12.25□□□□□ -0.45
GTF3C6-201ENST00000329970 MANFP55145 182 aaKnown RBP12.25□□□□□ -0.45
GTF3C6-201ENST00000329970 CLDN15P56746 228 aa12.25□□□□□ -0.45
GTF3C6-201ENST00000329970 FGFBP1Q14512 234 aa12.25□□□□□ -0.45
GTF3C6-201ENST00000329970 XKR7Q5GH72 579 aa12.25□□□□□ -0.45
GTF3C6-201ENST00000329970 RAET1LQ5VY80 246 aa12.25□□□□□ -0.45
GTF3C6-201ENST00000329970 MISPQ8IVT2 679 aa12.25□□□□□ -0.45
GTF3C6-201ENST00000329970 GCNT2Q8N0V5 402 aa12.25□□□□□ -0.45
GTF3C6-201ENST00000329970 NATD1Q8N6N6 113 aa12.25□□□□□ -0.45
GTF3C6-201ENST00000329970 CHDHQ8NE62 594 aaPredicted RBP12.25□□□□□ -0.45
GTF3C6-201ENST00000329970 NUP43Q8NFH3 380 aa12.25□□□□□ -0.45
GTF3C6-201ENST00000329970 OR6Y1Q8NGX8 325 aa12.25□□□□□ -0.45
GTF3C6-201ENST00000329970 DUSP19Q8WTR2 217 aa12.25□□□□□ -0.45
GTF3C6-201ENST00000329970 TWIST2Q8WVJ9 160 aa12.25□□□□□ -0.45
GTF3C6-201ENST00000329970 SMPDL3BQ92485 455 aa12.25□□□□□ -0.45
GTF3C6-201ENST00000329970 GFM2Q969S9 779 aaKnown RBP12.25□□□□□ -0.45
GTF3C6-201ENST00000329970 CIDECQ96AQ7 238 aaPredicted RBP12.25□□□□□ -0.45
GTF3C6-201ENST00000329970 PPP3R2Q96LZ3 170 aa12.25□□□□□ -0.45
GTF3C6-201ENST00000329970 TSSK3Q96PN8 268 aa12.25□□□□□ -0.45
GTF3C6-201ENST00000329970 TMUB1Q9BVT8 246 aa12.25□□□□□ -0.45
GTF3C6-201ENST00000329970 TBL1XR1Q9BZK7 514 aa12.25□□□□□ -0.45
GTF3C6-201ENST00000329970 RNF122Q9H9V4 155 aa12.25□□□□□ -0.45
GTF3C6-201ENST00000329970 CCM2LQ9NUG4 571 aaPredicted RBP12.25□□□□□ -0.45
GTF3C6-201ENST00000329970 ZNF337Q9Y3M9 751 aa12.25□□□□□ -0.45
GTF3C6-201ENST00000329970 TRAF6Q9Y4K3 522 aa12.25□□□□□ -0.45
GTF3C6-201ENST00000329970 AP4B1Q9Y6B7 739 aa12.25□□□□□ -0.45
GTF3C6-201ENST00000329970 MAP1AP78559 2803 aaPredicted RBP12.25□□□□□ -0.45
GTF3C6-201ENST00000329970 ACANP16112 2415 aa12.25□□□□□ -0.45
GTF3C6-201ENST00000329970 A0A087WZY1 265 aa12.24□□□□□ -0.45
GTF3C6-201ENST00000329970 A0A1W2PQD3 144 aa12.24□□□□□ -0.45
GTF3C6-201ENST00000329970 GXYLT2A0PJZ3 443 aa12.24□□□□□ -0.45
GTF3C6-201ENST00000329970 C7orf72A4D263 438 aa12.24□□□□□ -0.45
GTF3C6-201ENST00000329970 SH3D21A4FU49 640 aa12.24□□□□□ -0.45
GTF3C6-201ENST00000329970 TMEM114B3SHH9 223 aa12.24□□□□□ -0.45
GTF3C6-201ENST00000329970 EMC8O43402 210 aa12.24□□□□□ -0.45
GTF3C6-201ENST00000329970 SOX30O94993 753 aa12.24□□□□□ -0.45
GTF3C6-201ENST00000329970 IGKV1D-16P01601 117 aa12.24□□□□□ -0.45
GTF3C6-201ENST00000329970 CHRNGP07510 517 aa12.24□□□□□ -0.45
GTF3C6-201ENST00000329970 LINC00032P0C843 101 aa12.24□□□□□ -0.45
GTF3C6-201ENST00000329970 ACP2P11117 423 aa12.24□□□□□ -0.45
GTF3C6-201ENST00000329970 BCKDHAP12694 445 aa12.24□□□□□ -0.45
GTF3C6-201ENST00000329970 TBXA2RP21731 343 aa12.24□□□□□ -0.45
GTF3C6-201ENST00000329970 CPA2P48052 419 aa12.24□□□□□ -0.45
GTF3C6-201ENST00000329970 RPS3AP61247 264 aaKnown RBP12.24□□□□□ -0.45
GTF3C6-201ENST00000329970 GUSBP1Q15486 140 aa12.24□□□□□ -0.45
GTF3C6-201ENST00000329970 GRAMD1BQ3KR37 738 aa12.24□□□□□ -0.45
GTF3C6-201ENST00000329970 ARL13AQ5H913 290 aaPredicted RBP12.24□□□□□ -0.45
GTF3C6-201ENST00000329970 MFSD12Q6NUT3 480 aa12.24□□□□□ -0.45
GTF3C6-201ENST00000329970 APOOLQ6UXV4 268 aa12.24□□□□□ -0.45
GTF3C6-201ENST00000329970 P4HA3Q7Z4N8 544 aa12.24□□□□□ -0.45
GTF3C6-201ENST00000329970 LUZP2Q86TE4 346 aa12.24□□□□□ -0.45
GTF3C6-201ENST00000329970 MARCH3Q86UD3 253 aa12.24□□□□□ -0.45
GTF3C6-201ENST00000329970 PSMA8Q8TAA3 256 aa12.24□□□□□ -0.45
GTF3C6-201ENST00000329970 LINC01560Q8TB33 94 aa12.24□□□□□ -0.45
GTF3C6-201ENST00000329970 GPR151Q8TDV0 419 aa12.24□□□□□ -0.45
GTF3C6-201ENST00000329970 ACTRT2Q8TDY3 377 aa12.24□□□□□ -0.45
GTF3C6-201ENST00000329970 PIK3R3Q92569 461 aa12.24□□□□□ -0.45
GTF3C6-201ENST00000329970 STARD4Q96DR4 205 aa12.24□□□□□ -0.45
GTF3C6-201ENST00000329970 FAM111AQ96PZ2 611 aa12.24□□□□□ -0.45
GTF3C6-201ENST00000329970 LIME1Q9H400 295 aa12.24□□□□□ -0.45
GTF3C6-201ENST00000329970 PLEKHF2Q9H8W4 249 aa12.24□□□□□ -0.45
GTF3C6-201ENST00000329970 DUSP22Q9NRW4 184 aa12.24□□□□□ -0.45
GTF3C6-201ENST00000329970 PAQR5Q9NXK6 330 aaPredicted RBP12.24□□□□□ -0.45
GTF3C6-201ENST00000329970 SH3BP4Q9P0V3 963 aa12.24□□□□□ -0.45
GTF3C6-201ENST00000329970 STOML1Q9UBI4 398 aa12.24□□□□□ -0.45
GTF3C6-201ENST00000329970 FIS1Q9Y3D6 152 aa12.24□□□□□ -0.45
GTF3C6-201ENST00000329970 HEATR5AQ86XA9 2040 aa12.23□□□□□ -0.45
GTF3C6-201ENST00000329970 RAI1Q7Z5J4 1906 aaPredicted RBP12.23□□□□□ -0.45
GTF3C6-201ENST00000329970 VPS13CQ709C8 3753 aa12.23□□□□□ -0.45
GTF3C6-201ENST00000329970 FLNAP21333 2647 aaKnown RBP12.23□□□□□ -0.45
GTF3C6-201ENST00000329970 TLDC2A0PJX2 215 aa12.23□□□□□ -0.45
GTF3C6-201ENST00000329970 PIP5K1BO14986 540 aa12.23□□□□□ -0.45
GTF3C6-201ENST00000329970 SCAMP2O15127 329 aaKnown RBP12.23□□□□□ -0.45
GTF3C6-201ENST00000329970 AKAP10O43572 662 aa12.23□□□□□ -0.45
GTF3C6-201ENST00000329970 LYPLA1O75608 230 aaPredicted RBP12.23□□□□□ -0.45
GTF3C6-201ENST00000329970 KCNK2O95069 426 aa12.23□□□□□ -0.45
GTF3C6-201ENST00000329970 OXSR1O95747 527 aaPredicted RBP12.23□□□□□ -0.45
GTF3C6-201ENST00000329970 RAF1P04049 648 aa12.23□□□□□ -0.45
GTF3C6-201ENST00000329970 HRGP04196 525 aa12.23□□□□□ -0.45
GTF3C6-201ENST00000329970 CD8BP10966 210 aa12.23□□□□□ -0.45
GTF3C6-201ENST00000329970 FCGR2AP12318 317 aa12.23□□□□□ -0.45
GTF3C6-201ENST00000329970 HPCAL1P37235 193 aa12.23□□□□□ -0.45
GTF3C6-201ENST00000329970 PRIM2P49643 509 aa12.23□□□□□ -0.45
GTF3C6-201ENST00000329970 SUCLG1P53597 346 aaKnown RBP12.23□□□□□ -0.45
GTF3C6-201ENST00000329970 VSNL1P62760 191 aa12.23□□□□□ -0.45
GTF3C6-201ENST00000329970 STX5Q13190 355 aa12.23□□□□□ -0.45
GTF3C6-201ENST00000329970 ANKRD26P1Q6NSI1 321 aa12.23□□□□□ -0.45
GTF3C6-201ENST00000329970 EMBQ6PCB8 327 aa12.23□□□□□ -0.45
GTF3C6-201ENST00000329970 PLXDC2Q6UX71 529 aa12.23□□□□□ -0.45
GTF3C6-201ENST00000329970 TGIF2LYQ8IUE0 185 aa12.23□□□□□ -0.45
GTF3C6-201ENST00000329970 DDIASQ8IXT1 998 aa12.23□□□□□ -0.45
GTF3C6-201ENST00000329970 OR2W6PQ8NHA6 318 aa12.23□□□□□ -0.45
GTF3C6-201ENST00000329970 TCP10LQ8TDR4 215 aa12.23□□□□□ -0.45
GTF3C6-201ENST00000329970 AENQ8WTP8 325 aaKnown RBP12.23□□□□□ -0.45
GTF3C6-201ENST00000329970 ZIM3Q96PE6 472 aa12.23□□□□□ -0.45
GTF3C6-201ENST00000329970 STACQ99469 402 aa12.23□□□□□ -0.45
GTF3C6-201ENST00000329970 YIPF4Q9BSR8 244 aa12.23□□□□□ -0.45
GTF3C6-201ENST00000329970 TMEM109Q9BVC6 243 aa12.23□□□□□ -0.45
GTF3C6-201ENST00000329970 EQTNQ9NQ60 294 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms