RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 PTCHD1Q96NR3 888 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 SIGLEC11Q96RL6 698 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 PSORS1C1Q9UIG5 152 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 DTX4Q9Y2E6 619 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 U3KQA8 63 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 CDHR4A6H8M9 788 aa13.85□□□□□ -0.19
TPM3-205ENST00000328159 ZNF99A8MXY4 864 aaPredicted RBP13.85□□□□□ -0.19
TPM3-205ENST00000328159 DSCR3O14972 297 aa13.85□□□□□ -0.19
TPM3-205ENST00000328159 TOX3O15405 576 aaPredicted RBP13.85□□□□□ -0.19
TPM3-205ENST00000328159 THY1P04216 161 aa13.85□□□□□ -0.19
TPM3-205ENST00000328159 CFIP05156 583 aa13.85□□□□□ -0.19
TPM3-205ENST00000328159 GSTM3P21266 225 aa13.85□□□□□ -0.19
TPM3-205ENST00000328159 FBLP22087 321 aaKnown RBP13.85□□□□□ -0.19
TPM3-205ENST00000328159 PCSK6P29122 969 aa13.85□□□□□ -0.19
TPM3-205ENST00000328159 MAP2K4P45985 399 aa13.85□□□□□ -0.19
TPM3-205ENST00000328159 RFX3P48380 749 aa13.85□□□□□ -0.19
TPM3-205ENST00000328159 RNF144AP50876 292 aaPredicted RBP13.85□□□□□ -0.19
TPM3-205ENST00000328159 SH3BGRP55822 239 aaPredicted RBP13.85□□□□□ -0.19
TPM3-205ENST00000328159 LSAMPQ13449 338 aa13.85□□□□□ -0.19
TPM3-205ENST00000328159 SQSTM1Q13501 440 aa13.85□□□□□ -0.19
TPM3-205ENST00000328159 DSG2Q14126 1118 aa13.85□□□□□ -0.19
TPM3-205ENST00000328159 FLYWCH1Q4VC44 716 aa13.85□□□□□ -0.19
TPM3-205ENST00000328159 YOD1Q5VVQ6 348 aaPredicted RBP13.85□□□□□ -0.19
TPM3-205ENST00000328159 PEAR1Q5VY43 1037 aaPredicted RBP13.85□□□□□ -0.19
TPM3-205ENST00000328159 C12orf73Q69YU5 71 aa13.85□□□□□ -0.19
TPM3-205ENST00000328159 NPSR1Q6W5P4 371 aa13.85□□□□□ -0.19
TPM3-205ENST00000328159 ZNF730Q6ZMV8 503 aa13.85□□□□□ -0.19
TPM3-205ENST00000328159 NKAIN4Q8IVV8 208 aa13.85□□□□□ -0.19
TPM3-205ENST00000328159 ZNF615Q8N8J6 731 aa13.85□□□□□ -0.19
TPM3-205ENST00000328159 OR4N2Q8NGD1 307 aa13.85□□□□□ -0.19
TPM3-205ENST00000328159 FAR1Q8WVX9 515 aa13.85□□□□□ -0.19
TPM3-205ENST00000328159 ACOT11Q8WXI4 607 aaPredicted RBP13.85□□□□□ -0.19
TPM3-205ENST00000328159 MPP4Q96JB8 637 aa13.85□□□□□ -0.19
TPM3-205ENST00000328159 GPA33Q99795 319 aa13.85□□□□□ -0.19
TPM3-205ENST00000328159 POLR2J2Q9GZM3 115 aaKnown RBP13.85□□□□□ -0.19
TPM3-205ENST00000328159 OR10A5Q9H207 317 aa13.85□□□□□ -0.19
TPM3-205ENST00000328159 ARMC7Q9H6L4 198 aa13.85□□□□□ -0.19
TPM3-205ENST00000328159 FGF21Q9NSA1 209 aa13.85□□□□□ -0.19
TPM3-205ENST00000328159 FKBP14Q9NWM8 211 aa13.85□□□□□ -0.19
TPM3-205ENST00000328159 ATXN7L1Q9ULK2 861 aaPredicted RBP13.85□□□□□ -0.19
TPM3-205ENST00000328159 C17orf105B2RV13 164 aa13.84□□□□□ -0.19
TPM3-205ENST00000328159 YKT6O15498 198 aa13.84□□□□□ -0.19
TPM3-205ENST00000328159 INMTO95050 263 aa13.84□□□□□ -0.19
TPM3-205ENST00000328159 NTN1O95631 604 aa13.84□□□□□ -0.19
TPM3-205ENST00000328159 IGKV1D-16P01601 117 aa13.84□□□□□ -0.19
TPM3-205ENST00000328159 PRG2P13727 222 aa13.84□□□□□ -0.19
TPM3-205ENST00000328159 MASP1P48740 699 aa13.84□□□□□ -0.19
TPM3-205ENST00000328159 ZNF574Q6ZN55 896 aaPredicted RBP13.84□□□□□ -0.19
TPM3-205ENST00000328159 RRM2BQ7LG56 351 aa13.84□□□□□ -0.19
TPM3-205ENST00000328159 PRICKLE2Q7Z3G6 844 aa13.84□□□□□ -0.19
TPM3-205ENST00000328159 TMPRSS9Q7Z410 1059 aa13.84□□□□□ -0.19
TPM3-205ENST00000328159 GALNT15Q8N3T1 639 aa13.84□□□□□ -0.19
TPM3-205ENST00000328159 TOR1AIP2Q8NFQ8 470 aa13.84□□□□□ -0.19
TPM3-205ENST00000328159 C16orf52Q8NHV5 167 aa13.84□□□□□ -0.19
TPM3-205ENST00000328159 PIGXQ8TBF5 258 aa13.84□□□□□ -0.19
TPM3-205ENST00000328159 RORBQ92753 470 aa13.84□□□□□ -0.19
TPM3-205ENST00000328159 GGHQ92820 318 aa13.84□□□□□ -0.19
TPM3-205ENST00000328159 DOK1Q99704 481 aa13.84□□□□□ -0.19
TPM3-205ENST00000328159 COPS4Q9BT78 406 aa13.84□□□□□ -0.19
TPM3-205ENST00000328159 NAA50Q9GZZ1 169 aaKnown RBP13.84□□□□□ -0.19
TPM3-205ENST00000328159 GAREM1Q9H706 876 aa13.84□□□□□ -0.19
TPM3-205ENST00000328159 LIN28AQ9H9Z2 209 aaKnown RBP13.84□□□□□ -0.19
TPM3-205ENST00000328159 ZNF304Q9HCX3 659 aa13.84□□□□□ -0.19
TPM3-205ENST00000328159 Q9N2J8 555 aa13.84□□□□□ -0.19
TPM3-205ENST00000328159 CLN6Q9NWW5 311 aa13.84□□□□□ -0.19
TPM3-205ENST00000328159 A0A1B0GX78 115 aa13.83□□□□□ -0.19
TPM3-205ENST00000328159 TTC36A6NLP5 189 aa13.83□□□□□ -0.19
TPM3-205ENST00000328159 ENO4A6NNW6 628 aa13.83□□□□□ -0.19
TPM3-205ENST00000328159 CLCA1A8K7I4 914 aa13.83□□□□□ -0.19
TPM3-205ENST00000328159 H3BMQ9 156 aa13.83□□□□□ -0.19
TPM3-205ENST00000328159 TRMUO75648 421 aaKnown RBP13.83□□□□□ -0.19
TPM3-205ENST00000328159 CLPSP04118 112 aa13.83□□□□□ -0.19
TPM3-205ENST00000328159 GKN3PP0CG01 181 aa13.83□□□□□ -0.19
TPM3-205ENST00000328159 NUDT6P53370 316 aa13.83□□□□□ -0.19
TPM3-205ENST00000328159 GP2P55259 537 aaKnown RBP13.83□□□□□ -0.19
TPM3-205ENST00000328159 SNRPGP62308 76 aaKnown RBP13.83□□□□□ -0.19
TPM3-205ENST00000328159 MVKQ03426 396 aa13.83□□□□□ -0.19
TPM3-205ENST00000328159 PDZK1Q5T2W1 519 aa13.83□□□□□ -0.19
TPM3-205ENST00000328159 MFSD4BQ5TF39 518 aa13.83□□□□□ -0.19
TPM3-205ENST00000328159 CASP12Q6UXS9 341 aa13.83□□□□□ -0.19
TPM3-205ENST00000328159 QSOX2Q6ZRP7 698 aa13.83□□□□□ -0.19
TPM3-205ENST00000328159 ERI1Q8IV48 349 aaKnown RBP13.83□□□□□ -0.19
TPM3-205ENST00000328159 FAM181AQ8N9Y4 354 aa13.83□□□□□ -0.19
TPM3-205ENST00000328159 RCBTB1Q8NDN9 531 aa13.83□□□□□ -0.19
TPM3-205ENST00000328159 OR7G1Q8NGA0 311 aa13.83□□□□□ -0.19
TPM3-205ENST00000328159 PTPMT1Q8WUK0 201 aaPredicted RBP13.83□□□□□ -0.19
TPM3-205ENST00000328159 MYDGFQ969H8 173 aa13.83□□□□□ -0.19
TPM3-205ENST00000328159 COG8Q96MW5 612 aa13.83□□□□□ -0.19
TPM3-205ENST00000328159 NECAB3Q96P71 396 aaPredicted RBP13.83□□□□□ -0.19
TPM3-205ENST00000328159 EVA1AQ9H8M9 152 aa13.83□□□□□ -0.19
TPM3-205ENST00000328159 AMBNQ9NP70 447 aa13.83□□□□□ -0.19
TPM3-205ENST00000328159 PNO1Q9NRX1 252 aaKnown RBP13.83□□□□□ -0.19
TPM3-205ENST00000328159 PRODH2Q9UF12 536 aa13.83□□□□□ -0.19
TPM3-205ENST00000328159 SLC7A7Q9UM01 511 aa13.83□□□□□ -0.19
TPM3-205ENST00000328159 SEC16AO15027 2179 aa13.83□□□□□ -0.2
TPM3-205ENST00000328159 IGKV3D-11A0A0A0MRZ8 115 aa13.83□□□□□ -0.2
TPM3-205ENST00000328159 SH3D21A4FU49 640 aa13.83□□□□□ -0.2
TPM3-205ENST00000328159 TRAPPC13A5PLN9 417 aa13.83□□□□□ -0.2
TPM3-205ENST00000328159 FMO6PO60774 539 aa13.83□□□□□ -0.2
TPM3-205ENST00000328159 NOL3O60936 208 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms