RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 MRPL15Q9P015 296 aaKnown RBP13.85□□□□□ -0.19
TCOF1-201ENST00000323668 H3BSH0 61 aa13.85□□□□□ -0.19
TCOF1-201ENST00000323668 M0R082 166 aa13.85□□□□□ -0.19
TCOF1-201ENST00000323668 PLPP1O14494 284 aa13.85□□□□□ -0.19
TCOF1-201ENST00000323668 FCER2P06734 321 aa13.85□□□□□ -0.19
TCOF1-201ENST00000323668 EPCAMP16422 314 aa13.85□□□□□ -0.19
TCOF1-201ENST00000323668 CXCR1P25024 350 aa13.85□□□□□ -0.19
TCOF1-201ENST00000323668 IL12BP29460 328 aa13.85□□□□□ -0.19
TCOF1-201ENST00000323668 DDOSTP39656 456 aa13.85□□□□□ -0.19
TCOF1-201ENST00000323668 ACSM3Q53FZ2 586 aa13.85□□□□□ -0.19
TCOF1-201ENST00000323668 ALG10BQ5I7T1 473 aa13.85□□□□□ -0.19
TCOF1-201ENST00000323668 SDR16C5Q8N3Y7 309 aa13.85□□□□□ -0.19
TCOF1-201ENST00000323668 FAM26EQ8N5C1 309 aa13.85□□□□□ -0.19
TCOF1-201ENST00000323668 OR51L1Q8NGJ5 315 aa13.85□□□□□ -0.19
TCOF1-201ENST00000323668 BCL7CQ8WUZ0 217 aaPredicted RBP13.85□□□□□ -0.19
TCOF1-201ENST00000323668 SGTBQ96EQ0 304 aa13.85□□□□□ -0.19
TCOF1-201ENST00000323668 HRASLS2Q9NWW9 162 aa13.85□□□□□ -0.19
TCOF1-201ENST00000323668 MGAT4CQ9UBM8 478 aa13.85□□□□□ -0.19
TCOF1-201ENST00000323668 LAMP5Q9UJQ1 280 aa13.85□□□□□ -0.19
TCOF1-201ENST00000323668 KCNJ13O60928 360 aa13.85□□□□□ -0.19
TCOF1-201ENST00000323668 KRT33AO76009 404 aa13.85□□□□□ -0.19
TCOF1-201ENST00000323668 SYT14P1Q58G82 188 aa13.85□□□□□ -0.19
TCOF1-201ENST00000323668 PPP2R2DQ66LE6 453 aa13.85□□□□□ -0.19
TCOF1-201ENST00000323668 WDR53Q7Z5U6 358 aaPredicted RBP13.85□□□□□ -0.19
TCOF1-201ENST00000323668 DNAJC5GQ8N7S2 189 aa13.85□□□□□ -0.19
TCOF1-201ENST00000323668 SLC25A46Q96AG3 418 aa13.85□□□□□ -0.19
TCOF1-201ENST00000323668 KIAA1143Q96AT1 154 aaPredicted RBP13.85□□□□□ -0.19
TCOF1-201ENST00000323668 OR51J1Q9H342 316 aa13.85□□□□□ -0.19
TCOF1-201ENST00000323668 GLIPR2Q9H4G4 154 aa13.85□□□□□ -0.19
TCOF1-201ENST00000323668 EXO5Q9H790 373 aa13.85□□□□□ -0.19
TCOF1-201ENST00000323668 ALG5Q9Y673 324 aa13.85□□□□□ -0.19
TCOF1-201ENST00000323668 PTPRFP10586 1907 aa13.85□□□□□ -0.19
TCOF1-201ENST00000323668 CTBSQ01459 385 aa13.85□□□□□ -0.19
TCOF1-201ENST00000323668 COL9A2Q14055 689 aaPredicted RBP13.85□□□□□ -0.19
TCOF1-201ENST00000323668 TCTN3Q6NUS6 607 aa13.85□□□□□ -0.19
TCOF1-201ENST00000323668 THAP4Q8WY91 577 aa13.85□□□□□ -0.19
TCOF1-201ENST00000323668 SMARCD2Q92925 531 aa13.85□□□□□ -0.19
TCOF1-201ENST00000323668 C16orf58Q96GQ5 468 aa13.85□□□□□ -0.19
TCOF1-201ENST00000323668 RAD9AQ99638 391 aa13.85□□□□□ -0.19
TCOF1-201ENST00000323668 ZNF559Q9BR84 538 aa13.85□□□□□ -0.19
TCOF1-201ENST00000323668 TMEM150CB9EJG8 249 aa13.84□□□□□ -0.19
TCOF1-201ENST00000323668 SCDO00767 359 aa13.84□□□□□ -0.19
TCOF1-201ENST00000323668 NCR1O76036 304 aa13.84□□□□□ -0.19
TCOF1-201ENST00000323668 IGFBP1P08833 259 aaPredicted RBP13.84□□□□□ -0.19
TCOF1-201ENST00000323668 CBLP22681 906 aa13.84□□□□□ -0.19
TCOF1-201ENST00000323668 GPR143P51810 404 aa13.84□□□□□ -0.19
TCOF1-201ENST00000323668 OR8K3Q8NH51 312 aa13.84□□□□□ -0.19
TCOF1-201ENST00000323668 C11orf49Q9H6J7 331 aa13.84□□□□□ -0.19
TCOF1-201ENST00000323668 GRHPRQ9UBQ7 328 aa13.84□□□□□ -0.19
TCOF1-201ENST00000323668 NUBP2Q9Y5Y2 271 aa13.84□□□□□ -0.19
TCOF1-201ENST00000323668 TRAPPC2P0DI81 140 aa13.84□□□□□ -0.19
TCOF1-201ENST00000323668 TRAPPC2BP0DI82 140 aa13.84□□□□□ -0.19
TCOF1-201ENST00000323668 GIMD1P0DJR0 217 aa13.84□□□□□ -0.19
TCOF1-201ENST00000323668 UQCRC1P31930 480 aa13.84□□□□□ -0.19
TCOF1-201ENST00000323668 WNT3P56703 355 aa13.84□□□□□ -0.19
TCOF1-201ENST00000323668 DECR1Q16698 335 aa13.84□□□□□ -0.19
TCOF1-201ENST00000323668 LAS2Q8IYD9 372 aa13.84□□□□□ -0.19
TCOF1-201ENST00000323668 SLC35B4Q969S0 331 aa13.84□□□□□ -0.19
TCOF1-201ENST00000323668 BTBD2Q9BX70 525 aa13.84□□□□□ -0.19
TCOF1-201ENST00000323668 MED17Q9NVC6 651 aa13.84□□□□□ -0.19
TCOF1-201ENST00000323668 CCL27Q9Y4X3 112 aa13.84□□□□□ -0.19
TCOF1-201ENST00000323668 COL11A1P12107 1806 aaPredicted RBP13.84□□□□□ -0.19
TCOF1-201ENST00000323668 ZFC3H1O60293 1989 aaKnown RBP13.84□□□□□ -0.19
TCOF1-201ENST00000323668 A0A1B0GVI7 797 aa13.84□□□□□ -0.19
TCOF1-201ENST00000323668 CREBL2O60519 120 aaPredicted RBP13.84□□□□□ -0.19
TCOF1-201ENST00000323668 PPP1R3DO95685 299 aa13.84□□□□□ -0.19
TCOF1-201ENST00000323668 HOXB2P14652 356 aa13.84□□□□□ -0.19
TCOF1-201ENST00000323668 HTR3AP46098 478 aa13.84□□□□□ -0.19
TCOF1-201ENST00000323668 MEPCEQ7L2J0 689 aaKnown RBP13.84□□□□□ -0.19
TCOF1-201ENST00000323668 FTMTQ8N4E7 242 aa13.84□□□□□ -0.19
TCOF1-201ENST00000323668 CDRT4Q8N9R6 151 aa13.84□□□□□ -0.19
TCOF1-201ENST00000323668 RELTQ969Z4 430 aa13.84□□□□□ -0.19
TCOF1-201ENST00000323668 AMDHD1Q96NU7 426 aa13.84□□□□□ -0.19
TCOF1-201ENST00000323668 SLC38A3Q99624 504 aa13.84□□□□□ -0.19
TCOF1-201ENST00000323668 PCDHGA3Q9Y5H0 932 aa13.84□□□□□ -0.19
TCOF1-201ENST00000323668 TRDV1A0A1B0GX56 115 aa13.84□□□□□ -0.19
TCOF1-201ENST00000323668 DPM1O60762 260 aa13.84□□□□□ -0.19
TCOF1-201ENST00000323668 CD3GP09693 182 aa13.84□□□□□ -0.19
TCOF1-201ENST00000323668 GKN3PP0CG01 181 aa13.84□□□□□ -0.19
TCOF1-201ENST00000323668 HOXA9P31269 272 aa13.84□□□□□ -0.19
TCOF1-201ENST00000323668 TMED4Q7Z7H5 227 aa13.84□□□□□ -0.19
TCOF1-201ENST00000323668 PLPP6Q8IY26 295 aa13.84□□□□□ -0.19
TCOF1-201ENST00000323668 OPALINQ96PE5 141 aa13.84□□□□□ -0.19
TCOF1-201ENST00000323668 NEDD4LQ96PU5 975 aa13.84□□□□□ -0.19
TCOF1-201ENST00000323668 GPER1Q99527 375 aa13.84□□□□□ -0.19
TCOF1-201ENST00000323668 SLC17A9Q9BYT1 436 aa13.84□□□□□ -0.19
TCOF1-201ENST00000323668 VSX2P58304 361 aaPredicted RBP13.83□□□□□ -0.19
TCOF1-201ENST00000323668 FCRLBQ6BAA4 426 aa13.83□□□□□ -0.19
TCOF1-201ENST00000323668 TMPRSS12Q86WS5 348 aa13.83□□□□□ -0.19
TCOF1-201ENST00000323668 OR6N2Q8NGY6 317 aa13.83□□□□□ -0.19
TCOF1-201ENST00000323668 TM9SF4Q92544 642 aa13.83□□□□□ -0.19
TCOF1-201ENST00000323668 THRSPQ92748 146 aa13.83□□□□□ -0.19
TCOF1-201ENST00000323668 CDS1Q92903 461 aa13.83□□□□□ -0.19
TCOF1-201ENST00000323668 BPIFA2Q96DR5 249 aa13.83□□□□□ -0.19
TCOF1-201ENST00000323668 RBCK1Q9BYM8 510 aa13.83□□□□□ -0.19
TCOF1-201ENST00000323668 B3GNT4Q9C0J1 378 aa13.83□□□□□ -0.19
TCOF1-201ENST00000323668 PIGUQ9H490 435 aa13.83□□□□□ -0.19
TCOF1-201ENST00000323668 OR6C74A6NCV1 312 aa13.83□□□□□ -0.2
TCOF1-201ENST00000323668 C5AR1P21730 350 aa13.83□□□□□ -0.2
TCOF1-201ENST00000323668 MLLT3P42568 568 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms