RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 CCL27Q9Y4X3 112 aa11.88□□□□□ -0.51
SYCN-201ENST00000318438 MED12LQ86YW9 2145 aa11.87□□□□□ -0.51
SYCN-201ENST00000318438 CAPN14A8MX76 684 aa11.87□□□□□ -0.51
SYCN-201ENST00000318438 TP53I11O14683 189 aa11.87□□□□□ -0.51
SYCN-201ENST00000318438 GNB5O14775 395 aa11.87□□□□□ -0.51
SYCN-201ENST00000318438 TYROBPO43914 113 aa11.87□□□□□ -0.51
SYCN-201ENST00000318438 CHEK2O96017 543 aa11.87□□□□□ -0.51
SYCN-201ENST00000318438 CHRNGP07510 517 aa11.87□□□□□ -0.51
SYCN-201ENST00000318438 NEFHP12036 1026 aa11.87□□□□□ -0.51
SYCN-201ENST00000318438 DDCP20711 480 aa11.87□□□□□ -0.51
SYCN-201ENST00000318438 GPX3P22352 226 aa11.87□□□□□ -0.51
SYCN-201ENST00000318438 SERPINB5P36952 375 aa11.87□□□□□ -0.51
SYCN-201ENST00000318438 TMED10P49755 219 aaKnown RBP11.87□□□□□ -0.51
SYCN-201ENST00000318438 FBXW4P57775 412 aa11.87□□□□□ -0.51
SYCN-201ENST00000318438 SIRPAP78324 504 aa11.87□□□□□ -0.51
SYCN-201ENST00000318438 DUSP2Q05923 314 aa11.87□□□□□ -0.51
SYCN-201ENST00000318438 LIPNQ5VXI9 398 aa11.87□□□□□ -0.51
SYCN-201ENST00000318438 FAM180BQ6P0A1 224 aa11.87□□□□□ -0.51
SYCN-201ENST00000318438 PACS2Q86VP3 889 aa11.87□□□□□ -0.51
SYCN-201ENST00000318438 MEX3DQ86XN8 651 aaKnown RBP11.87□□□□□ -0.51
SYCN-201ENST00000318438 ZNF675Q8TD23 568 aa11.87□□□□□ -0.51
SYCN-201ENST00000318438 ADIPOR1Q96A54 375 aa11.87□□□□□ -0.51
SYCN-201ENST00000318438 EXOSC8Q96B26 276 aaKnown RBP11.87□□□□□ -0.51
SYCN-201ENST00000318438 ERP27Q96DN0 273 aa11.87□□□□□ -0.51
SYCN-201ENST00000318438 TMEM204Q9BSN7 226 aa11.87□□□□□ -0.51
SYCN-201ENST00000318438 ESRP2Q9H6T0 727 aaKnown RBP11.87□□□□□ -0.51
SYCN-201ENST00000318438 EML4Q9HC35 981 aaKnown RBP11.87□□□□□ -0.51
SYCN-201ENST00000318438 MYNNQ9NPC7 610 aa11.87□□□□□ -0.51
SYCN-201ENST00000318438 PFDN4Q9NQP4 134 aa11.87□□□□□ -0.51
SYCN-201ENST00000318438 GIMAP4Q9NUV9 329 aa11.87□□□□□ -0.51
SYCN-201ENST00000318438 ELOVL5Q9NYP7 299 aa11.87□□□□□ -0.51
SYCN-201ENST00000318438 GDF2Q9UK05 429 aaPredicted RBP11.87□□□□□ -0.51
SYCN-201ENST00000318438 WBP11Q9Y2W2 641 aaKnown RBP11.87□□□□□ -0.51
SYCN-201ENST00000318438 MAGED1Q9Y5V3 778 aaPredicted RBP11.87□□□□□ -0.51
SYCN-201ENST00000318438 FRG2CA6NGY1 282 aa11.86□□□□□ -0.51
SYCN-201ENST00000318438 SLC28A1O00337 649 aa11.86□□□□□ -0.51
SYCN-201ENST00000318438 RGS16O15492 202 aaPredicted RBP11.86□□□□□ -0.51
SYCN-201ENST00000318438 RGS14O43566 566 aa11.86□□□□□ -0.51
SYCN-201ENST00000318438 SNX4O95219 450 aa11.86□□□□□ -0.51
SYCN-201ENST00000318438 CBX7O95931 251 aa11.86□□□□□ -0.51
SYCN-201ENST00000318438 FGF4P08620 206 aa11.86□□□□□ -0.51
SYCN-201ENST00000318438 CREB1P16220 341 aa11.86□□□□□ -0.51
SYCN-201ENST00000318438 IGFBP5P24593 272 aa11.86□□□□□ -0.51
SYCN-201ENST00000318438 DPP4P27487 766 aa11.86□□□□□ -0.51
SYCN-201ENST00000318438 PTPN6P29350 595 aa11.86□□□□□ -0.51
SYCN-201ENST00000318438 ETV4P43268 484 aa11.86□□□□□ -0.51
SYCN-201ENST00000318438 STARP49675 285 aa11.86□□□□□ -0.51
SYCN-201ENST00000318438 NRG3P56975 720 aa11.86□□□□□ -0.51
SYCN-201ENST00000318438 VLDLRP98155 873 aa11.86□□□□□ -0.51
SYCN-201ENST00000318438 FAPQ12884 760 aa11.86□□□□□ -0.51
SYCN-201ENST00000318438 KIAA0040Q15053 153 aa11.86□□□□□ -0.51
SYCN-201ENST00000318438 RPS6KA2Q15349 733 aa11.86□□□□□ -0.51
SYCN-201ENST00000318438 LTB4RQ15722 352 aa11.86□□□□□ -0.51
SYCN-201ENST00000318438 FAM174BQ3ZCQ3 159 aa11.86□□□□□ -0.51
SYCN-201ENST00000318438 ZNF628Q5EBL2 1059 aa11.86□□□□□ -0.51
SYCN-201ENST00000318438 FAM71E1Q6IPT2 247 aa11.86□□□□□ -0.51
SYCN-201ENST00000318438 NOXRED1Q6NXP6 359 aa11.86□□□□□ -0.51
SYCN-201ENST00000318438 FAM111BQ6SJ93 734 aa11.86□□□□□ -0.51
SYCN-201ENST00000318438 IKBIPQ70UQ0 350 aa11.86□□□□□ -0.51
SYCN-201ENST00000318438 ADCY4Q8NFM4 1077 aa11.86□□□□□ -0.51
SYCN-201ENST00000318438 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.86□□□□□ -0.51
SYCN-201ENST00000318438 SPPL2AQ8TCT8 520 aa11.86□□□□□ -0.51
SYCN-201ENST00000318438 C1orf159Q96HA4 380 aa11.86□□□□□ -0.51
SYCN-201ENST00000318438 TNFRSF13CQ96RJ3 184 aa11.86□□□□□ -0.51
SYCN-201ENST00000318438 RHNO1Q9BSD3 238 aa11.86□□□□□ -0.51
SYCN-201ENST00000318438 SSU72Q9NP77 194 aaKnown RBP11.86□□□□□ -0.51
SYCN-201ENST00000318438 SLC35C2Q9NQQ7 365 aa11.86□□□□□ -0.51
SYCN-201ENST00000318438 FIS1Q9Y3D6 152 aa11.86□□□□□ -0.51
SYCN-201ENST00000318438 POLR3HQ9Y535 204 aaPredicted RBP11.86□□□□□ -0.51
SYCN-201ENST00000318438 DNAJC15Q9Y5T4 150 aa11.86□□□□□ -0.51
SYCN-201ENST00000318438 PTGDR2Q9Y5Y4 395 aa11.86□□□□□ -0.51
SYCN-201ENST00000318438 FAM234BA2RU67 622 aa11.85□□□□□ -0.51
SYCN-201ENST00000318438 PLOD2O00469 737 aa11.85□□□□□ -0.51
SYCN-201ENST00000318438 SEC22BO75396 215 aa11.85□□□□□ -0.51
SYCN-201ENST00000318438 BPGMP07738 259 aa11.85□□□□□ -0.51
SYCN-201ENST00000318438 THBS1P07996 1170 aa11.85□□□□□ -0.51
SYCN-201ENST00000318438 DANCRP0C864 163 aa11.85□□□□□ -0.51
SYCN-201ENST00000318438 CHMP24386 653 aa11.85□□□□□ -0.51
SYCN-201ENST00000318438 MPIP34949 423 aa11.85□□□□□ -0.51
SYCN-201ENST00000318438 KIR2DL2P43627 348 aaPredicted RBP11.85□□□□□ -0.51
SYCN-201ENST00000318438 MRPS35P82673 323 aaKnown RBP11.85□□□□□ -0.51
SYCN-201ENST00000318438 EXOSC7Q15024 291 aaKnown RBP11.85□□□□□ -0.51
SYCN-201ENST00000318438 TRMT12Q53H54 448 aaKnown RBP11.85□□□□□ -0.51
SYCN-201ENST00000318438 ARL13AQ5H913 290 aaPredicted RBP11.85□□□□□ -0.51
SYCN-201ENST00000318438 Q6ZSR9 355 aa11.85□□□□□ -0.51
SYCN-201ENST00000318438 P4HA3Q7Z4N8 544 aa11.85□□□□□ -0.51
SYCN-201ENST00000318438 CROCCP2Q86T23 111 aa11.85□□□□□ -0.51
SYCN-201ENST00000318438 TRIM42Q8IWZ5 723 aa11.85□□□□□ -0.51
SYCN-201ENST00000318438 CCDC116Q8IYX3 515 aa11.85□□□□□ -0.51
SYCN-201ENST00000318438 ZNF610Q8N9Z0 462 aa11.85□□□□□ -0.51
SYCN-201ENST00000318438 OR52R1Q8NGF1 315 aa11.85□□□□□ -0.51
SYCN-201ENST00000318438 OR9A2Q8NGT5 310 aa11.85□□□□□ -0.51
SYCN-201ENST00000318438 OR2T11Q8NH01 316 aa11.85□□□□□ -0.51
SYCN-201ENST00000318438 LILRB1Q8NHL6 650 aaPredicted RBP11.85□□□□□ -0.51
SYCN-201ENST00000318438 CDC26Q8NHZ8 85 aa11.85□□□□□ -0.51
SYCN-201ENST00000318438 RAB3IL1Q8TBN0 382 aa11.85□□□□□ -0.51
SYCN-201ENST00000318438 TWIST2Q8WVJ9 160 aa11.85□□□□□ -0.51
SYCN-201ENST00000318438 FCRL1Q96LA6 429 aa11.85□□□□□ -0.51
SYCN-201ENST00000318438 HS6ST2Q96MM7 605 aa11.85□□□□□ -0.51
SYCN-201ENST00000318438 ITPAQ9BY32 194 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms