RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 LCN1P31025 176 aa16.05■□□□□ 0.16
TPM1-203ENST00000317516 MAP3K8P41279 467 aa16.05■□□□□ 0.16
TPM1-203ENST00000317516 SERPINB4P48594 390 aa16.05■□□□□ 0.16
TPM1-203ENST00000317516 PRIM2P49643 509 aa16.05■□□□□ 0.16
TPM1-203ENST00000317516 ART1P52961 327 aa16.05■□□□□ 0.16
TPM1-203ENST00000317516 RPS3AP61247 264 aaKnown RBP16.05■□□□□ 0.16
TPM1-203ENST00000317516 LUZP2Q86TE4 346 aa16.05■□□□□ 0.16
TPM1-203ENST00000317516 EXOC3L1Q86VI1 746 aa16.05■□□□□ 0.16
TPM1-203ENST00000317516 UBQLNLQ8IYU4 475 aa16.05■□□□□ 0.16
TPM1-203ENST00000317516 GCNT2Q8N0V5 402 aa16.05■□□□□ 0.16
TPM1-203ENST00000317516 TMEM109Q9BVC6 243 aa16.05■□□□□ 0.16
TPM1-203ENST00000317516 PACSIN3Q9UKS6 424 aa16.05■□□□□ 0.16
TPM1-203ENST00000317516 ZNF337Q9Y3M9 751 aa16.05■□□□□ 0.16
TPM1-203ENST00000317516 CSMD2Q7Z408 3487 aa16.04■□□□□ 0.16
TPM1-203ENST00000317516 A0A1W2PRB8 838 aa16.04■□□□□ 0.16
TPM1-203ENST00000317516 OR2M5A3KFT3 312 aa16.04■□□□□ 0.16
TPM1-203ENST00000317516 C17orf51A8MQB3 221 aa16.04■□□□□ 0.16
TPM1-203ENST00000317516 B4DXG7 233 aa16.04■□□□□ 0.16
TPM1-203ENST00000317516 ALG1L2C9J202 215 aa16.04■□□□□ 0.16
TPM1-203ENST00000317516 NDUFB5O43674 189 aa16.04■□□□□ 0.16
TPM1-203ENST00000317516 BPGMP07738 259 aa16.04■□□□□ 0.16
TPM1-203ENST00000317516 NGFRP08138 427 aa16.04■□□□□ 0.16
TPM1-203ENST00000317516 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.04■□□□□ 0.16
TPM1-203ENST00000317516 GRAMD1BQ3KR37 738 aa16.04■□□□□ 0.16
TPM1-203ENST00000317516 CPTPQ5TA50 214 aa16.04■□□□□ 0.16
TPM1-203ENST00000317516 ZCCHC23Q6ZST2 131 aa16.04■□□□□ 0.16
TPM1-203ENST00000317516 SLC16A11Q8NCK7 471 aa16.04■□□□□ 0.16
TPM1-203ENST00000317516 PPP1R14CQ8TAE6 165 aa16.04■□□□□ 0.16
TPM1-203ENST00000317516 LINC01560Q8TB33 94 aa16.04■□□□□ 0.16
TPM1-203ENST00000317516 DACH2Q96NX9 599 aa16.04■□□□□ 0.16
TPM1-203ENST00000317516 YIPF4Q9BSR8 244 aa16.04■□□□□ 0.16
TPM1-203ENST00000317516 RTN4RQ9BZR6 473 aa16.04■□□□□ 0.16
TPM1-203ENST00000317516 UBQLN4Q9NRR5 601 aa16.04■□□□□ 0.16
TPM1-203ENST00000317516 NDRG3Q9UGV2 375 aa16.04■□□□□ 0.16
TPM1-203ENST00000317516 AP4B1Q9Y6B7 739 aa16.04■□□□□ 0.16
TPM1-203ENST00000317516 ANKRD17O75179 2603 aaKnown RBP16.03■□□□□ 0.16
TPM1-203ENST00000317516 F8P00451 2351 aa16.03■□□□□ 0.16
TPM1-203ENST00000317516 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.03■□□□□ 0.16
TPM1-203ENST00000317516 A0A087WZY1 265 aa16.03■□□□□ 0.16
TPM1-203ENST00000317516 A8MXE2 369 aa16.03■□□□□ 0.16
TPM1-203ENST00000317516 H3BML4 177 aa16.03■□□□□ 0.16
TPM1-203ENST00000317516 MSTNO14793 375 aa16.03■□□□□ 0.16
TPM1-203ENST00000317516 CASKO14936 926 aa16.03■□□□□ 0.16
TPM1-203ENST00000317516 SCAMP2O15127 329 aaKnown RBP16.03■□□□□ 0.16
TPM1-203ENST00000317516 CTIFO43310 598 aaKnown RBP16.03■□□□□ 0.16
TPM1-203ENST00000317516 KCNK2O95069 426 aa16.03■□□□□ 0.16
TPM1-203ENST00000317516 TGM6O95932 706 aa16.03■□□□□ 0.16
TPM1-203ENST00000317516 IGKV1D-16P01601 117 aa16.03■□□□□ 0.16
TPM1-203ENST00000317516 TBXA2RP21731 343 aa16.03■□□□□ 0.16
TPM1-203ENST00000317516 IST1P53990 364 aa16.03■□□□□ 0.16
TPM1-203ENST00000317516 OCRLQ01968 901 aa16.03■□□□□ 0.16
TPM1-203ENST00000317516 LSM12Q3MHD2 195 aaKnown RBP16.03■□□□□ 0.16
TPM1-203ENST00000317516 XKR7Q5GH72 579 aa16.03■□□□□ 0.16
TPM1-203ENST00000317516 C6orf136Q5SQH8 315 aa16.03■□□□□ 0.16
TPM1-203ENST00000317516 MFSD12Q6NUT3 480 aa16.03■□□□□ 0.16
TPM1-203ENST00000317516 PLXDC2Q6UX71 529 aa16.03■□□□□ 0.16
TPM1-203ENST00000317516 CDC20BQ86Y33 519 aa16.03■□□□□ 0.16
TPM1-203ENST00000317516 NUDCD3Q8IVD9 361 aa16.03■□□□□ 0.16
TPM1-203ENST00000317516 MISPQ8IVT2 679 aa16.03■□□□□ 0.16
TPM1-203ENST00000317516 COX18Q8N8Q8 333 aa16.03■□□□□ 0.16
TPM1-203ENST00000317516 FNDC5Q8NAU1 212 aa16.03■□□□□ 0.16
TPM1-203ENST00000317516 OR4C3Q8NH37 302 aa16.03■□□□□ 0.16
TPM1-203ENST00000317516 FAM110BQ8TC76 370 aa16.03■□□□□ 0.16
TPM1-203ENST00000317516 OR5P2Q8WZ92 322 aa16.03■□□□□ 0.16
TPM1-203ENST00000317516 JADE3Q92613 823 aa16.03■□□□□ 0.16
TPM1-203ENST00000317516 NRGNQ92686 78 aa16.03■□□□□ 0.16
TPM1-203ENST00000317516 GIMAP5Q96F15 307 aa16.03■□□□□ 0.16
TPM1-203ENST00000317516 CHMP6Q96FZ7 201 aa16.03■□□□□ 0.16
TPM1-203ENST00000317516 ZCCHC3Q9NUD5 404 aaKnown RBP16.03■□□□□ 0.16
TPM1-203ENST00000317516 GALNT8Q9NY28 637 aa16.03■□□□□ 0.16
TPM1-203ENST00000317516 ZDHHC2Q9UIJ5 367 aa16.03■□□□□ 0.16
TPM1-203ENST00000317516 EIF3LQ9Y262 564 aaKnown RBP16.03■□□□□ 0.16
TPM1-203ENST00000317516 ZNF175Q9Y473 711 aa16.03■□□□□ 0.16
TPM1-203ENST00000317516 SNX8Q9Y5X2 465 aa16.03■□□□□ 0.16
TPM1-203ENST00000317516 EXPH5Q8NEV8 1989 aa16.03■□□□□ 0.16
TPM1-203ENST00000317516 TEP1Q99973 2627 aaKnown RBP16.02■□□□□ 0.16
TPM1-203ENST00000317516 ARHGAP21Q5T5U3 1957 aa16.02■□□□□ 0.16
TPM1-203ENST00000317516 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.02■□□□□ 0.16
TPM1-203ENST00000317516 A0A1W2PNV4 684 aa16.02■□□□□ 0.16
TPM1-203ENST00000317516 SCDO00767 359 aa16.02■□□□□ 0.16
TPM1-203ENST00000317516 SEC14L5O43304 696 aa16.02■□□□□ 0.16
TPM1-203ENST00000317516 TYROBPO43914 113 aa16.02■□□□□ 0.16
TPM1-203ENST00000317516 TNFSF13O75888 250 aa16.02■□□□□ 0.16
TPM1-203ENST00000317516 OXSR1O95747 527 aaPredicted RBP16.02■□□□□ 0.16
TPM1-203ENST00000317516 KRT16P08779 473 aa16.02■□□□□ 0.16
TPM1-203ENST00000317516 ACP2P11117 423 aa16.02■□□□□ 0.16
TPM1-203ENST00000317516 PRPS1L1P21108 318 aa16.02■□□□□ 0.16
TPM1-203ENST00000317516 DNASE1P24855 282 aa16.02■□□□□ 0.16
TPM1-203ENST00000317516 MAD2L1Q13257 205 aaPredicted RBP16.02■□□□□ 0.16
TPM1-203ENST00000317516 FGFBP1Q14512 234 aa16.02■□□□□ 0.16
TPM1-203ENST00000317516 SGCBQ16585 318 aa16.02■□□□□ 0.16
TPM1-203ENST00000317516 DUSP5Q16690 384 aa16.02■□□□□ 0.16
TPM1-203ENST00000317516 IL23RQ5VWK5 629 aa16.02■□□□□ 0.16
TPM1-203ENST00000317516 FIGNL1Q6PIW4 674 aa16.02■□□□□ 0.16
TPM1-203ENST00000317516 APOOLQ6UXV4 268 aa16.02■□□□□ 0.16
TPM1-203ENST00000317516 CNEP1R1Q8N9A8 125 aa16.02■□□□□ 0.16
TPM1-203ENST00000317516 OR7A2PQ8NGA2 310 aa16.02■□□□□ 0.16
TPM1-203ENST00000317516 OR5M1Q8NGP8 315 aa16.02■□□□□ 0.16
TPM1-203ENST00000317516 TUBGCP3Q96CW5 907 aa16.02■□□□□ 0.16
TPM1-203ENST00000317516 FAM120BQ96EK7 910 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms