RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 LMF2Q9BU23 707 aaKnown RBP17.05■□□□□ 0.32
CCDC43-201ENST00000315286 DSN1Q9H410 356 aa17.05■□□□□ 0.32
CCDC43-201ENST00000315286 SLC7A7Q9UM01 511 aa17.05■□□□□ 0.32
CCDC43-201ENST00000315286 H0YIG0 161 aa17.04■□□□□ 0.32
CCDC43-201ENST00000315286 M0R082 166 aa17.04■□□□□ 0.32
CCDC43-201ENST00000315286 HTR2AP28223 471 aa17.04■□□□□ 0.32
CCDC43-201ENST00000315286 TSPAN31Q12999 210 aa17.04■□□□□ 0.32
CCDC43-201ENST00000315286 IRF3Q14653 427 aa17.04■□□□□ 0.32
CCDC43-201ENST00000315286 TMEM201Q5SNT2 666 aa17.04■□□□□ 0.32
CCDC43-201ENST00000315286 BCDIN3DQ7Z5W3 292 aaKnown RBP17.04■□□□□ 0.32
CCDC43-201ENST00000315286 P2RY8Q86VZ1 359 aa17.04■□□□□ 0.32
CCDC43-201ENST00000315286 PIGXQ8TBF5 258 aa17.04■□□□□ 0.32
CCDC43-201ENST00000315286 ITPAQ9BY32 194 aa17.04■□□□□ 0.32
CCDC43-201ENST00000315286 ERVMER34-1Q9H9K5 563 aa17.04■□□□□ 0.32
CCDC43-201ENST00000315286 TAS2R16Q9NYV7 291 aa17.04■□□□□ 0.32
CCDC43-201ENST00000315286 CNOT2Q9NZN8 540 aaKnown RBP17.04■□□□□ 0.32
CCDC43-201ENST00000315286 DTX4Q9Y2E6 619 aa17.04■□□□□ 0.32
CCDC43-201ENST00000315286 PI4KAP42356 2102 aa17.04■□□□□ 0.32
CCDC43-201ENST00000315286 H3BMH7 237 aa17.03■□□□□ 0.32
CCDC43-201ENST00000315286 PRKYO43930 277 aa17.03■□□□□ 0.32
CCDC43-201ENST00000315286 GLB1P16278 677 aa17.03■□□□□ 0.32
CCDC43-201ENST00000315286 TGFBR2P37173 567 aa17.03■□□□□ 0.32
CCDC43-201ENST00000315286 LIPAP38571 399 aa17.03■□□□□ 0.32
CCDC43-201ENST00000315286 LSM3P62310 102 aaKnown RBP17.03■□□□□ 0.32
CCDC43-201ENST00000315286 SHBQ15464 509 aa17.03■□□□□ 0.32
CCDC43-201ENST00000315286 SNAP47Q5SQN1 464 aa17.03■□□□□ 0.32
CCDC43-201ENST00000315286 AP1ARQ63HQ0 302 aa17.03■□□□□ 0.32
CCDC43-201ENST00000315286 RANBP3LQ86VV4 465 aaPredicted RBP17.03■□□□□ 0.32
CCDC43-201ENST00000315286 NRMQ8IXM6 262 aa17.03■□□□□ 0.32
CCDC43-201ENST00000315286 GAB3Q8WWW8 586 aa17.03■□□□□ 0.32
CCDC43-201ENST00000315286 Q96MT0 163 aa17.03■□□□□ 0.32
CCDC43-201ENST00000315286 VSTM2LQ96N03 204 aa17.03■□□□□ 0.32
CCDC43-201ENST00000315286 POLE3Q9NRF9 147 aa17.03■□□□□ 0.32
CCDC43-201ENST00000315286 CSNK1G3Q9Y6M4 447 aa17.03■□□□□ 0.32
CCDC43-201ENST00000315286 C19orf67A6NJJ6 358 aa17.03■□□□□ 0.32
CCDC43-201ENST00000315286 TLX2O43763 284 aaPredicted RBP17.03■□□□□ 0.32
CCDC43-201ENST00000315286 HYAL3O43820 417 aaPredicted RBP17.03■□□□□ 0.32
CCDC43-201ENST00000315286 OR2B3O76000 313 aa17.03■□□□□ 0.32
CCDC43-201ENST00000315286 PTHP01270 115 aa17.03■□□□□ 0.32
CCDC43-201ENST00000315286 IGKV1D-16P01601 117 aa17.03■□□□□ 0.32
CCDC43-201ENST00000315286 ADORA3P0DMS8 318 aa17.03■□□□□ 0.32
CCDC43-201ENST00000315286 CD36P16671 472 aa17.03■□□□□ 0.32
CCDC43-201ENST00000315286 GPR3P46089 330 aa17.03■□□□□ 0.32
CCDC43-201ENST00000315286 PCYT1AP49585 367 aa17.03■□□□□ 0.32
CCDC43-201ENST00000315286 HSD17B7P56937 341 aa17.03■□□□□ 0.32
CCDC43-201ENST00000315286 HSD11B2P80365 405 aa17.03■□□□□ 0.32
CCDC43-201ENST00000315286 PLAURQ03405 335 aa17.03■□□□□ 0.32
CCDC43-201ENST00000315286 ZNHIT3Q15649 155 aaPredicted RBP17.03■□□□□ 0.32
CCDC43-201ENST00000315286 FLYWCH1Q4VC44 716 aa17.03■□□□□ 0.32
CCDC43-201ENST00000315286 TTLL10Q6ZVT0 673 aa17.03■□□□□ 0.32
CCDC43-201ENST00000315286 MBOAT2Q6ZWT7 520 aa17.03■□□□□ 0.32
CCDC43-201ENST00000315286 DEFB123Q8N688 67 aa17.03■□□□□ 0.32
CCDC43-201ENST00000315286 OR8D4Q8NGM9 314 aa17.03■□□□□ 0.32
CCDC43-201ENST00000315286 TBC1D15Q8TC07 691 aa17.03■□□□□ 0.32
CCDC43-201ENST00000315286 PMM1Q92871 262 aa17.03■□□□□ 0.32
CCDC43-201ENST00000315286 CNPPD1Q9BV87 410 aa17.03■□□□□ 0.32
CCDC43-201ENST00000315286 POLDIP3Q9BY77 421 aaKnown RBP17.03■□□□□ 0.32
CCDC43-201ENST00000315286 NECTIN3Q9NQS3 549 aa17.03■□□□□ 0.32
CCDC43-201ENST00000315286 CUTCQ9NTM9 273 aa17.03■□□□□ 0.32
CCDC43-201ENST00000315286 TMEM150CB9EJG8 249 aa17.02■□□□□ 0.32
CCDC43-201ENST00000315286 ZNF749O43361 778 aa17.02■□□□□ 0.32
CCDC43-201ENST00000315286 PIP5K1CO60331 668 aa17.02■□□□□ 0.32
CCDC43-201ENST00000315286 PTNP21246 168 aa17.02■□□□□ 0.32
CCDC43-201ENST00000315286 CSF2RBP32927 897 aa17.02■□□□□ 0.32
CCDC43-201ENST00000315286 RGS19P49795 217 aa17.02■□□□□ 0.32
CCDC43-201ENST00000315286 PGDP52209 483 aa17.02■□□□□ 0.32
CCDC43-201ENST00000315286 EFNB1P98172 346 aa17.02■□□□□ 0.32
CCDC43-201ENST00000315286 BNC1Q01954 994 aa17.02■□□□□ 0.32
CCDC43-201ENST00000315286 TIGD6Q17RP2 521 aa17.02■□□□□ 0.32
CCDC43-201ENST00000315286 PLAG1Q6DJT9 500 aa17.02■□□□□ 0.32
CCDC43-201ENST00000315286 RASSF6Q6ZTQ3 369 aa17.02■□□□□ 0.32
CCDC43-201ENST00000315286 ZBTB46Q86UZ6 589 aa17.02■□□□□ 0.32
CCDC43-201ENST00000315286 PLXDC1Q8IUK5 500 aa17.02■□□□□ 0.32
CCDC43-201ENST00000315286 BCL7BQ9BQE9 202 aa17.02■□□□□ 0.32
CCDC43-201ENST00000315286 PRSS27Q9BQR3 290 aa17.02■□□□□ 0.32
CCDC43-201ENST00000315286 CDCA4Q9BXL8 241 aa17.02■□□□□ 0.32
CCDC43-201ENST00000315286 MUTYHQ9UIF7 546 aa17.02■□□□□ 0.32
CCDC43-201ENST00000315286 ERVK-19Q9WJR5 959 aa17.02■□□□□ 0.32
CCDC43-201ENST00000315286 DUX1O43812 170 aa17.01■□□□□ 0.31
CCDC43-201ENST00000315286 SOX30O94993 753 aa17.01■□□□□ 0.31
CCDC43-201ENST00000315286 ALAS2P22557 587 aa17.01■□□□□ 0.31
CCDC43-201ENST00000315286 GPR4P46093 362 aa17.01■□□□□ 0.31
CCDC43-201ENST00000315286 OR1D4P47884 311 aa17.01■□□□□ 0.31
CCDC43-201ENST00000315286 ARL4DP49703 201 aa17.01■□□□□ 0.31
CCDC43-201ENST00000315286 SMSP52788 366 aa17.01■□□□□ 0.31
CCDC43-201ENST00000315286 EMP3P54852 163 aa17.01■□□□□ 0.31
CCDC43-201ENST00000315286 VBP1P61758 197 aa17.01■□□□□ 0.31
CCDC43-201ENST00000315286 OR1Q1Q15612 314 aa17.01■□□□□ 0.31
CCDC43-201ENST00000315286 OCLNQ16625 522 aa17.01■□□□□ 0.31
CCDC43-201ENST00000315286 MFSD4BQ5TF39 518 aa17.01■□□□□ 0.31
CCDC43-201ENST00000315286 PRAMEF17Q5VTA0 474 aa17.01■□□□□ 0.31
CCDC43-201ENST00000315286 NPSR1Q6W5P4 371 aa17.01■□□□□ 0.31
CCDC43-201ENST00000315286 FAM26EQ8N5C1 309 aa17.01■□□□□ 0.31
CCDC43-201ENST00000315286 TOR1AIP2Q8NFQ8 470 aa17.01■□□□□ 0.31
CCDC43-201ENST00000315286 TEX47Q8TBZ9 253 aa17.01■□□□□ 0.31
CCDC43-201ENST00000315286 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.01■□□□□ 0.31
CCDC43-201ENST00000315286 ARSGQ96EG1 525 aa17.01■□□□□ 0.31
CCDC43-201ENST00000315286 ELF4Q99607 663 aaPredicted RBP17.01■□□□□ 0.31
CCDC43-201ENST00000315286 TRAPPC13A5PLN9 417 aa17.01■□□□□ 0.31
CCDC43-201ENST00000315286 A8MU76 341 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms