RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 DMPKQ09013 629 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 SPHARQ15513 63 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 PROX2Q3B8N5 592 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 ABHD17BQ5VST6 288 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 MFSD12Q6NUT3 480 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 MAMDC2Q7Z304 686 aaPredicted RBP12.79□□□□□ -0.36
DDX54-202ENST00000314045 NPLQ9BXD5 320 aaPredicted RBP12.79□□□□□ -0.36
DDX54-202ENST00000314045 ULBP3Q9BZM4 244 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 PCED1AQ9H1Q7 454 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 LAMP5Q9UJQ1 280 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 PCDHGA8Q9Y5G5 932 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 SLC22A31A6NKX4 558 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 CCRL2O00421 344 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 SSTR4P31391 388 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 POLR2IP36954 125 aaKnown RBP12.79□□□□□ -0.36
DDX54-202ENST00000314045 MTNR1AP48039 350 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 GFERP55789 205 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 CTXN1P60606 82 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 GK3PQ14409 553 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 RNASE12Q5GAN4 147 aaKnown RBP12.79□□□□□ -0.36
DDX54-202ENST00000314045 ENTPD8Q5MY95 495 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 KLHL17Q6TDP4 642 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 PAMR1Q6UXH9 720 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 KIAA0907Q7Z7F0 614 aaPredicted RBP12.79□□□□□ -0.36
DDX54-202ENST00000314045 FAM86B1Q8N7N1 296 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 TM9SF2Q99805 663 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 OR10A5Q9H207 317 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 ADAM23O75077 832 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 NDUFB2O95178 105 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 FUT1P19526 365 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 MAOAP21397 527 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 DCAF7P61962 342 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 CEP78Q5JTW2 689 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 PLBD1Q6P4A8 553 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 P4HA3Q7Z4N8 544 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 ANKRD53Q8N9V6 530 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 SENP5Q96HI0 755 aaPredicted RBP12.79□□□□□ -0.36
DDX54-202ENST00000314045 IKZF5Q9H5V7 419 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 RNF215Q9Y6U7 377 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 ZNF236Q9UL36 1845 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 MAP3K8P41279 467 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 SLC6A8P48029 635 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 SLC6A9P48067 706 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 UBQLNLQ8IYU4 475 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 CADM4Q8NFZ8 388 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 OR14A16Q8NHC5 309 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 CTRCQ99895 268 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 SLC6A20Q9NP91 592 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 SH2B3Q9UQQ2 575 aa12.79□□□□□ -0.36
DDX54-202ENST00000314045 SH3D21A4FU49 640 aa12.78□□□□□ -0.36
DDX54-202ENST00000314045 PRAMEF10O60809 474 aa12.78□□□□□ -0.36
DDX54-202ENST00000314045 ARL6IP5O75915 188 aa12.78□□□□□ -0.36
DDX54-202ENST00000314045 ALPLP05186 524 aa12.78□□□□□ -0.36
DDX54-202ENST00000314045 PRR35P0CG20 571 aa12.78□□□□□ -0.36
DDX54-202ENST00000314045 HOXC12P31275 282 aa12.78□□□□□ -0.36
DDX54-202ENST00000314045 CYB561A3Q8NBI2 242 aa12.78□□□□□ -0.36
DDX54-202ENST00000314045 TRUB1Q8WWH5 349 aaKnown RBP12.78□□□□□ -0.36
DDX54-202ENST00000314045 PNPLA2Q96AD5 504 aa12.78□□□□□ -0.36
DDX54-202ENST00000314045 MCUBQ9NWR8 336 aa12.78□□□□□ -0.36
DDX54-202ENST00000314045 SEC14L4Q9UDX3 406 aa12.78□□□□□ -0.36
DDX54-202ENST00000314045 VDAC3Q9Y277 283 aa12.78□□□□□ -0.36
DDX54-202ENST00000314045 MMACHCQ9Y4U1 282 aa12.78□□□□□ -0.36
DDX54-202ENST00000314045 SLC22A7Q9Y694 548 aa12.78□□□□□ -0.36
DDX54-202ENST00000314045 CNOT1A5YKK6 2376 aaKnown RBP12.78□□□□□ -0.36
DDX54-202ENST00000314045 TRBV11-1A0A0K0K1C0 115 aa12.78□□□□□ -0.36
DDX54-202ENST00000314045 FAM240BA0A1B0GVZ2 78 aa12.78□□□□□ -0.36
DDX54-202ENST00000314045 CCDC182A6NF36 153 aa12.78□□□□□ -0.36
DDX54-202ENST00000314045 SAGE2PA6NJ88 616 aa12.78□□□□□ -0.36
DDX54-202ENST00000314045 EIF1AYO14602 144 aaKnown RBP12.78□□□□□ -0.36
DDX54-202ENST00000314045 TFECO14948 347 aaPredicted RBP12.78□□□□□ -0.36
DDX54-202ENST00000314045 GALR3O60755 368 aaPredicted RBP12.78□□□□□ -0.36
DDX54-202ENST00000314045 KHDRBS3O75525 346 aaKnown RBP12.78□□□□□ -0.36
DDX54-202ENST00000314045 ITGA10O75578 1167 aa12.78□□□□□ -0.36
DDX54-202ENST00000314045 PABPC4LP0CB38 370 aaKnown RBP12.78□□□□□ -0.36
DDX54-202ENST00000314045 PRKAR1AP10644 381 aa12.78□□□□□ -0.36
DDX54-202ENST00000314045 PNMTP11086 282 aa12.78□□□□□ -0.36
DDX54-202ENST00000314045 HSD17B7P56937 341 aa12.78□□□□□ -0.36
DDX54-202ENST00000314045 VBP1P61758 197 aa12.78□□□□□ -0.36
DDX54-202ENST00000314045 FZD2Q14332 565 aa12.78□□□□□ -0.36
DDX54-202ENST00000314045 QPRTQ15274 297 aa12.78□□□□□ -0.36
DDX54-202ENST00000314045 TRMT12Q53H54 448 aaKnown RBP12.78□□□□□ -0.36
DDX54-202ENST00000314045 ULK3Q6PHR2 472 aa12.78□□□□□ -0.36
DDX54-202ENST00000314045 TMEM64Q6YI46 380 aa12.78□□□□□ -0.36
DDX54-202ENST00000314045 NSMAFQ92636 917 aa12.78□□□□□ -0.36
DDX54-202ENST00000314045 BPIFA2Q96DR5 249 aa12.78□□□□□ -0.36
DDX54-202ENST00000314045 GAL3ST1Q99999 423 aa12.78□□□□□ -0.36
DDX54-202ENST00000314045 TRPV5Q9NQA5 729 aa12.78□□□□□ -0.36
DDX54-202ENST00000314045 B4GALT7Q9UBV7 327 aa12.78□□□□□ -0.36
DDX54-202ENST00000314045 HEMK1Q9Y5R4 338 aaPredicted RBP12.78□□□□□ -0.36
DDX54-202ENST00000314045 LCTP09848 1927 aa12.78□□□□□ -0.36
DDX54-202ENST00000314045 IGHV1OR15-9A0A0B4J2B8 117 aa12.78□□□□□ -0.36
DDX54-202ENST00000314045 SIGLEC6O43699 453 aa12.78□□□□□ -0.36
DDX54-202ENST00000314045 CDRT1O95170 752 aa12.78□□□□□ -0.36
DDX54-202ENST00000314045 NME1P15531 152 aaKnown RBP12.78□□□□□ -0.36
DDX54-202ENST00000314045 ZNF182P17025 639 aaPredicted RBP12.78□□□□□ -0.36
DDX54-202ENST00000314045 PYCR1P32322 319 aa12.78□□□□□ -0.36
DDX54-202ENST00000314045 EFR3AQ14156 821 aa12.78□□□□□ -0.36
DDX54-202ENST00000314045 MAPK14Q16539 360 aa12.78□□□□□ -0.36
DDX54-202ENST00000314045 LIPKQ5VXJ0 399 aa12.78□□□□□ -0.36
DDX54-202ENST00000314045 PAPD4Q6PIY7 484 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms