RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 LDB3O75112 727 aa15.02□□□□□ -0.01
USP42-201ENST00000306177 OR7A10O76100 309 aa15.02□□□□□ -0.01
USP42-201ENST00000306177 FUT1P19526 365 aa15.02□□□□□ -0.01
USP42-201ENST00000306177 GABRB3P28472 473 aa15.02□□□□□ -0.01
USP42-201ENST00000306177 XCR1P46094 333 aa15.02□□□□□ -0.01
USP42-201ENST00000306177 EEF1A1P5Q5VTE0 462 aa15.02□□□□□ -0.01
USP42-201ENST00000306177 LRRC69Q6ZNQ3 347 aa15.02□□□□□ -0.01
USP42-201ENST00000306177 ANKRD13BQ86YJ7 626 aa15.02□□□□□ -0.01
USP42-201ENST00000306177 ZBTB8BQ8NAP8 495 aaPredicted RBP15.02□□□□□ -0.01
USP42-201ENST00000306177 OR5K2Q8NHB8 316 aa15.02□□□□□ -0.01
USP42-201ENST00000306177 NRG4Q8WWG1 115 aa15.02□□□□□ -0.01
USP42-201ENST00000306177 EGLN2Q96KS0 407 aa15.02□□□□□ -0.01
USP42-201ENST00000306177 SLC35A3Q9Y2D2 325 aa15.02□□□□□ -0.01
USP42-201ENST00000306177 TOGARAM1Q9Y4F4 1720 aa15.02□□□□□ -0.01
USP42-201ENST00000306177 F3P13726 295 aa15.02□□□□□ -0.01
USP42-201ENST00000306177 PRDX1Q06830 199 aaKnown RBP15.02□□□□□ -0.01
USP42-201ENST00000306177 OR14L1PQ8NHC6 308 aa15.02□□□□□ -0.01
USP42-201ENST00000306177 RDH8Q9NYR8 311 aa15.02□□□□□ -0.01
USP42-201ENST00000306177 TNRC6CQ9HCJ0 1690 aaKnown RBP15.02□□□□□ -0.01
USP42-201ENST00000306177 PSMB5P28074 263 aa15.01□□□□□ -0.01
USP42-201ENST00000306177 GNRHRP30968 328 aa15.01□□□□□ -0.01
USP42-201ENST00000306177 AHRP35869 848 aa15.01□□□□□ -0.01
USP42-201ENST00000306177 SGSHP51688 502 aa15.01□□□□□ -0.01
USP42-201ENST00000306177 LRRC26Q2I0M4 334 aa15.01□□□□□ -0.01
USP42-201ENST00000306177 PLAG1Q6DJT9 500 aa15.01□□□□□ -0.01
USP42-201ENST00000306177 DPY19L2P1Q6NXN4 242 aa15.01□□□□□ -0.01
USP42-201ENST00000306177 RABEPKQ7Z6M1 372 aa15.01□□□□□ -0.01
USP42-201ENST00000306177 HAVCR2Q8TDQ0 301 aa15.01□□□□□ -0.01
USP42-201ENST00000306177 ZBP1Q9H171 429 aa15.01□□□□□ -0.01
USP42-201ENST00000306177 GPN2Q9H9Y4 310 aaPredicted RBP15.01□□□□□ -0.01
USP42-201ENST00000306177 INTS6Q9UL03 887 aaKnown RBP15.01□□□□□ -0.01
USP42-201ENST00000306177 ABCG2Q9UNQ0 655 aa15.01□□□□□ -0.01
USP42-201ENST00000306177 ERVK-19Q9WJR5 959 aa15.01□□□□□ -0.01
USP42-201ENST00000306177 DDX60LQ5H9U9 1706 aaKnown RBP15.01□□□□□ -0.01
USP42-201ENST00000306177 FOXE1O00358 373 aaPredicted RBP15.01□□□□□ -0.01
USP42-201ENST00000306177 ZNF806P0C7X5 589 aa15.01□□□□□ -0.01
USP42-201ENST00000306177 CRABP1P29762 137 aa15.01□□□□□ -0.01
USP42-201ENST00000306177 RTN4RL1Q86UN2 441 aaPredicted RBP15.01□□□□□ -0.01
USP42-201ENST00000306177 LAS2Q8IYD9 372 aa15.01□□□□□ -0.01
USP42-201ENST00000306177 OR51L1Q8NGJ5 315 aa15.01□□□□□ -0.01
USP42-201ENST00000306177 OR5J2Q8NH18 312 aa15.01□□□□□ -0.01
USP42-201ENST00000306177 TMEM121BQ9BXQ6 578 aaPredicted RBP15.01□□□□□ -0.01
USP42-201ENST00000306177 TP63Q9H3D4 680 aaPredicted RBP15.01□□□□□ -0.01
USP42-201ENST00000306177 CUEDC1Q9NWM3 386 aaPredicted RBP15.01□□□□□ -0.01
USP42-201ENST00000306177 CCL26Q9Y258 94 aa15.01□□□□□ -0.01
USP42-201ENST00000306177 BLACEA4D250 179 aa15.01□□□□□ -0.01
USP42-201ENST00000306177 FTCDNL1E5RQL4 147 aa15.01□□□□□ -0.01
USP42-201ENST00000306177 ACOT7O00154 380 aa15.01□□□□□ -0.01
USP42-201ENST00000306177 MECP2P51608 486 aaKnown RBP15.01□□□□□ -0.01
USP42-201ENST00000306177 EMP2P54851 167 aa15.01□□□□□ -0.01
USP42-201ENST00000306177 MRPS21P82921 87 aaKnown RBP15.01□□□□□ -0.01
USP42-201ENST00000306177 SEMA3BQ13214 749 aa15.01□□□□□ -0.01
USP42-201ENST00000306177 EFR3AQ14156 821 aa15.01□□□□□ -0.01
USP42-201ENST00000306177 C3orf33Q6P1S2 294 aa15.01□□□□□ -0.01
USP42-201ENST00000306177 SYT14Q8NB59 555 aa15.01□□□□□ -0.01
USP42-201ENST00000306177 OR52R1Q8NGF1 315 aa15.01□□□□□ -0.01
USP42-201ENST00000306177 ATF4P18848 351 aaPredicted RBP15.01□□□□□ -0.01
USP42-201ENST00000306177 POU3F4P49335 361 aa15.01□□□□□ -0.01
USP42-201ENST00000306177 FCRLBQ6BAA4 426 aa15.01□□□□□ -0.01
USP42-201ENST00000306177 FAM217AQ8IXS0 508 aa15.01□□□□□ -0.01
USP42-201ENST00000306177 CYB561A3Q8NBI2 242 aa15.01□□□□□ -0.01
USP42-201ENST00000306177 KLHL15Q96M94 604 aa15.01□□□□□ -0.01
USP42-201ENST00000306177 TAS2R8Q9NYW2 309 aa15.01□□□□□ -0.01
USP42-201ENST00000306177 CSNK1G3Q9Y6M4 447 aa15.01□□□□□ -0.01
USP42-201ENST00000306177 ITGAMP11215 1152 aa15□□□□□ -0.01
USP42-201ENST00000306177 CD6P30203 668 aa15□□□□□ -0.01
USP42-201ENST00000306177 TMEM205Q6UW68 189 aa15□□□□□ -0.01
USP42-201ENST00000306177 GALNT11Q8NCW6 608 aa15□□□□□ -0.01
USP42-201ENST00000306177 EVA1AQ9H8M9 152 aa15□□□□□ -0.01
USP42-201ENST00000306177 ACSS1Q9NUB1 689 aaPredicted RBP15□□□□□ -0.01
USP42-201ENST00000306177 ADAM29Q9UKF5 820 aa15□□□□□ -0.01
USP42-201ENST00000306177 PHIPQ8WWQ0 1821 aa15□□□□□ -0.01
USP42-201ENST00000306177 H7C417 338 aa15□□□□□ -0.01
USP42-201ENST00000306177 OR2T1O43869 369 aa15□□□□□ -0.01
USP42-201ENST00000306177 PLATP00750 562 aa15□□□□□ -0.01
USP42-201ENST00000306177 HRGP04196 525 aa15□□□□□ -0.01
USP42-201ENST00000306177 ZNF35P13682 527 aa15□□□□□ -0.01
USP42-201ENST00000306177 RPE65Q16518 533 aa15□□□□□ -0.01
USP42-201ENST00000306177 LRRC37A5PQ49AS3 106 aa15□□□□□ -0.01
USP42-201ENST00000306177 PRAMEF8Q5VWM4 474 aa15□□□□□ -0.01
USP42-201ENST00000306177 PRAMEF7Q5VXH5 474 aa15□□□□□ -0.01
USP42-201ENST00000306177 METTL4Q8N3J2 472 aa15□□□□□ -0.01
USP42-201ENST00000306177 SYT4Q9H2B2 425 aa15□□□□□ -0.01
USP42-201ENST00000306177 NUP50Q9UKX7 468 aa15□□□□□ -0.01
USP42-201ENST00000306177 RNF215Q9Y6U7 377 aa15□□□□□ -0.01
USP42-201ENST00000306177 NPIPA5A0A0B4J1W7 369 aa15□□□□□ -0.01
USP42-201ENST00000306177 A6NIZ1 184 aa15□□□□□ -0.01
USP42-201ENST00000306177 NPIPA7E9PJI5 369 aa15□□□□□ -0.01
USP42-201ENST00000306177 SFTPBP07988 381 aa15□□□□□ -0.01
USP42-201ENST00000306177 NPIPA8P0DM63 369 aa15□□□□□ -0.01
USP42-201ENST00000306177 PXNP49023 591 aaPredicted RBP15□□□□□ -0.01
USP42-201ENST00000306177 RAP1BP61224 184 aa15□□□□□ -0.01
USP42-201ENST00000306177 RAP1AP62834 184 aa15□□□□□ -0.01
USP42-201ENST00000306177 PRR22Q8IZ63 422 aa15□□□□□ -0.01
USP42-201ENST00000306177 ACOT11Q8WXI4 607 aaPredicted RBP15□□□□□ -0.01
USP42-201ENST00000306177 INSM2Q96T92 566 aaPredicted RBP15□□□□□ -0.01
USP42-201ENST00000306177 C20orf27Q9GZN8 174 aa15□□□□□ -0.01
USP42-201ENST00000306177 FN3KQ9H479 309 aa15□□□□□ -0.01
USP42-201ENST00000306177 IER3IP1Q9Y5U9 82 aa15□□□□□ -0.01
USP42-201ENST00000306177 KIAA0895LQ68EN5 471 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms