RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 AOAHP28039 575 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 ZFP36L2P47974 494 aaKnown RBP10.24□□□□□ -0.77
LSM3-201ENST00000306024 AP1S2P56377 157 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 MLLT11Q13015 90 aaPredicted RBP10.24□□□□□ -0.77
LSM3-201ENST00000306024 MICAQ29983 383 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 CPTPQ5TA50 214 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 PAQR6Q6TCH4 344 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 TRILQ7L0X0 811 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 CLECL1Q8IZS7 167 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 SPAG16Q8N0X2 631 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 OR8D4Q8NGM9 314 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 ZNF671Q8TAW3 534 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 OR2M2Q96R28 347 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 OR4K3Q96R72 315 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 MARVELD1Q9BSK0 173 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 GABARAPL3Q9BY60 117 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 BIN3Q9NQY0 253 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 LYARQ9NX58 379 aaKnown RBP10.24□□□□□ -0.77
LSM3-201ENST00000306024 MGAT4CQ9UBM8 478 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 SCP2D1Q9UJQ7 156 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 FBXL2Q9UKC9 423 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 ZFR2Q9UPR6 939 aaKnown RBP10.24□□□□□ -0.77
LSM3-201ENST00000306024 BLKP51451 505 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 SLC16A1P53985 500 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 CLDN8P56748 225 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 SRSF11Q05519 484 aaKnown RBP10.24□□□□□ -0.77
LSM3-201ENST00000306024 CDKN3Q16667 212 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 FAM209BQ5JX69 171 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 DCST1Q5T197 706 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 LRRN1Q6UXK5 716 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 B3GLCTQ6Y288 498 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 Q6ZSR6 202 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 SYT13Q7L8C5 426 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 LILRA3Q8N6C8 439 aaPredicted RBP10.24□□□□□ -0.77
LSM3-201ENST00000306024 ZNF454Q8N9F8 522 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 OR52E4Q8NGH9 312 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 GPR137Q96N19 417 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 MIXL1Q9H2W2 232 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 C6orf106Q9H6K1 298 aaPredicted RBP10.24□□□□□ -0.77
LSM3-201ENST00000306024 DLGAP4Q9Y2H0 992 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 SYNDIG1LA6NDD5 238 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 CD8B2A6NJW9 211 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 F8W036 122 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 PI15O43692 258 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 OR5F1O95221 314 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 RAB36O95755 333 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 ECDO95905 644 aaPredicted RBP10.24□□□□□ -0.77
LSM3-201ENST00000306024 TFP02787 698 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 HLA-DPB1P04440 258 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 THEGLP0DJG4 465 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 CD8BP10966 210 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 IL1RNP18510 177 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 PDHA2P29803 388 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 PRLHRP49683 370 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 BTG1P62324 171 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 C1orf61Q13536 156 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 MEDAGQ5VYS4 303 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 ELP2Q6IA86 826 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 FRMPD2BQ6IN97 320 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 CDC73Q6P1J9 531 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 LRFN4Q6PJG9 635 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 GPAT4Q86UL3 456 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 OXR1Q8N573 874 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 TBC1D19Q8N5T2 526 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 GPR156Q8NFN8 814 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 OR10G6Q8NH81 332 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 CACYBPQ9HB71 228 aaKnown RBP10.24□□□□□ -0.77
LSM3-201ENST00000306024 SLC22A14Q9Y267 594 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 MAP4K5Q9Y4K4 846 aa10.24□□□□□ -0.77
LSM3-201ENST00000306024 C2orf16Q68DN1 1984 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 C2orf92A0A1B0GVN3 265 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 POM121BA6NF01 834 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 PRAMEF26H0Y7S4 382 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 H0Y8X5 98 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 GAPDHSO14556 408 aaPredicted RBP10.23□□□□□ -0.77
LSM3-201ENST00000306024 PLRG1O43660 514 aaKnown RBP10.23□□□□□ -0.77
LSM3-201ENST00000306024 SLC19A2O60779 497 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 GATBO75879 557 aaKnown RBP10.23□□□□□ -0.77
LSM3-201ENST00000306024 RGS11O94810 467 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 SIX6O95475 246 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 TGM6O95932 706 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 TNFP01375 233 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 NUDT7P0C024 238 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 GMFBP60983 142 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 RPS25P62851 125 aaKnown RBP10.23□□□□□ -0.77
LSM3-201ENST00000306024 ZNF91Q05481 1191 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 DPTQ07507 201 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 CCINQ13939 588 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 GLYR1Q49A26 553 aaPredicted RBP10.23□□□□□ -0.77
LSM3-201ENST00000306024 PRAMEF14Q5SWL7 426 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 GCNT6Q5T4J0 391 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 OR2G6Q5TZ20 316 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 TMPRSS11BQ86T26 416 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 SERPINA11Q86U17 422 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 PROKR2Q8NFJ6 384 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 HSPA12BQ96MM6 686 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 DDOQ99489 341 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 DUSP26Q9BV47 211 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 C1QTNF2Q9BXJ5 285 aa10.23□□□□□ -0.77
LSM3-201ENST00000306024 KLHL31Q9H511 634 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms