RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 ARMC10Q8N2F6 343 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 CCDC107Q8WV48 283 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 HS6ST2Q96MM7 605 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 DGAT2Q96PD7 388 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 TRIM2Q9C040 744 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 ARL6Q9H0F7 186 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 SRA1Q9HD15 236 aaKnown RBP12.5□□□□□ -0.41
DDX54-201ENST00000306014 CD93Q9NPY3 652 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 LAMP5Q9UJQ1 280 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 DIMT1Q9UNQ2 313 aaKnown RBP12.5□□□□□ -0.41
DDX54-201ENST00000306014 YARS2Q9Y2Z4 477 aaKnown RBP12.5□□□□□ -0.41
DDX54-201ENST00000306014 ANKRD34BA5PLL1 514 aa12.49□□□□□ -0.41
DDX54-201ENST00000306014 WASHC1A8K0Z3 465 aa12.49□□□□□ -0.41
DDX54-201ENST00000306014 SMLR1H3BR10 107 aa12.49□□□□□ -0.41
DDX54-201ENST00000306014 POLR1CO15160 346 aaPredicted RBP12.49□□□□□ -0.41
DDX54-201ENST00000306014 RBBP9O75884 186 aa12.49□□□□□ -0.41
DDX54-201ENST00000306014 S100A9P06702 114 aaKnown RBP12.49□□□□□ -0.41
DDX54-201ENST00000306014 CTSAP10619 480 aa12.49□□□□□ -0.41
DDX54-201ENST00000306014 PSPHP78330 225 aa12.49□□□□□ -0.41
DDX54-201ENST00000306014 ALG11Q2TAA5 492 aa12.49□□□□□ -0.41
DDX54-201ENST00000306014 PGGHGQ32M88 737 aa12.49□□□□□ -0.41
DDX54-201ENST00000306014 ENTPD8Q5MY95 495 aa12.49□□□□□ -0.41
DDX54-201ENST00000306014 GPR135Q8IZ08 494 aa12.49□□□□□ -0.41
DDX54-201ENST00000306014 MFSD4AQ8N468 514 aa12.49□□□□□ -0.41
DDX54-201ENST00000306014 HCAR2Q8TDS4 363 aa12.49□□□□□ -0.41
DDX54-201ENST00000306014 NEURL3Q96EH8 262 aa12.49□□□□□ -0.41
DDX54-201ENST00000306014 PITX2Q99697 317 aa12.49□□□□□ -0.41
DDX54-201ENST00000306014 OR52D1Q9H346 318 aa12.49□□□□□ -0.41
DDX54-201ENST00000306014 CENPMQ9NSP4 180 aa12.49□□□□□ -0.41
DDX54-201ENST00000306014 BABAM2Q9NXR7 383 aa12.49□□□□□ -0.41
DDX54-201ENST00000306014 FBXL21Q9UKT6 434 aa12.49□□□□□ -0.41
DDX54-201ENST00000306014 KANTRA0A1W2PQU2 76 aa12.49□□□□□ -0.41
DDX54-201ENST00000306014 C5orf51A6NDU8 294 aa12.49□□□□□ -0.41
DDX54-201ENST00000306014 PRKRAO75569 313 aaKnown RBP12.49□□□□□ -0.41
DDX54-201ENST00000306014 VAMP1P23763 118 aa12.49□□□□□ -0.41
DDX54-201ENST00000306014 SSTR2P30874 369 aa12.49□□□□□ -0.41
DDX54-201ENST00000306014 KCNJ5P48544 419 aa12.49□□□□□ -0.41
DDX54-201ENST00000306014 KIAA0040Q15053 153 aa12.49□□□□□ -0.41
DDX54-201ENST00000306014 ACSM3Q53FZ2 586 aa12.49□□□□□ -0.41
DDX54-201ENST00000306014 C3orf38Q5JPI3 329 aa12.49□□□□□ -0.41
DDX54-201ENST00000306014 SIMC1Q8NDZ2 872 aa12.49□□□□□ -0.41
DDX54-201ENST00000306014 PSD2Q9BQI7 771 aa12.49□□□□□ -0.41
DDX54-201ENST00000306014 CDCA4Q9BXL8 241 aa12.49□□□□□ -0.41
DDX54-201ENST00000306014 COPZ2Q9P299 210 aa12.49□□□□□ -0.41
DDX54-201ENST00000306014 FARSAQ9Y285 508 aaKnown RBP12.49□□□□□ -0.41
DDX54-201ENST00000306014 ASB4Q9Y574 426 aa12.49□□□□□ -0.41
DDX54-201ENST00000306014 A0A1W2PQU0 124 aa12.49□□□□□ -0.41
DDX54-201ENST00000306014 OR2AT4A6NND4 320 aa12.49□□□□□ -0.41
DDX54-201ENST00000306014 PRSS23O95084 383 aa12.49□□□□□ -0.41
DDX54-201ENST00000306014 DBIP07108 87 aaKnown RBP12.49□□□□□ -0.41
DDX54-201ENST00000306014 PCMT1P22061 227 aa12.49□□□□□ -0.41
DDX54-201ENST00000306014 MMP11P24347 488 aa12.49□□□□□ -0.41
DDX54-201ENST00000306014 IL12BP29460 328 aa12.49□□□□□ -0.41
DDX54-201ENST00000306014 LRRC37A5PQ49AS3 106 aa12.49□□□□□ -0.41
DDX54-201ENST00000306014 ALG10BQ5I7T1 473 aa12.49□□□□□ -0.41
DDX54-201ENST00000306014 WASH2PQ6VEQ5 465 aa12.49□□□□□ -0.41
DDX54-201ENST00000306014 SERPINA12Q8IW75 414 aa12.49□□□□□ -0.41
DDX54-201ENST00000306014 IFT46Q9NQC8 304 aa12.49□□□□□ -0.41
DDX54-201ENST00000306014 PNO1Q9NRX1 252 aaKnown RBP12.49□□□□□ -0.41
DDX54-201ENST00000306014 NOP16Q9Y3C1 178 aaKnown RBP12.49□□□□□ -0.41
DDX54-201ENST00000306014 TRBV5-4A0A0C4DH59 114 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 H3BNC9 293 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 M0R082 166 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 KRT33AO76009 404 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 CSTAP01040 98 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 CXCR1P25024 350 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 MAPK3P27361 379 aaPredicted RBP12.48□□□□□ -0.41
DDX54-201ENST00000306014 MRPL19P49406 292 aaKnown RBP12.48□□□□□ -0.41
DDX54-201ENST00000306014 PUDPQ08623 228 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 TSPAN31Q12999 210 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 GAS6Q14393 721 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 POU4F3Q15319 338 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 ZCCHC12Q6PEW1 402 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 CD300LGQ6UXG3 332 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 ATCAYQ86WG3 371 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 CDS1Q92903 461 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 OR7D2Q96RA2 312 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 CNN2Q99439 309 aaKnown RBP12.48□□□□□ -0.41
DDX54-201ENST00000306014 MED20Q9H944 212 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 ACSS1Q9NUB1 689 aaPredicted RBP12.48□□□□□ -0.41
DDX54-201ENST00000306014 TMEM184CQ9NVA4 438 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 FAM171A2A8MVW0 826 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 CREBL2O60519 120 aaPredicted RBP12.48□□□□□ -0.41
DDX54-201ENST00000306014 RP2O75695 350 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 OR7A10O76100 309 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 HIST1H1TP22492 207 aaPredicted RBP12.48□□□□□ -0.41
DDX54-201ENST00000306014 VSX2P58304 361 aaPredicted RBP12.48□□□□□ -0.41
DDX54-201ENST00000306014 DEFB103AP81534 67 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 SNTA1Q13424 505 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 SLC22A10Q63ZE4 541 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 FAM83HQ6ZRV2 1179 aaPredicted RBP12.48□□□□□ -0.41
DDX54-201ENST00000306014 COMMD7Q86VX2 200 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 PCNPQ8WW12 178 aaKnown RBP12.48□□□□□ -0.41
DDX54-201ENST00000306014 TMEM239Q8WW34 195 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 LINC01599Q8WXQ3 324 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 EID2BQ96D98 161 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 OR2M4Q96R27 311 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 MKRN2Q9H000 416 aaKnown RBP12.48□□□□□ -0.41
DDX54-201ENST00000306014 SLC6A15Q9H2J7 730 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 MVB12BQ9H7P6 319 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms