RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 HMGN2P46Q86SG4 172 aa13.25□□□□□ -0.29
RAB40A-201ENST00000304236 AKAP14Q86UN6 197 aa13.25□□□□□ -0.29
RAB40A-201ENST00000304236 UFD1Q92890 307 aa13.25□□□□□ -0.29
RAB40A-201ENST00000304236 SLC25A46Q96AG3 418 aa13.25□□□□□ -0.29
RAB40A-201ENST00000304236 SLC35A4Q96G79 324 aa13.25□□□□□ -0.29
RAB40A-201ENST00000304236 SERINC2Q96SA4 455 aa13.25□□□□□ -0.29
RAB40A-201ENST00000304236 SDHCQ99643 169 aaPredicted RBP13.25□□□□□ -0.29
RAB40A-201ENST00000304236 BARHL1Q9BZE3 327 aa13.25□□□□□ -0.29
RAB40A-201ENST00000304236 QRSL1Q9H0R6 528 aaKnown RBP13.25□□□□□ -0.29
RAB40A-201ENST00000304236 TXNL4BQ9NX01 149 aaKnown RBP13.25□□□□□ -0.29
RAB40A-201ENST00000304236 PCOLCE2Q9UKZ9 415 aa13.25□□□□□ -0.29
RAB40A-201ENST00000304236 CMAHPQ9Y471 501 aa13.25□□□□□ -0.29
RAB40A-201ENST00000304236 SPIN1Q9Y657 262 aaPredicted RBP13.25□□□□□ -0.29
RAB40A-201ENST00000304236 FRYLO94915 3013 aa13.24□□□□□ -0.29
RAB40A-201ENST00000304236 ATG2BQ96BY7 2078 aa13.24□□□□□ -0.29
RAB40A-201ENST00000304236 CDRT1O95170 752 aa13.24□□□□□ -0.29
RAB40A-201ENST00000304236 ZNF888P0CJ79 500 aaPredicted RBP13.24□□□□□ -0.29
RAB40A-201ENST00000304236 ZNF10P21506 573 aaPredicted RBP13.24□□□□□ -0.29
RAB40A-201ENST00000304236 MAT2AP31153 395 aaKnown RBP13.24□□□□□ -0.29
RAB40A-201ENST00000304236 PSPHP78330 225 aa13.24□□□□□ -0.29
RAB40A-201ENST00000304236 SF3A2Q15428 464 aaKnown RBP13.24□□□□□ -0.29
RAB40A-201ENST00000304236 MFSD12Q6NUT3 480 aa13.24□□□□□ -0.29
RAB40A-201ENST00000304236 HSDL2Q6YN16 418 aa13.24□□□□□ -0.29
RAB40A-201ENST00000304236 C11orf74Q86VG3 221 aa13.24□□□□□ -0.29
RAB40A-201ENST00000304236 PEX5LQ8IYB4 626 aa13.24□□□□□ -0.29
RAB40A-201ENST00000304236 OR4K14Q8NGD5 310 aa13.24□□□□□ -0.29
RAB40A-201ENST00000304236 SLC9A6Q92581 669 aa13.24□□□□□ -0.29
RAB40A-201ENST00000304236 KAT2AQ92830 837 aa13.24□□□□□ -0.29
RAB40A-201ENST00000304236 KCTD7Q96MP8 289 aa13.24□□□□□ -0.29
RAB40A-201ENST00000304236 MCHR1Q99705 422 aa13.24□□□□□ -0.29
RAB40A-201ENST00000304236 SRMSQ9H3Y6 488 aa13.24□□□□□ -0.29
RAB40A-201ENST00000304236 NLGN3Q9NZ94 848 aa13.24□□□□□ -0.29
RAB40A-201ENST00000304236 NPAP1Q9NZP6 1156 aa13.24□□□□□ -0.29
RAB40A-201ENST00000304236 PTGFRNQ9P2B2 879 aa13.24□□□□□ -0.29
RAB40A-201ENST00000304236 TBC1D29Q9UFV1 150 aa13.24□□□□□ -0.29
RAB40A-201ENST00000304236 MMP17Q9ULZ9 603 aa13.24□□□□□ -0.29
RAB40A-201ENST00000304236 GSTK1Q9Y2Q3 226 aa13.24□□□□□ -0.29
RAB40A-201ENST00000304236 GPR55Q9Y2T6 319 aaPredicted RBP13.24□□□□□ -0.29
RAB40A-201ENST00000304236 A0A1W2PS29 197 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 WWP2O00308 870 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 HMGN1P05114 100 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 SMIM10L1P0DMW3 83 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 SPNP16150 400 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 MPLP40238 635 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 AVPR1BP47901 424 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 SLC9A3P48764 834 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 PDX1P52945 283 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 TPTEP56180 551 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 LSM11P83369 360 aaKnown RBP eCLIP13.23□□□□□ -0.29
RAB40A-201ENST00000304236 SELENBP1Q13228 472 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 NFATC4Q14934 902 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 ARHGAP11BQ3KRB8 267 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 EIPR1Q53HC9 387 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 FRRS1Q6ZNA5 592 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 MBOAT2Q6ZWT7 520 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 OR8H2Q8N162 312 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 KCT2Q8NC54 265 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 OR8D4Q8NGM9 314 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 ASB15Q8WXK1 588 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 TM4SF19Q96DZ7 209 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 TRMT61AQ96FX7 289 aaKnown RBP13.23□□□□□ -0.29
RAB40A-201ENST00000304236 SLC41A3Q96GZ6 507 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 SMIM10Q96HG1 83 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 FAM46AQ96IP4 442 aaKnown RBP13.23□□□□□ -0.29
RAB40A-201ENST00000304236 DUSP15Q9H1R2 295 aaPredicted RBP13.23□□□□□ -0.29
RAB40A-201ENST00000304236 SYNPO2LQ9H987 977 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 SACM1LQ9NTJ5 587 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 IL20Q9NYY1 176 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 ZNF443Q9Y2A4 671 aaPredicted RBP13.23□□□□□ -0.29
RAB40A-201ENST00000304236 NCKAP1Q9Y2A7 1128 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 CAB39Q9Y376 341 aaPredicted RBP13.23□□□□□ -0.29
RAB40A-201ENST00000304236 GRIP1Q9Y3R0 1128 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 CHST2Q9Y4C5 530 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 PCDHGB2Q9Y5G2 931 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 TNFSF14O43557 240 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 B3GALT2O43825 422 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 LTB4RQ15722 352 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 PLA2G2CQ5R387 149 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 FBXO42Q6P3S6 717 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 ENPP7Q6UWV6 458 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 NCCRP1Q6ZVX7 275 aaPredicted RBP13.23□□□□□ -0.29
RAB40A-201ENST00000304236 CACTIN-AS1Q8N1I8 211 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 OR7G2Q8NG99 324 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 OR1E3Q8WZA6 343 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 AP3S1Q92572 193 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 ZG16BQ96DA0 208 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 WDR92Q96MX6 357 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 COQ7Q99807 217 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 KCMF1Q9P0J7 381 aa13.23□□□□□ -0.29
RAB40A-201ENST00000304236 RALGAPA1Q6GYQ0 2036 aa13.22□□□□□ -0.29
RAB40A-201ENST00000304236 BTN3A3O00478 584 aa13.22□□□□□ -0.29
RAB40A-201ENST00000304236 FRS3O43559 492 aa13.22□□□□□ -0.29
RAB40A-201ENST00000304236 DYRK3O43781 588 aa13.22□□□□□ -0.29
RAB40A-201ENST00000304236 THBS1P07996 1170 aa13.22□□□□□ -0.29
RAB40A-201ENST00000304236 GAAP10253 952 aa13.22□□□□□ -0.29
RAB40A-201ENST00000304236 GABRA5P31644 462 aa13.22□□□□□ -0.29
RAB40A-201ENST00000304236 TRHRP34981 398 aaPredicted RBP13.22□□□□□ -0.29
RAB40A-201ENST00000304236 CDH11P55287 796 aa13.22□□□□□ -0.29
RAB40A-201ENST00000304236 DSG2Q14126 1118 aa13.22□□□□□ -0.29
RAB40A-201ENST00000304236 C6orf132Q5T0Z8 1188 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms