RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 GPR32P1Q8NGA4 272 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 SLC22A8Q8TCC7 542 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 SPPL2AQ8TCT8 520 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 GRHL3Q8TE85 626 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 PAQR8Q8TEZ7 354 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 TAMM41Q96BW9 452 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 ZNF524Q96C55 264 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 COL21A1Q96P44 957 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 AGAP4Q96P64 663 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 KCTD14Q9BQ13 255 aaPredicted RBP8.7□□□□□ -1.02
RFX3-201ENST00000302303 RNF32Q9H0A6 362 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 GORASP2Q9H8Y8 452 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 MTHFD2LQ9H903 347 aaPredicted RBP8.7□□□□□ -1.02
RFX3-201ENST00000302303 POLE3Q9NRF9 147 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 DEPPQ9NTK1 212 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 CNOT11Q9UKZ1 510 aaKnown RBP8.7□□□□□ -1.02
RFX3-201ENST00000302303 POMPQ9Y244 141 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 WDR45Q9Y484 360 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 OR10H1Q9Y4A9 318 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 PCDHGA9Q9Y5G4 932 aaKnown RBP8.7□□□□□ -1.02
RFX3-201ENST00000302303 TCRBV5S2A0A599 114 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 ERICH4A6NGS2 130 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 M0QX08 132 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 CXCR6O00574 342 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 OIP5O43482 229 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 ADAM11O75078 769 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 UTS2O95399 124 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 OXSR1O95747 527 aaPredicted RBP8.7□□□□□ -1.02
RFX3-201ENST00000302303 ITGB2P05107 769 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 NGFRP08138 427 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 ETS2P15036 469 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 CD247P20963 164 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 ME2P23368 584 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 AQP1P29972 269 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 DCTP40126 519 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 CASP3P42574 277 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 ANXA11P50995 505 aaKnown RBP8.7□□□□□ -1.02
RFX3-201ENST00000302303 CRISP3P54108 245 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 ATP12AP54707 1039 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 NRG3P56975 720 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 PSPHP78330 225 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 INPP5JQ15735 1006 aaPredicted RBP8.7□□□□□ -1.02
RFX3-201ENST00000302303 GPR68Q15743 365 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 CD226Q15762 336 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 DUSP7Q16829 419 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 ATAD3BQ5T9A4 648 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 ABHD17BQ5VST6 288 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 GLYATQ6IB77 296 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 ERICH5Q6P6B1 374 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 TMEM81Q6P7N7 255 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 OPN5Q6U736 354 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 PCSK4Q6UW60 755 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 IGFL3Q6UXB1 125 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 TSEN54Q7Z6J9 526 aaKnown RBP8.7□□□□□ -1.02
RFX3-201ENST00000302303 VRK2Q86Y07 508 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 FAM86B1Q8N7N1 296 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 OR52E4Q8NGH9 312 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 OR5M3Q8NGP4 307 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 WDR60Q8WVS4 1066 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 FRMD6Q96NE9 622 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 G6PC3Q9BUM1 346 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 HES7Q9BYE0 225 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 MMADHCQ9H3L0 296 aaPredicted RBP8.7□□□□□ -1.02
RFX3-201ENST00000302303 SUCOQ9UBS9 1254 aaKnown RBP8.7□□□□□ -1.02
RFX3-201ENST00000302303 ZNF451Q9Y4E5 1061 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 TNRC6AQ8NDV7 1962 aaKnown RBP8.69□□□□□ -1.02
RFX3-201ENST00000302303 A0A0G2JMM0 328 aa8.69□□□□□ -1.02
RFX3-201ENST00000302303 A0A1W2PPB8 328 aa8.69□□□□□ -1.02
RFX3-201ENST00000302303 A0A1W2PRS3 328 aa8.69□□□□□ -1.02
RFX3-201ENST00000302303 KIR3DP1A8MWS1 328 aa8.69□□□□□ -1.02
RFX3-201ENST00000302303 ALG1L2C9J202 215 aa8.69□□□□□ -1.02
RFX3-201ENST00000302303 CDK2AP1O14519 115 aa8.69□□□□□ -1.02
RFX3-201ENST00000302303 ARPC2O15144 300 aa8.69□□□□□ -1.02
RFX3-201ENST00000302303 ATP6V1B2P21281 511 aa8.69□□□□□ -1.02
RFX3-201ENST00000302303 LCN1P31025 176 aa8.69□□□□□ -1.02
RFX3-201ENST00000302303 ADH7P40394 386 aa8.69□□□□□ -1.02
RFX3-201ENST00000302303 RFX3P48380 749 aa8.69□□□□□ -1.02
RFX3-201ENST00000302303 RNF144AP50876 292 aaPredicted RBP8.69□□□□□ -1.02
RFX3-201ENST00000302303 POLE2P56282 527 aa8.69□□□□□ -1.02
RFX3-201ENST00000302303 EEF1A1P68104 462 aaKnown RBP8.69□□□□□ -1.02
RFX3-201ENST00000302303 IQCCQ4KMZ1 466 aa8.69□□□□□ -1.02
RFX3-201ENST00000302303 FLYWCH1Q4VC44 716 aa8.69□□□□□ -1.02
RFX3-201ENST00000302303 PDZK1Q5T2W1 519 aa8.69□□□□□ -1.02
RFX3-201ENST00000302303 LCN8Q6JVE9 175 aa8.69□□□□□ -1.02
RFX3-201ENST00000302303 MARCH3Q86UD3 253 aa8.69□□□□□ -1.02
RFX3-201ENST00000302303 CLIP4Q8N3C7 705 aa8.69□□□□□ -1.02
RFX3-201ENST00000302303 TMEM156Q8N614 296 aa8.69□□□□□ -1.02
RFX3-201ENST00000302303 EXD3Q8N9H8 876 aa8.69□□□□□ -1.02
RFX3-201ENST00000302303 OR4D11Q8NGI4 311 aa8.69□□□□□ -1.02
RFX3-201ENST00000302303 OR10Q1Q8NGQ4 319 aa8.69□□□□□ -1.02
RFX3-201ENST00000302303 BBS10Q8TAM1 723 aa8.69□□□□□ -1.02
RFX3-201ENST00000302303 ASB15Q8WXK1 588 aa8.69□□□□□ -1.02
RFX3-201ENST00000302303 PMM1Q92871 262 aa8.69□□□□□ -1.02
RFX3-201ENST00000302303 ASB9Q96DX5 294 aa8.69□□□□□ -1.02
RFX3-201ENST00000302303 ABHD17AQ96GS6 310 aa8.69□□□□□ -1.02
RFX3-201ENST00000302303 GALNT9Q9HCQ5 603 aa8.69□□□□□ -1.02
RFX3-201ENST00000302303 UBQLN4Q9NRR5 601 aa8.69□□□□□ -1.02
RFX3-201ENST00000302303 DCAF13Q9NV06 445 aaKnown RBP8.69□□□□□ -1.02
RFX3-201ENST00000302303 RLIMQ9NVW2 624 aa8.69□□□□□ -1.02
RFX3-201ENST00000302303 ACTR3BQ9P1U1 418 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms