RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 ZMYND11Q15326 602 aa13.19□□□□□ -0.3
SDC2-201ENST00000302190 ZNF613Q6PF04 617 aa13.19□□□□□ -0.3
SDC2-201ENST00000302190 PROKR2Q8NFJ6 384 aa13.19□□□□□ -0.3
SDC2-201ENST00000302190 OR56A1Q8NGH5 318 aa13.19□□□□□ -0.3
SDC2-201ENST00000302190 ZNF563Q8TA94 476 aa13.19□□□□□ -0.3
SDC2-201ENST00000302190 ZG16BQ96DA0 208 aa13.19□□□□□ -0.3
SDC2-201ENST00000302190 ERMAPQ96PL5 475 aaPredicted RBP13.19□□□□□ -0.3
SDC2-201ENST00000302190 CCDC32Q9BV29 185 aa13.19□□□□□ -0.3
SDC2-201ENST00000302190 CALML5Q9NZT1 146 aa13.19□□□□□ -0.3
SDC2-201ENST00000302190 ZMAT5Q9UDW3 170 aaKnown RBP13.19□□□□□ -0.3
SDC2-201ENST00000302190 SCN2AQ99250 2005 aa13.19□□□□□ -0.3
SDC2-201ENST00000302190 LOC100509620A0A075B734 347 aa13.19□□□□□ -0.3
SDC2-201ENST00000302190 KCNE1BA0A087WTH5 132 aa13.19□□□□□ -0.3
SDC2-201ENST00000302190 URADA6NGE7 173 aa13.19□□□□□ -0.3
SDC2-201ENST00000302190 DUXAA6NLW8 204 aa13.19□□□□□ -0.3
SDC2-201ENST00000302190 KAT7O95251 611 aa13.19□□□□□ -0.3
SDC2-201ENST00000302190 NDUFV2P19404 249 aa13.19□□□□□ -0.3
SDC2-201ENST00000302190 ACVR2AP27037 513 aa13.19□□□□□ -0.3
SDC2-201ENST00000302190 CD6P30203 668 aa13.19□□□□□ -0.3
SDC2-201ENST00000302190 OR12D2P58182 307 aa13.19□□□□□ -0.3
SDC2-201ENST00000302190 FGFBP1Q14512 234 aa13.19□□□□□ -0.3
SDC2-201ENST00000302190 NDUFA9Q16795 377 aa13.19□□□□□ -0.3
SDC2-201ENST00000302190 SFTPA1Q8IWL2 248 aa13.19□□□□□ -0.3
SDC2-201ENST00000302190 VWA5B2Q8N398 1253 aa13.19□□□□□ -0.3
SDC2-201ENST00000302190 OR52I1Q8NGK6 324 aa13.19□□□□□ -0.3
SDC2-201ENST00000302190 GNPDA2Q8TDQ7 276 aa13.19□□□□□ -0.3
SDC2-201ENST00000302190 GINS4Q9BRT9 223 aa13.19□□□□□ -0.3
SDC2-201ENST00000302190 SLITRK2Q9H156 845 aa13.19□□□□□ -0.3
SDC2-201ENST00000302190 PPIL3Q9H2H8 161 aaKnown RBP13.19□□□□□ -0.3
SDC2-201ENST00000302190 ATPIF1Q9UII2 106 aa13.19□□□□□ -0.3
SDC2-201ENST00000302190 RWDD3Q9Y3V2 267 aa13.19□□□□□ -0.3
SDC2-201ENST00000302190 KLK4Q9Y5K2 254 aa13.19□□□□□ -0.3
SDC2-201ENST00000302190 PRODHO43272 600 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 FCMRO60667 390 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 HNRNPA1L2Q32P51 320 aaKnown RBP13.18□□□□□ -0.3
SDC2-201ENST00000302190 TP53I3Q53FA7 332 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 UNC5DQ6UXZ4 953 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 NOXA1Q86UR1 476 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 NKAIN4Q8IVV8 208 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 PIAS4Q8N2W9 510 aaPredicted RBP13.18□□□□□ -0.3
SDC2-201ENST00000302190 WFIKKN2Q8TEU8 576 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 SETD7Q8WTS6 366 aaKnown RBP13.18□□□□□ -0.3
SDC2-201ENST00000302190 ZFPM2Q8WW38 1151 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 OPALINQ96PE5 141 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 GSDMCQ9BYG8 508 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 SLA2Q9H6Q3 261 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 PPIEQ9UNP9 301 aaKnown RBP13.18□□□□□ -0.3
SDC2-201ENST00000302190 MED31Q9Y3C7 131 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 DMDP11532 3685 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 FAM25EA8MYX2 175 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 HRO43593 1189 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 RAD1O60671 282 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 SCG5P05408 212 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 ENPP1P22413 925 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 SSTR2P30874 369 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 TGFBR2P37173 567 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 GXYLT1Q4G148 440 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 FAM205BPQ63HN1 556 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 CHMP1BQ7LBR1 199 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 DEFB119Q8N690 84 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 ZNF655Q8N720 491 aaPredicted RBP13.18□□□□□ -0.3
SDC2-201ENST00000302190 SLC16A11Q8NCK7 471 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 OR4K14Q8NGD5 310 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 DEDD2Q8WXF8 326 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 INSM2Q96T92 566 aaPredicted RBP13.18□□□□□ -0.3
SDC2-201ENST00000302190 RAD9AQ99638 391 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 DIABLOQ9NR28 239 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 CNOT2Q9NZN8 540 aaKnown RBP13.18□□□□□ -0.3
SDC2-201ENST00000302190 KLHL42Q9P2K6 505 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 AK6Q9Y3D8 172 aaKnown RBP13.18□□□□□ -0.3
SDC2-201ENST00000302190 STON1Q9Y6Q2 735 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 PTPRSQ13332 1948 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 EMC8O43402 210 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 SCO1O75880 301 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 GLULP15104 373 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 M6PRP20645 277 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 CDK3Q00526 305 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 CRYZQ08257 329 aaKnown RBP13.18□□□□□ -0.3
SDC2-201ENST00000302190 RPA4Q13156 261 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 ZNF267Q14586 743 aaPredicted RBP13.18□□□□□ -0.3
SDC2-201ENST00000302190 PUM1Q14671 1186 aaKnown RBP eCLIP13.18□□□□□ -0.3
SDC2-201ENST00000302190 EXOSC7Q15024 291 aaKnown RBP13.18□□□□□ -0.3
SDC2-201ENST00000302190 NTRK2Q16620 822 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 SYT14P1Q58G82 188 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 PRRT3Q5FWE3 981 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 Q6ZNB5 142 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 ZNF438Q7Z4V0 828 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 SIMC1Q8NDZ2 872 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 ZNF566Q969W8 418 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 RFT1Q96AA3 541 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 SLC41A3Q96GZ6 507 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 ZNF582Q96NG8 517 aaPredicted RBP13.18□□□□□ -0.3
SDC2-201ENST00000302190 FUZQ9BT04 418 aa13.18□□□□□ -0.3
SDC2-201ENST00000302190 PEPDP12955 493 aa13.17□□□□□ -0.3
SDC2-201ENST00000302190 PSMB10P40306 273 aa13.17□□□□□ -0.3
SDC2-201ENST00000302190 GPLD1P80108 840 aa13.17□□□□□ -0.3
SDC2-201ENST00000302190 ENTPD8Q5MY95 495 aa13.17□□□□□ -0.3
SDC2-201ENST00000302190 FAM27D1Q5T7N8 215 aa13.17□□□□□ -0.3
SDC2-201ENST00000302190 PRICKLE2Q7Z3G6 844 aa13.17□□□□□ -0.3
SDC2-201ENST00000302190 C12orf40Q86WS4 652 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms