RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 ARFIP1P53367 373 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 DUSP8Q13202 625 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 ARHGAP11BQ3KRB8 267 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 SYT14P1Q58G82 188 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 WDR88Q6ZMY6 472 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 SAMD14Q8IZD0 417 aaPredicted RBP13.54□□□□□ -0.24
SMG8-201ENST00000300917 B4GALNT2Q8NHY0 566 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 CNOT9Q92600 299 aaKnown RBP13.54□□□□□ -0.24
SMG8-201ENST00000300917 BORCS5Q969J3 196 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 DNAJA3Q96EY1 480 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 C20orf141Q9NUB4 165 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 DHCR7Q9UBM7 475 aaKnown RBP13.54□□□□□ -0.24
SMG8-201ENST00000300917 FOXS1O43638 330 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 ASNA1O43681 348 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 CBX7O95931 251 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 HTR2AP28223 471 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 OR1D5P58170 312 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 FLYWCH1Q4VC44 716 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 FHL5Q5TD97 284 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 C12orf73Q69YU5 71 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 HEPHL1Q6MZM0 1159 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 SLC46A3Q7Z3Q1 461 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 MCFD2Q8NI22 146 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 DYNC2LI1Q8TCX1 351 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 RIT1Q92963 219 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 SAMD8Q96LT4 415 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 LMF1Q96S06 567 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 FKBP14Q9NWM8 211 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 ZC3H12DA2A288 527 aaKnown RBP13.54□□□□□ -0.24
SMG8-201ENST00000300917 AGAP5A6NIR3 686 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 ARHGAP33O14559 1287 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 AQP9O43315 295 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 BMP8BP34820 402 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 POU6F2P78424 691 aaPredicted RBP13.54□□□□□ -0.24
SMG8-201ENST00000300917 CSTF1Q05048 431 aaKnown RBP13.54□□□□□ -0.24
SMG8-201ENST00000300917 MXD1Q05195 221 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 DMWDQ09019 674 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 MGAT2Q10469 447 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 INAQ16352 499 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 LRIT3Q3SXY7 679 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 MINDY4Q4G0A6 757 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 LIPKQ5VXJ0 399 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 SLC27A4Q6P1M0 643 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 GHDCQ8N2G8 530 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 CADM2Q8N3J6 435 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 BBS1Q8NFJ9 593 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 ENKD1Q9H0I2 346 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 TRIM45Q9H8W5 580 aaPredicted RBP13.54□□□□□ -0.24
SMG8-201ENST00000300917 MED20Q9H944 212 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 POLE4Q9NR33 117 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 TOR4AQ9NXH8 423 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 GALNT8Q9NY28 637 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 NLGN3Q9NZ94 848 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 ERVK-19Q9WJR5 959 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 ERGIC3Q9Y282 383 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 ALPK2Q86TB3 2170 aa13.54□□□□□ -0.24
SMG8-201ENST00000300917 RHPN2P1A8MT19 583 aa13.53□□□□□ -0.24
SMG8-201ENST00000300917 IGLV3-19P01714 112 aa13.53□□□□□ -0.24
SMG8-201ENST00000300917 ATP1B1P05026 303 aa13.53□□□□□ -0.24
SMG8-201ENST00000300917 PRKAR1BP31321 381 aa13.53□□□□□ -0.24
SMG8-201ENST00000300917 RAB38P57729 211 aa13.53□□□□□ -0.24
SMG8-201ENST00000300917 TTLL10Q6ZVT0 673 aa13.53□□□□□ -0.24
SMG8-201ENST00000300917 LHFPL3Q86UP9 236 aa13.53□□□□□ -0.24
SMG8-201ENST00000300917 ZNF619Q8N2I2 560 aa13.53□□□□□ -0.24
SMG8-201ENST00000300917 CDRT4Q8N9R6 151 aa13.53□□□□□ -0.24
SMG8-201ENST00000300917 AHCYL2Q96HN2 611 aaKnown RBP13.53□□□□□ -0.24
SMG8-201ENST00000300917 PSD2Q9BQI7 771 aa13.53□□□□□ -0.24
SMG8-201ENST00000300917 POLR2J2Q9GZM3 115 aaKnown RBP13.53□□□□□ -0.24
SMG8-201ENST00000300917 NECTIN3Q9NQS3 549 aa13.53□□□□□ -0.24
SMG8-201ENST00000300917 SLC2A4RGQ9NR83 387 aa13.53□□□□□ -0.24
SMG8-201ENST00000300917 MPZL2O60487 215 aa13.53□□□□□ -0.24
SMG8-201ENST00000300917 NME1P15531 152 aaKnown RBP13.53□□□□□ -0.24
SMG8-201ENST00000300917 CD79BP40259 229 aa13.53□□□□□ -0.24
SMG8-201ENST00000300917 CAPZBP47756 277 aa13.53□□□□□ -0.24
SMG8-201ENST00000300917 TGM4P49221 684 aa13.53□□□□□ -0.24
SMG8-201ENST00000300917 ZNF136P52737 540 aa13.53□□□□□ -0.24
SMG8-201ENST00000300917 SMSP52788 366 aa13.53□□□□□ -0.24
SMG8-201ENST00000300917 SLC16A1P53985 500 aa13.53□□□□□ -0.24
SMG8-201ENST00000300917 GKN2Q86XP6 184 aa13.53□□□□□ -0.24
SMG8-201ENST00000300917 GATAD2AQ86YP4 633 aa13.53□□□□□ -0.24
SMG8-201ENST00000300917 OR4Q3Q8NH05 313 aa13.53□□□□□ -0.24
SMG8-201ENST00000300917 OR51A7Q8NH64 312 aa13.53□□□□□ -0.24
SMG8-201ENST00000300917 HLA-CQ95604 372 aa13.53□□□□□ -0.24
SMG8-201ENST00000300917 ZNF582Q96NG8 517 aaPredicted RBP13.53□□□□□ -0.24
SMG8-201ENST00000300917 FSCN3Q9NQT6 498 aa13.53□□□□□ -0.24
SMG8-201ENST00000300917 YARS2Q9Y2Z4 477 aaKnown RBP13.53□□□□□ -0.24
SMG8-201ENST00000300917 HYKKA2RU49 373 aa13.52□□□□□ -0.24
SMG8-201ENST00000300917 ADAM11O75078 769 aa13.52□□□□□ -0.24
SMG8-201ENST00000300917 CSO75390 466 aaKnown RBP13.52□□□□□ -0.24
SMG8-201ENST00000300917 RPLP0P05388 317 aaKnown RBP13.52□□□□□ -0.24
SMG8-201ENST00000300917 BMP4P12644 408 aa13.52□□□□□ -0.24
SMG8-201ENST00000300917 IFI30P13284 250 aa13.52□□□□□ -0.24
SMG8-201ENST00000300917 ATP6V1E1P36543 226 aa13.52□□□□□ -0.24
SMG8-201ENST00000300917 OMPP47874 163 aa13.52□□□□□ -0.24
SMG8-201ENST00000300917 EMDP50402 254 aa13.52□□□□□ -0.24
SMG8-201ENST00000300917 BNC1Q01954 994 aa13.52□□□□□ -0.24
SMG8-201ENST00000300917 OR1Q1Q15612 314 aa13.52□□□□□ -0.24
SMG8-201ENST00000300917 PSD4Q8NDX1 1056 aa13.52□□□□□ -0.24
SMG8-201ENST00000300917 TMEM80Q96HE8 168 aa13.52□□□□□ -0.24
SMG8-201ENST00000300917 ART5Q96L15 291 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms