RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 OR56A1Q8NGH5 318 aa22.78■■□□□ 1.24
SPTSSA-201ENST00000298130 ARHGDIGQ99819 225 aa22.78■■□□□ 1.24
SPTSSA-201ENST00000298130 PTGFRNQ9P2B2 879 aa22.78■■□□□ 1.24
SPTSSA-201ENST00000298130 CLEC4AQ9UMR7 237 aa22.78■■□□□ 1.24
SPTSSA-201ENST00000298130 TRDV1A0A1B0GX56 115 aa22.77■■□□□ 1.24
SPTSSA-201ENST00000298130 ZNF860A6NHJ4 632 aa22.77■■□□□ 1.24
SPTSSA-201ENST00000298130 BTN3A3O00478 584 aa22.77■■□□□ 1.24
SPTSSA-201ENST00000298130 NFATC1O95644 943 aa22.77■■□□□ 1.24
SPTSSA-201ENST00000298130 CHRNB1P11230 501 aa22.77■■□□□ 1.24
SPTSSA-201ENST00000298130 PRMT2P55345 433 aa22.77■■□□□ 1.24
SPTSSA-201ENST00000298130 PGGHGQ32M88 737 aa22.77■■□□□ 1.24
SPTSSA-201ENST00000298130 MRM1Q6IN84 353 aaKnown RBP22.77■■□□□ 1.24
SPTSSA-201ENST00000298130 GHDCQ8N2G8 530 aa22.77■■□□□ 1.24
SPTSSA-201ENST00000298130 CAPN10Q9HC96 672 aa22.77■■□□□ 1.24
SPTSSA-201ENST00000298130 H2AFY2Q9P0M6 372 aaPredicted RBP22.77■■□□□ 1.24
SPTSSA-201ENST00000298130 A0A0G2JMP0 313 aa22.77■■□□□ 1.24
SPTSSA-201ENST00000298130 A0A0X1KG70 313 aa22.77■■□□□ 1.24
SPTSSA-201ENST00000298130 CACNB4O00305 520 aaPredicted RBP22.77■■□□□ 1.24
SPTSSA-201ENST00000298130 AKR7A2O43488 359 aa22.77■■□□□ 1.24
SPTSSA-201ENST00000298130 PROM1O43490 865 aa22.77■■□□□ 1.24
SPTSSA-201ENST00000298130 EML2O95834 649 aa22.77■■□□□ 1.24
SPTSSA-201ENST00000298130 IFNGR2P38484 337 aa22.77■■□□□ 1.24
SPTSSA-201ENST00000298130 TRA2BP62995 288 aaKnown RBP22.77■■□□□ 1.24
SPTSSA-201ENST00000298130 PPP3R1P63098 170 aa22.77■■□□□ 1.24
SPTSSA-201ENST00000298130 RNASE12Q5GAN4 147 aaKnown RBP22.77■■□□□ 1.24
SPTSSA-201ENST00000298130 TJAP1Q5JTD0 557 aa22.77■■□□□ 1.24
SPTSSA-201ENST00000298130 RD3Q7Z3Z2 195 aa22.77■■□□□ 1.24
SPTSSA-201ENST00000298130 ADGRD2Q7Z7M1 963 aa22.77■■□□□ 1.24
SPTSSA-201ENST00000298130 CADM2Q8N3J6 435 aa22.77■■□□□ 1.24
SPTSSA-201ENST00000298130 KLHL36Q8N4N3 616 aa22.77■■□□□ 1.24
SPTSSA-201ENST00000298130 LINC00471Q8N535 108 aa22.77■■□□□ 1.24
SPTSSA-201ENST00000298130 POGLUT1Q8NBL1 392 aa22.77■■□□□ 1.24
SPTSSA-201ENST00000298130 OR4M2Q8NGB6 313 aa22.77■■□□□ 1.24
SPTSSA-201ENST00000298130 PFN4Q8NHR9 129 aa22.77■■□□□ 1.24
SPTSSA-201ENST00000298130 GDF15Q99988 308 aa22.77■■□□□ 1.24
SPTSSA-201ENST00000298130 MED18Q9BUE0 208 aa22.77■■□□□ 1.24
SPTSSA-201ENST00000298130 GALNT9Q9HCQ5 603 aa22.77■■□□□ 1.24
SPTSSA-201ENST00000298130 TNFRSF10DQ9UBN6 386 aa22.77■■□□□ 1.24
SPTSSA-201ENST00000298130 GIMAP1-GIMAP5A0A087WTJ2 511 aa22.76■■□□□ 1.23
SPTSSA-201ENST00000298130 C12orf71A8MTZ7 269 aa22.76■■□□□ 1.23
SPTSSA-201ENST00000298130 LYRM1O43325 122 aa22.76■■□□□ 1.23
SPTSSA-201ENST00000298130 LANCL1O43813 399 aa22.76■■□□□ 1.23
SPTSSA-201ENST00000298130 ELK1P19419 428 aa22.76■■□□□ 1.23
SPTSSA-201ENST00000298130 PKLRP30613 574 aa22.76■■□□□ 1.23
SPTSSA-201ENST00000298130 INPP1P49441 399 aa22.76■■□□□ 1.23
SPTSSA-201ENST00000298130 EVX1P49640 407 aa22.76■■□□□ 1.23
SPTSSA-201ENST00000298130 EOGTQ5NDL2 527 aa22.76■■□□□ 1.23
SPTSSA-201ENST00000298130 LYPD8Q6UX82 237 aa22.76■■□□□ 1.23
SPTSSA-201ENST00000298130 TMEM64Q6YI46 380 aa22.76■■□□□ 1.23
SPTSSA-201ENST00000298130 GET4Q7L5D6 327 aaPredicted RBP22.76■■□□□ 1.23
SPTSSA-201ENST00000298130 TMEM99Q8N816 258 aa22.76■■□□□ 1.23
SPTSSA-201ENST00000298130 GIMAP5Q96F15 307 aa22.76■■□□□ 1.23
SPTSSA-201ENST00000298130 RMI1Q9H9A7 625 aa22.76■■□□□ 1.23
SPTSSA-201ENST00000298130 C20orf141Q9NUB4 165 aa22.76■■□□□ 1.23
SPTSSA-201ENST00000298130 FBXO34Q9NWN3 711 aa22.76■■□□□ 1.23
SPTSSA-201ENST00000298130 ACSL5Q9ULC5 683 aa22.76■■□□□ 1.23
SPTSSA-201ENST00000298130 ZNF780BQ9Y6R6 833 aa22.76■■□□□ 1.23
SPTSSA-201ENST00000298130 FGF9P31371 208 aaPredicted RBP22.76■■□□□ 1.23
SPTSSA-201ENST00000298130 RFX3P48380 749 aa22.76■■□□□ 1.23
SPTSSA-201ENST00000298130 EFR3AQ14156 821 aa22.76■■□□□ 1.23
SPTSSA-201ENST00000298130 ACOT11Q8WXI4 607 aaPredicted RBP22.76■■□□□ 1.23
SPTSSA-201ENST00000298130 ZNF681Q96N22 645 aa22.76■■□□□ 1.23
SPTSSA-201ENST00000298130 TEX101Q9BY14 249 aa22.76■■□□□ 1.23
SPTSSA-201ENST00000298130 HDAC8Q9BY41 377 aa22.76■■□□□ 1.23
SPTSSA-201ENST00000298130 CERS4Q9HA82 394 aa22.76■■□□□ 1.23
SPTSSA-201ENST00000298130 YES1P07947 543 aa22.75■■□□□ 1.23
SPTSSA-201ENST00000298130 ALAS2P22557 587 aa22.75■■□□□ 1.23
SPTSSA-201ENST00000298130 SEC13P55735 322 aa22.75■■□□□ 1.23
SPTSSA-201ENST00000298130 OR10A3P58181 314 aa22.75■■□□□ 1.23
SPTSSA-201ENST00000298130 DSG2Q14126 1118 aa22.75■■□□□ 1.23
SPTSSA-201ENST00000298130 GNA13Q14344 377 aa22.75■■□□□ 1.23
SPTSSA-201ENST00000298130 TMEM35AQ53FP2 167 aa22.75■■□□□ 1.23
SPTSSA-201ENST00000298130 CD200R1LQ6Q8B3 271 aa22.75■■□□□ 1.23
SPTSSA-201ENST00000298130 VITQ6UXI7 678 aa22.75■■□□□ 1.23
SPTSSA-201ENST00000298130 ZNF620Q6ZNG0 422 aa22.75■■□□□ 1.23
SPTSSA-201ENST00000298130 MRGPREQ86SM8 312 aa22.75■■□□□ 1.23
SPTSSA-201ENST00000298130 RPRD1BQ9NQG5 326 aaKnown RBP22.75■■□□□ 1.23
SPTSSA-201ENST00000298130 MYO9BQ13459 2157 aa22.75■■□□□ 1.23
SPTSSA-201ENST00000298130 E9PI62 339 aa22.75■■□□□ 1.23
SPTSSA-201ENST00000298130 SLC31A1O15431 190 aa22.75■■□□□ 1.23
SPTSSA-201ENST00000298130 HLA-DPB1P04440 258 aa22.75■■□□□ 1.23
SPTSSA-201ENST00000298130 ZGLP1P0C6A0 271 aa22.75■■□□□ 1.23
SPTSSA-201ENST00000298130 ZNF888P0CJ79 500 aaPredicted RBP22.75■■□□□ 1.23
SPTSSA-201ENST00000298130 PUS10Q3MIT2 529 aaKnown RBP22.75■■□□□ 1.23
SPTSSA-201ENST00000298130 ZNF322Q6U7Q0 402 aaPredicted RBP22.75■■□□□ 1.23
SPTSSA-201ENST00000298130 WDR88Q6ZMY6 472 aa22.75■■□□□ 1.23
SPTSSA-201ENST00000298130 FRRS1Q6ZNA5 592 aa22.75■■□□□ 1.23
SPTSSA-201ENST00000298130 REM2Q8IYK8 340 aaPredicted RBP22.75■■□□□ 1.23
SPTSSA-201ENST00000298130 FGF13Q92913 245 aa22.75■■□□□ 1.23
SPTSSA-201ENST00000298130 HDHD2Q9H0R4 259 aa22.75■■□□□ 1.23
SPTSSA-201ENST00000298130 IL20Q9NYY1 176 aa22.75■■□□□ 1.23
SPTSSA-201ENST00000298130 MAU2Q9Y6X3 613 aa22.75■■□□□ 1.23
SPTSSA-201ENST00000298130 AKAP8O43823 692 aaKnown RBP22.74■■□□□ 1.23
SPTSSA-201ENST00000298130 EFCAB14O75071 495 aa22.74■■□□□ 1.23
SPTSSA-201ENST00000298130 PAHP00439 452 aa22.74■■□□□ 1.23
SPTSSA-201ENST00000298130 CLUP10909 449 aa22.74■■□□□ 1.23
SPTSSA-201ENST00000298130 SHC1P29353 583 aa22.74■■□□□ 1.23
SPTSSA-201ENST00000298130 ANXA11P50995 505 aaKnown RBP22.74■■□□□ 1.23
SPTSSA-201ENST00000298130 CST6Q15828 149 aa22.74■■□□□ 1.23
SPTSSA-201ENST00000298130 MAPK14Q16539 360 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms