RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 SIPA1Q96FS4 1042 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 ALG8Q9BVK2 526 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 SLC25A18Q9H1K4 315 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 RETREG1Q9H6L5 497 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 PRAMEF27A3QJZ7 478 aa12.47□□□□□ -0.41
TNFRSF21-201ENST00000296861 LIMS3P0CW19 117 aa12.47□□□□□ -0.41
TNFRSF21-201ENST00000296861 LIMS4P0CW20 117 aa12.47□□□□□ -0.41
TNFRSF21-201ENST00000296861 EPCAMP16422 314 aa12.47□□□□□ -0.41
TNFRSF21-201ENST00000296861 ENDOUP21128 410 aaKnown RBP12.47□□□□□ -0.41
TNFRSF21-201ENST00000296861 PCBP3P57721 371 aaKnown RBP12.47□□□□□ -0.41
TNFRSF21-201ENST00000296861 C11orf88Q6PI97 169 aa12.47□□□□□ -0.41
TNFRSF21-201ENST00000296861 KIF18BQ86Y91 864 aa12.47□□□□□ -0.41
TNFRSF21-201ENST00000296861 NATD1Q8N6N6 113 aa12.47□□□□□ -0.41
TNFRSF21-201ENST00000296861 OR14C36Q8NHC7 312 aa12.47□□□□□ -0.41
TNFRSF21-201ENST00000296861 CEP76Q8TAP6 659 aa12.47□□□□□ -0.41
TNFRSF21-201ENST00000296861 ZMYND19Q96E35 227 aaPredicted RBP12.47□□□□□ -0.41
TNFRSF21-201ENST00000296861 CCDC86Q9H6F5 360 aaKnown RBP12.47□□□□□ -0.41
TNFRSF21-201ENST00000296861 HINT3Q9NQE9 182 aaKnown RBP12.47□□□□□ -0.41
TNFRSF21-201ENST00000296861 EVA1BQ9NVM1 165 aa12.47□□□□□ -0.41
TNFRSF21-201ENST00000296861 FBXL4Q9UKA2 621 aa12.47□□□□□ -0.41
TNFRSF21-201ENST00000296861 DIMT1Q9UNQ2 313 aaKnown RBP12.47□□□□□ -0.41
TNFRSF21-201ENST00000296861 TEX13CA0A0J9YWL9 993 aa12.47□□□□□ -0.41
TNFRSF21-201ENST00000296861 PRRT4C9JH25 899 aa12.47□□□□□ -0.41
TNFRSF21-201ENST00000296861 RLN1P04808 185 aa12.47□□□□□ -0.41
TNFRSF21-201ENST00000296861 ADH5P11766 374 aa12.47□□□□□ -0.41
TNFRSF21-201ENST00000296861 LAG3P18627 525 aa12.47□□□□□ -0.41
TNFRSF21-201ENST00000296861 ACSL1P33121 698 aa12.47□□□□□ -0.41
TNFRSF21-201ENST00000296861 ERVFC1P60507 584 aa12.47□□□□□ -0.41
TNFRSF21-201ENST00000296861 SGCGQ13326 291 aa12.47□□□□□ -0.41
TNFRSF21-201ENST00000296861 FAAP20Q6NZ36 180 aa12.47□□□□□ -0.41
TNFRSF21-201ENST00000296861 GPR135Q8IZ08 494 aa12.47□□□□□ -0.41
TNFRSF21-201ENST00000296861 ACBD7Q8N6N7 88 aa12.47□□□□□ -0.41
TNFRSF21-201ENST00000296861 TMEM99Q8N816 258 aa12.47□□□□□ -0.41
TNFRSF21-201ENST00000296861 TRMT10AQ8TBZ6 339 aaKnown RBP12.47□□□□□ -0.41
TNFRSF21-201ENST00000296861 CDS1Q92903 461 aa12.47□□□□□ -0.41
TNFRSF21-201ENST00000296861 CXorf40BQ96DE9 158 aa12.47□□□□□ -0.41
TNFRSF21-201ENST00000296861 MED30Q96HR3 178 aa12.47□□□□□ -0.41
TNFRSF21-201ENST00000296861 AMDHD1Q96NU7 426 aa12.47□□□□□ -0.41
TNFRSF21-201ENST00000296861 NKX3-1Q99801 234 aaPredicted RBP12.47□□□□□ -0.41
TNFRSF21-201ENST00000296861 SHISA3A0PJX4 238 aa12.46□□□□□ -0.41
TNFRSF21-201ENST00000296861 MID1O15344 667 aa12.46□□□□□ -0.41
TNFRSF21-201ENST00000296861 HCN1O60741 890 aa12.46□□□□□ -0.41
TNFRSF21-201ENST00000296861 PROS1P07225 676 aa12.46□□□□□ -0.41
TNFRSF21-201ENST00000296861 ADRB3P13945 408 aa12.46□□□□□ -0.41
TNFRSF21-201ENST00000296861 MPIP34949 423 aa12.46□□□□□ -0.41
TNFRSF21-201ENST00000296861 GZMKP49863 264 aa12.46□□□□□ -0.41
TNFRSF21-201ENST00000296861 SNRPGP62308 76 aaKnown RBP12.46□□□□□ -0.41
TNFRSF21-201ENST00000296861 ASAH1Q13510 395 aa12.46□□□□□ -0.41
TNFRSF21-201ENST00000296861 C2orf27AQ580R0 203 aa12.46□□□□□ -0.41
TNFRSF21-201ENST00000296861 GDPGP1Q6ZNW5 385 aa12.46□□□□□ -0.41
TNFRSF21-201ENST00000296861 ACOT4Q8N9L9 421 aa12.46□□□□□ -0.41
TNFRSF21-201ENST00000296861 OR2T33Q8NG76 320 aa12.46□□□□□ -0.41
TNFRSF21-201ENST00000296861 SNX33Q8WV41 574 aa12.46□□□□□ -0.41
TNFRSF21-201ENST00000296861 POLDIP3Q9BY77 421 aaKnown RBP12.46□□□□□ -0.41
TNFRSF21-201ENST00000296861 OR10A4Q9H209 315 aa12.46□□□□□ -0.41
TNFRSF21-201ENST00000296861 IGFLR1Q9H665 355 aa12.46□□□□□ -0.41
TNFRSF21-201ENST00000296861 OR6C2Q9NZP2 312 aa12.46□□□□□ -0.41
TNFRSF21-201ENST00000296861 KLHL42Q9P2K6 505 aa12.46□□□□□ -0.41
TNFRSF21-201ENST00000296861 CHST10O43529 356 aa12.46□□□□□ -0.41
TNFRSF21-201ENST00000296861 NARSO43776 548 aaKnown RBP12.46□□□□□ -0.41
TNFRSF21-201ENST00000296861 LDB3O75112 727 aa12.46□□□□□ -0.41
TNFRSF21-201ENST00000296861 KHDRBS3O75525 346 aaKnown RBP12.46□□□□□ -0.41
TNFRSF21-201ENST00000296861 PSMA3P25788 255 aa12.46□□□□□ -0.41
TNFRSF21-201ENST00000296861 TRHRP34981 398 aaPredicted RBP12.46□□□□□ -0.41
TNFRSF21-201ENST00000296861 RRAS2P62070 204 aaPredicted RBP12.46□□□□□ -0.41
TNFRSF21-201ENST00000296861 GPR176Q14439 515 aa12.46□□□□□ -0.41
TNFRSF21-201ENST00000296861 TMEM31Q5JXX7 168 aa12.46□□□□□ -0.41
TNFRSF21-201ENST00000296861 HES5Q5TA89 166 aa12.46□□□□□ -0.41
TNFRSF21-201ENST00000296861 PXDC1Q5TGL8 231 aa12.46□□□□□ -0.41
TNFRSF21-201ENST00000296861 SLC25A25Q6KCM7 469 aa12.46□□□□□ -0.41
TNFRSF21-201ENST00000296861 OR2T35Q8NGX2 323 aa12.46□□□□□ -0.41
TNFRSF21-201ENST00000296861 OR4K13Q8NH42 304 aa12.46□□□□□ -0.41
TNFRSF21-201ENST00000296861 LMLNQ96KR4 655 aa12.46□□□□□ -0.41
TNFRSF21-201ENST00000296861 TAPBPLQ9BX59 468 aa12.46□□□□□ -0.41
TNFRSF21-201ENST00000296861 MS4A8Q9BY19 250 aa12.46□□□□□ -0.41
TNFRSF21-201ENST00000296861 BTBD1Q9H0C5 482 aa12.46□□□□□ -0.41
TNFRSF21-201ENST00000296861 FKBP14Q9NWM8 211 aa12.46□□□□□ -0.41
TNFRSF21-201ENST00000296861 TRAPPC4Q9Y296 219 aa12.46□□□□□ -0.41
TNFRSF21-201ENST00000296861 IQCMA0A1B0GVH7 501 aa12.46□□□□□ -0.42
TNFRSF21-201ENST00000296861 FOXE1O00358 373 aaPredicted RBP12.46□□□□□ -0.42
TNFRSF21-201ENST00000296861 TSPAN9O75954 239 aa12.46□□□□□ -0.42
TNFRSF21-201ENST00000296861 RECKO95980 971 aa12.46□□□□□ -0.42
TNFRSF21-201ENST00000296861 PDX1P52945 283 aa12.46□□□□□ -0.42
TNFRSF21-201ENST00000296861 LYPD4Q6UWN0 246 aa12.46□□□□□ -0.42
TNFRSF21-201ENST00000296861 SPRED2Q7Z698 418 aa12.46□□□□□ -0.42
TNFRSF21-201ENST00000296861 FGD2Q7Z6J4 655 aa12.46□□□□□ -0.42
TNFRSF21-201ENST00000296861 ZNF761Q86XN6 746 aaPredicted RBP12.46□□□□□ -0.42
TNFRSF21-201ENST00000296861 GATSQ8NAP1 163 aa12.46□□□□□ -0.42
TNFRSF21-201ENST00000296861 ZFAND1Q8TCF1 268 aa12.46□□□□□ -0.42
TNFRSF21-201ENST00000296861 ORAI3Q9BRQ5 295 aa12.46□□□□□ -0.42
TNFRSF21-201ENST00000296861 RSPO3Q9BXY4 272 aaPredicted RBP12.46□□□□□ -0.42
TNFRSF21-201ENST00000296861 SLC25A19Q9HC21 320 aa12.46□□□□□ -0.42
TNFRSF21-201ENST00000296861 TBC1D3DA0A087WVF3 549 aa12.45□□□□□ -0.42
TNFRSF21-201ENST00000296861 TBC1D3IA0A087WXS9 549 aa12.45□□□□□ -0.42
TNFRSF21-201ENST00000296861 TBC1D3EA0A087X179 549 aa12.45□□□□□ -0.42
TNFRSF21-201ENST00000296861 TBC1D3KA0A087X1G2 549 aa12.45□□□□□ -0.42
TNFRSF21-201ENST00000296861 A0A1W2PP55 124 aa12.45□□□□□ -0.42
TNFRSF21-201ENST00000296861 TBC1D3FA6NER0 549 aaPredicted RBP12.45□□□□□ -0.42
TNFRSF21-201ENST00000296861 GRXCR1A8MXD5 290 aa12.45□□□□□ -0.42
TNFRSF21-201ENST00000296861 TBC1D3LB9A6J9 549 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms