RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 PDCD4Q53EL6 469 aaKnown RBP8.33□□□□□ -1.08
HMGN1-201ENST00000288344 KLHL26Q53HC5 615 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 LCE2CQ5TA81 110 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 C6orf163Q5TEZ5 329 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 SAXO2Q658L1 398 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 HEPHL1Q6MZM0 1159 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 CDC73Q6P1J9 531 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 POMZP3Q6PJE2 187 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 C6orf120Q7Z4R8 191 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 ADGRE4PQ86SQ3 457 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 PLCZ1Q86YW0 608 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 CLEC4FQ8N1N0 589 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 RPRMLQ8N4K4 120 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 CHDHQ8NE62 594 aaPredicted RBP8.33□□□□□ -1.08
HMGN1-201ENST00000288344 ZFP28Q8NHY6 868 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 SFXN5Q8TD22 340 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 PHF10Q8WUB8 498 aaKnown RBP8.33□□□□□ -1.08
HMGN1-201ENST00000288344 EFHD2Q96C19 240 aaPredicted RBP8.33□□□□□ -1.08
HMGN1-201ENST00000288344 MAGED4Q96JG8 741 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 MS4A4EQ96PG1 132 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 PRPF18Q99633 342 aaKnown RBP8.33□□□□□ -1.08
HMGN1-201ENST00000288344 TIMP4Q99727 224 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 VKORC1Q9BQB6 163 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 EBF4Q9BQW3 602 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 G6PC3Q9BUM1 346 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 DPY30Q9C005 99 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 OR2B2Q9GZK3 357 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 ZNF385DQ9H6B1 395 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 C3orf14Q9HBI5 128 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 ATAD3AQ9NVI7 634 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 BTNL2Q9UIR0 455 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 KCNE5Q9UJ90 142 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 FBXL2Q9UKC9 423 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 BOKQ9UMX3 212 aaPredicted RBP8.33□□□□□ -1.08
HMGN1-201ENST00000288344 ABCG2Q9UNQ0 655 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 FAM215AQ9Y5M1 114 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 GMEB1Q9Y692 573 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 ARHGAP21Q5T5U3 1957 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 PKDREJQ9NTG1 2253 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 TRGV5A0A0B4J1U4 118 aa8.32□□□□□ -1.08
HMGN1-201ENST00000288344 PRAMEF25A6NGN4 478 aa8.32□□□□□ -1.08
HMGN1-201ENST00000288344 ALG1L2C9J202 215 aa8.32□□□□□ -1.08
HMGN1-201ENST00000288344 E9PBE3 544 aa8.32□□□□□ -1.08
HMGN1-201ENST00000288344 ZG16O60844 167 aa8.32□□□□□ -1.08
HMGN1-201ENST00000288344 EDF1O60869 148 aaKnown RBP8.32□□□□□ -1.08
HMGN1-201ENST00000288344 CBR3O75828 277 aa8.32□□□□□ -1.08
HMGN1-201ENST00000288344 TOXO94900 526 aa8.32□□□□□ -1.08
HMGN1-201ENST00000288344 PGRP06401 933 aa8.32□□□□□ -1.08
HMGN1-201ENST00000288344 AGAP20933 346 aa8.32□□□□□ -1.08
HMGN1-201ENST00000288344 PSMA4P25789 261 aaKnown RBP8.32□□□□□ -1.08
HMGN1-201ENST00000288344 LCN1P31025 176 aa8.32□□□□□ -1.08
HMGN1-201ENST00000288344 EVI2BP34910 448 aa8.32□□□□□ -1.08
HMGN1-201ENST00000288344 CDKN2CP42773 168 aa8.32□□□□□ -1.08
HMGN1-201ENST00000288344 KIR3DL1P43629 444 aa8.32□□□□□ -1.08
HMGN1-201ENST00000288344 KCNJ2P63252 427 aa8.32□□□□□ -1.08
HMGN1-201ENST00000288344 FUT5Q11128 374 aa8.32□□□□□ -1.08
HMGN1-201ENST00000288344 GSTA3Q16772 222 aa8.32□□□□□ -1.08
HMGN1-201ENST00000288344 DPY19L1Q2PZI1 675 aa8.32□□□□□ -1.08
HMGN1-201ENST00000288344 GRAMD1BQ3KR37 738 aa8.32□□□□□ -1.08
HMGN1-201ENST00000288344 FAM174BQ3ZCQ3 159 aa8.32□□□□□ -1.08
HMGN1-201ENST00000288344 EIPR1Q53HC9 387 aa8.32□□□□□ -1.08
HMGN1-201ENST00000288344 CGB2Q6NT52 195 aa8.32□□□□□ -1.08
HMGN1-201ENST00000288344 NCCRP1Q6ZVX7 275 aaPredicted RBP8.32□□□□□ -1.08
HMGN1-201ENST00000288344 FJX1Q86VR8 437 aa8.32□□□□□ -1.08
HMGN1-201ENST00000288344 OR2M3Q8NG83 312 aa8.32□□□□□ -1.08
HMGN1-201ENST00000288344 TMCO6Q96DC7 493 aa8.32□□□□□ -1.08
HMGN1-201ENST00000288344 WDYHV1Q96HA8 205 aa8.32□□□□□ -1.08
HMGN1-201ENST00000288344 ZNF597Q96LX8 424 aa8.32□□□□□ -1.08
HMGN1-201ENST00000288344 SDF2Q99470 211 aa8.32□□□□□ -1.08
HMGN1-201ENST00000288344 INPP5KQ9BT40 448 aa8.32□□□□□ -1.08
HMGN1-201ENST00000288344 CCDC28BQ9BUN5 200 aa8.32□□□□□ -1.08
HMGN1-201ENST00000288344 BTBD2Q9BX70 525 aa8.32□□□□□ -1.08
HMGN1-201ENST00000288344 OSBPL11Q9BXB4 747 aa8.32□□□□□ -1.08
HMGN1-201ENST00000288344 RSPO3Q9BXY4 272 aaPredicted RBP8.32□□□□□ -1.08
HMGN1-201ENST00000288344 ACTRT3Q9BYD9 372 aa8.32□□□□□ -1.08
HMGN1-201ENST00000288344 PRDM14Q9GZV8 571 aa8.32□□□□□ -1.08
HMGN1-201ENST00000288344 CCDC134Q9H6E4 229 aa8.32□□□□□ -1.08
HMGN1-201ENST00000288344 Q9N2J8 555 aa8.32□□□□□ -1.08
HMGN1-201ENST00000288344 NPHS2Q9NP85 383 aa8.32□□□□□ -1.08
HMGN1-201ENST00000288344 PNPLA3Q9NST1 481 aa8.32□□□□□ -1.08
HMGN1-201ENST00000288344 ZCCHC3Q9NUD5 404 aaKnown RBP8.32□□□□□ -1.08
HMGN1-201ENST00000288344 INTS9Q9NV88 658 aaKnown RBP8.32□□□□□ -1.08
HMGN1-201ENST00000288344 FAM120CQ9NX05 1096 aaKnown RBP8.32□□□□□ -1.08
HMGN1-201ENST00000288344 ZIM2Q9NZV7 527 aa8.32□□□□□ -1.08
HMGN1-201ENST00000288344 WIF1Q9Y5W5 379 aa8.32□□□□□ -1.08
HMGN1-201ENST00000288344 TEX15Q9BXT5 2789 aa8.32□□□□□ -1.08
HMGN1-201ENST00000288344 PDZD2O15018 2839 aa8.32□□□□□ -1.08
HMGN1-201ENST00000288344 INTS1Q8N201 2190 aaKnown RBP8.31□□□□□ -1.08
HMGN1-201ENST00000288344 TRGV8A0A0C4DH27 118 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 A0A1W2PQD3 144 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 KDM4EB2RXH2 506 aaPredicted RBP8.31□□□□□ -1.08
HMGN1-201ENST00000288344 C9JVG2 144 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 ACOT7O00154 380 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 CCL21O00585 134 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 GNB5O14775 395 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 ATP8B1O43520 1251 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 SOX30O94993 753 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 AGFG2O95081 481 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 UTS2O95399 124 aa8.31□□□□□ -1.08
HMGN1-201ENST00000288344 OXSR1O95747 527 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms