RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 DTX3Q8N9I9 347 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 OR5K2Q8NHB8 316 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 GATAD2BQ8WXI9 593 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 RFKQ969G6 155 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 OTUB1Q96FW1 271 aaPredicted RBP9.72□□□□□ -0.85
SKA1-201ENST00000285116 AMDHD1Q96NU7 426 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 SLC38A2Q96QD8 506 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 OR2M2Q96R28 347 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 WFDC6Q9BQY6 131 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 ZNF649Q9BS31 505 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 LYARQ9NX58 379 aaKnown RBP9.72□□□□□ -0.85
SKA1-201ENST00000285116 LIPT1Q9Y234 373 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 SLC27A6Q9Y2P4 619 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 FREM2Q5SZK8 3169 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 A0A1B0GVI7 797 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 GTPBP1O00178 669 aaKnown RBP9.72□□□□□ -0.85
SKA1-201ENST00000285116 ICAM2P13598 275 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 BMP8BP34820 402 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 LY6G5CQ5SRR4 150 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 KIAA1324Q6UXG2 1013 aaKnown RBP9.72□□□□□ -0.85
SKA1-201ENST00000285116 ADAMTSL4Q6UY14 1074 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 RTL4Q6ZR62 310 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 BMP8AQ7Z5Y6 402 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 IQCF1Q8N6M8 205 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 C12orf76Q8N812 135 aaPredicted RBP9.72□□□□□ -0.85
SKA1-201ENST00000285116 TEX47Q8TBZ9 253 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 RAB8BQ92930 207 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 TOX2Q96NM4 488 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 GPA33Q99795 319 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 IGFLR1Q9H665 355 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 ZDHHC4Q9NPG8 344 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 CBLCQ9ULV8 474 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 KHNYNO15037 678 aaKnown RBP9.71□□□□□ -0.85
SKA1-201ENST00000285116 GPR37O15354 613 aa9.71□□□□□ -0.85
SKA1-201ENST00000285116 TMPRSS11DO60235 418 aa9.71□□□□□ -0.85
SKA1-201ENST00000285116 FGBP02675 491 aa9.71□□□□□ -0.85
SKA1-201ENST00000285116 ADH1AP07327 375 aa9.71□□□□□ -0.85
SKA1-201ENST00000285116 CD53P19397 219 aa9.71□□□□□ -0.85
SKA1-201ENST00000285116 ZNF81P51508 661 aa9.71□□□□□ -0.85
SKA1-201ENST00000285116 PRMT2P55345 433 aa9.71□□□□□ -0.85
SKA1-201ENST00000285116 CSTF1Q05048 431 aaKnown RBP9.71□□□□□ -0.85
SKA1-201ENST00000285116 PIN1Q13526 163 aaPredicted RBP9.71□□□□□ -0.85
SKA1-201ENST00000285116 SYPL1Q16563 259 aa9.71□□□□□ -0.85
SKA1-201ENST00000285116 LGALSLQ3ZCW2 172 aaPredicted RBP9.71□□□□□ -0.85
SKA1-201ENST00000285116 ARHGAP15Q53QZ3 475 aa9.71□□□□□ -0.85
SKA1-201ENST00000285116 AADACL4Q5VUY2 407 aa9.71□□□□□ -0.85
SKA1-201ENST00000285116 TMEM81Q6P7N7 255 aa9.71□□□□□ -0.85
SKA1-201ENST00000285116 ERN2Q76MJ5 926 aaKnown RBP9.71□□□□□ -0.85
SKA1-201ENST00000285116 TRMT11Q7Z4G4 463 aaKnown RBP9.71□□□□□ -0.85
SKA1-201ENST00000285116 IQCHQ86VS3 1027 aa9.71□□□□□ -0.85
SKA1-201ENST00000285116 KREMEN2Q8NCW0 462 aa9.71□□□□□ -0.85
SKA1-201ENST00000285116 TTLQ8NG68 377 aa9.71□□□□□ -0.85
SKA1-201ENST00000285116 RFT1Q96AA3 541 aa9.71□□□□□ -0.85
SKA1-201ENST00000285116 NXPE2Q96DL1 559 aa9.71□□□□□ -0.85
SKA1-201ENST00000285116 RBP7Q96R05 134 aa9.71□□□□□ -0.85
SKA1-201ENST00000285116 F2RL3Q96RI0 385 aa9.71□□□□□ -0.85
SKA1-201ENST00000285116 GSX2Q9BZM3 304 aa9.71□□□□□ -0.85
SKA1-201ENST00000285116 BTBD1Q9H0C5 482 aa9.71□□□□□ -0.85
SKA1-201ENST00000285116 ABCG5Q9H222 651 aa9.71□□□□□ -0.85
SKA1-201ENST00000285116 OR51J1Q9H342 316 aa9.71□□□□□ -0.85
SKA1-201ENST00000285116 EXTL2Q9UBQ6 330 aa9.71□□□□□ -0.85
SKA1-201ENST00000285116 MAB21L2Q9Y586 359 aa9.71□□□□□ -0.85
SKA1-201ENST00000285116 LRRTM2O43300 516 aa9.71□□□□□ -0.86
SKA1-201ENST00000285116 KLF4O43474 513 aa9.71□□□□□ -0.86
SKA1-201ENST00000285116 MPC2O95563 127 aa9.71□□□□□ -0.86
SKA1-201ENST00000285116 HLA-DPB1P04440 258 aa9.71□□□□□ -0.86
SKA1-201ENST00000285116 OR12D1P0DN82 309 aa9.71□□□□□ -0.86
SKA1-201ENST00000285116 ZP3P21754 424 aa9.71□□□□□ -0.86
SKA1-201ENST00000285116 STAT5AP42229 794 aa9.71□□□□□ -0.86
SKA1-201ENST00000285116 GPR1P46091 355 aa9.71□□□□□ -0.86
SKA1-201ENST00000285116 FUT5Q11128 374 aa9.71□□□□□ -0.86
SKA1-201ENST00000285116 HSPB3Q12988 150 aa9.71□□□□□ -0.86
SKA1-201ENST00000285116 CEBPEQ15744 281 aa9.71□□□□□ -0.86
SKA1-201ENST00000285116 HSD17B12Q53GQ0 312 aa9.71□□□□□ -0.86
SKA1-201ENST00000285116 HACD4Q5VWC8 232 aa9.71□□□□□ -0.86
SKA1-201ENST00000285116 OR6T1Q8NGN1 323 aa9.71□□□□□ -0.86
SKA1-201ENST00000285116 OR10Z1Q8NGY1 313 aa9.71□□□□□ -0.86
SKA1-201ENST00000285116 NEIL3Q8TAT5 605 aa9.71□□□□□ -0.86
SKA1-201ENST00000285116 CYB5D2Q8WUJ1 264 aa9.71□□□□□ -0.86
SKA1-201ENST00000285116 THAP7Q9BT49 309 aaPredicted RBP9.71□□□□□ -0.86
SKA1-201ENST00000285116 SAP130Q9H0E3 1048 aa9.71□□□□□ -0.86
SKA1-201ENST00000285116 ABCG4Q9H172 646 aa9.71□□□□□ -0.86
SKA1-201ENST00000285116 GLIPR2Q9H4G4 154 aa9.71□□□□□ -0.86
SKA1-201ENST00000285116 RDH8Q9NYR8 311 aa9.71□□□□□ -0.86
SKA1-201ENST00000285116 CSNK1G3Q9Y6M4 447 aa9.71□□□□□ -0.86
SKA1-201ENST00000285116 A0A1W2PPV9 198 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 A0A1W2PRG6 482 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 J3QRE1 110 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 M0R3H8 397 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 MAN2B1O00754 1011 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 HRO43593 1189 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 PPM1BO75688 479 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 NCR1O76036 304 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 PAHP00439 452 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 NR2F1P10589 423 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 FPR3P25089 353 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 SLC1A3P43003 542 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 SLC6A11P48066 632 aa9.7□□□□□ -0.86
SKA1-201ENST00000285116 DBPQ10586 325 aaPredicted RBP9.7□□□□□ -0.86
SKA1-201ENST00000285116 ZNF155Q12901 538 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms