RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 CRTC2Q53ET0 693 aaPredicted RBP9.67□□□□□ -0.86
UPF3B-201ENST00000276201 PAQR6Q6TCH4 344 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 USP45Q70EL2 814 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 GPR32P1Q8NGA4 272 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 OR2I1PQ8NGU4 316 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 LRRC20Q8TCA0 184 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 KLK6Q92876 244 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 EFCAB11Q9BUY7 163 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 ATG10Q9H0Y0 220 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 NARFLQ9H6Q4 476 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 SEMA3GQ9NS98 782 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 WDR70Q9NW82 654 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 CUEDC1Q9NWM3 386 aaPredicted RBP9.67□□□□□ -0.86
UPF3B-201ENST00000276201 NLKQ9UBE8 527 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 KCNE2Q9Y6J6 123 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 A0A1B0GVI7 797 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 A0A1B0GVT2 93 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 A0A1W2PRB8 838 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 UPK3BL1B0FP48 263 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 UPK3BL2E5RIL1 263 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 CDX4O14627 284 aaPredicted RBP9.67□□□□□ -0.86
UPF3B-201ENST00000276201 KLHL18O94889 574 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 HLA-DPB1P04440 258 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 CTRB1P17538 263 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 TALDO1P37837 337 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 RFX3P48380 749 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 GIPRP48546 466 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 SMSP52788 366 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 RPS13P62277 151 aaKnown RBP9.67□□□□□ -0.86
UPF3B-201ENST00000276201 FABP5Q01469 135 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 FGL2Q14314 439 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 STPG1Q5TH74 334 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 CTRB2Q6GPI1 263 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 C1orf94Q6P1W5 598 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 BRAT1Q6PJG6 821 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 TSPAN33Q86UF1 283 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 GRAMD2AQ8IUY3 354 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 ZNF680Q8NEM1 530 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 C1GALT1C1Q96EU7 318 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 OR2M2Q96R28 347 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 C1QTNF7Q9BXJ2 289 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 NLNQ9BYT8 704 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 DMRT3Q9NQL9 472 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 EMC3Q9P0I2 261 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 A0A1W2PR77 199 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 CHST10O43529 356 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 TSPAN6O43657 245 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 OR10H3O60404 316 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 HPGDSO60760 199 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 DHFRP00374 187 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 CATP04040 527 aaKnown RBP9.66□□□□□ -0.86
UPF3B-201ENST00000276201 WNT1P04628 370 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 TNNI3P19429 210 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 SPINT3P49223 89 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 RPS21P63220 83 aaKnown RBP9.66□□□□□ -0.86
UPF3B-201ENST00000276201 PTSQ03393 145 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 C2orf80Q0P641 193 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 MFSD13AQ14CX5 517 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 GPR139Q6DWJ6 353 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 KIAA1161Q6NSJ0 714 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 COMMD6Q7Z4G1 85 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 KIF18BQ86Y91 864 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 LRRC17Q8N6Y2 441 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 POGLUT1Q8NBL1 392 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 OR4K1Q8NGD4 311 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 OR52N1Q8NH53 320 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 OR5P2Q8WZ92 322 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 NACC2Q96BF6 587 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 AIFM2Q9BRQ8 373 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 GHITMQ9H3K2 345 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 HEXA-AS1Q9H8Q6 139 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 ZFP64Q9NPA5 681 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 TMEM9BQ9NQ34 198 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 CDV3Q9UKY7 258 aaKnown RBP9.66□□□□□ -0.86
UPF3B-201ENST00000276201 CA5BQ9Y2D0 317 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 FKBP7Q9Y680 259 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 KNL1Q8NG31 2342 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 TRPM6Q9BX84 2022 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 IGLON5A6NGN9 336 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 SLC31A1O15431 190 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 PLOD3O60568 738 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 LIMS3P0CW19 117 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 LIMS4P0CW20 117 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 CD53P19397 219 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 EVI2BP34910 448 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 MTNR1BP49286 362 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 NAE1Q13564 534 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 DDX39BQ13838 428 aaKnown RBP9.66□□□□□ -0.86
UPF3B-201ENST00000276201 GINS1Q14691 196 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 P2RY14Q15391 338 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 ANGPTL8Q6UXH0 198 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 WDR53Q7Z5U6 358 aaPredicted RBP9.66□□□□□ -0.86
UPF3B-201ENST00000276201 ADGRF3Q8IZF5 1079 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 SENP5Q96HI0 755 aaPredicted RBP9.66□□□□□ -0.86
UPF3B-201ENST00000276201 C17orf62Q9BQA9 187 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 C7orf50Q9BRJ6 194 aaKnown RBP9.66□□□□□ -0.86
UPF3B-201ENST00000276201 C1QTNF2Q9BXJ5 285 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 PRRG3Q9BZD7 231 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 MED28Q9H204 178 aa9.66□□□□□ -0.86
UPF3B-201ENST00000276201 GALNT9Q9HCQ5 603 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms