RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 OR4K3Q96R72 315 aa12.88□□□□□ -0.35
NPC1-201ENST00000269228 MGLLQ99685 303 aa12.88□□□□□ -0.35
NPC1-201ENST00000269228 GPR83Q9NYM4 423 aa12.88□□□□□ -0.35
NPC1-201ENST00000269228 KLHL21Q9UJP4 597 aa12.88□□□□□ -0.35
NPC1-201ENST00000269228 FAM171A2A8MVW0 826 aa12.88□□□□□ -0.35
NPC1-201ENST00000269228 PSKH1P11801 424 aa12.88□□□□□ -0.35
NPC1-201ENST00000269228 ACPPP15309 386 aa12.88□□□□□ -0.35
NPC1-201ENST00000269228 MTNR1AP48039 350 aa12.88□□□□□ -0.35
NPC1-201ENST00000269228 CAPZA1P52907 286 aa12.88□□□□□ -0.35
NPC1-201ENST00000269228 TUBA3CQ13748 450 aa12.88□□□□□ -0.35
NPC1-201ENST00000269228 RETREG3Q86VR2 466 aa12.88□□□□□ -0.35
NPC1-201ENST00000269228 UBALD2Q8IYN6 164 aa12.88□□□□□ -0.35
NPC1-201ENST00000269228 ISL2Q96A47 359 aa12.88□□□□□ -0.35
NPC1-201ENST00000269228 CPNE2Q96FN4 548 aaPredicted RBP12.88□□□□□ -0.35
NPC1-201ENST00000269228 C16orf58Q96GQ5 468 aa12.88□□□□□ -0.35
NPC1-201ENST00000269228 CCDC115Q96NT0 180 aa12.88□□□□□ -0.35
NPC1-201ENST00000269228 ADAM15Q13444 863 aa12.88□□□□□ -0.35
NPC1-201ENST00000269228 LTB4RQ15722 352 aa12.88□□□□□ -0.35
NPC1-201ENST00000269228 FBXO42Q6P3S6 717 aa12.88□□□□□ -0.35
NPC1-201ENST00000269228 ZFP41Q8N8Y5 198 aa12.88□□□□□ -0.35
NPC1-201ENST00000269228 CCL4L1Q8NHW4 92 aa12.88□□□□□ -0.35
NPC1-201ENST00000269228 THRSPQ92748 146 aa12.88□□□□□ -0.35
NPC1-201ENST00000269228 CFHR5Q9BXR6 569 aa12.88□□□□□ -0.35
NPC1-201ENST00000269228 OR5K3A6NET4 321 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 FBP2O00757 339 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 ORC5O43913 435 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 CPNE6O95741 557 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 POU4F2Q12837 409 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 SPHARQ15513 63 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 GPR19Q15760 415 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 TSSK4Q6SA08 328 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 TRIM46Q7Z4K8 759 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 TSPYL5Q86VY4 417 aaPredicted RBP12.87□□□□□ -0.35
NPC1-201ENST00000269228 SPEM1Q8N4L4 309 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 CST11Q9H112 138 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 UBQLN4Q9NRR5 601 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 TRBV2A0A0J9YWF9 115 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 SLC19A1P41440 591 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 STARP49675 285 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 LIMS2Q7Z4I7 341 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 CEACAM19Q7Z692 300 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 TOMM5Q8N4H5 51 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 NEIL3Q8TAT5 605 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 DHRS1Q96LJ7 313 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 GRIP1Q9Y3R0 1128 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 PRAMEF33A0A0G2JMD5 474 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 SULT2B1O00204 365 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 PRAMEF10O60809 474 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 SLC5A2P31639 672 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 GGT2P36268 569 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 RIDAP52758 137 aaKnown RBP12.87□□□□□ -0.35
NPC1-201ENST00000269228 HNRNPA0Q13151 305 aaKnown RBP12.87□□□□□ -0.35
NPC1-201ENST00000269228 ZNF404Q494X3 552 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 ABCA11PQ4W5N1 156 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 TNFAIP8L3Q5GJ75 292 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 PIP5KL1Q5T9C9 394 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 KIAA1211LQ6NV74 962 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 OR8J2Q8NGG1 315 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 RBM24Q9BX46 236 aaKnown RBP12.87□□□□□ -0.35
NPC1-201ENST00000269228 SCN1AP35498 2009 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 FURINP09958 794 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 MTHFD2P13995 350 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 CHRNEQ04844 493 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 FAM189A2Q15884 450 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 NDUFA5Q16718 116 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 HSD17B12Q53GQ0 312 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 ABHD17CQ6PCB6 329 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 OPN5Q6U736 354 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 TECPR1Q7Z6L1 1165 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 GPALPP1Q8IXQ4 340 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 MARVELD2Q8N4S9 558 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 CCDC54Q8NEL0 328 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 PPP1R14BQ96C90 147 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 PRRC1Q96M27 445 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 SLC29A1Q99808 456 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 C1QTNF2Q9BXJ5 285 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 GORASP2Q9H8Y8 452 aa12.87□□□□□ -0.35
NPC1-201ENST00000269228 SLC1A7O00341 560 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 GDF1P27539 372 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 PRPS1P60891 318 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 KCNJ10P78508 379 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 FOXK1P85037 733 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 OR7A5Q15622 319 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 UGT8Q16880 541 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 SCGB2B2Q4G0G5 96 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.86□□□□□ -0.35
NPC1-201ENST00000269228 HMBOX1Q6NT76 420 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 CPOQ8IVL8 374 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 SPNS2Q8IVW8 549 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 OR14A16Q8NHC5 309 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 ADAMTS16Q8TE57 1224 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 TREX2Q9BQ50 279 aaPredicted RBP12.86□□□□□ -0.35
NPC1-201ENST00000269228 TAS2R10Q9NYW0 307 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 POU2F3Q9UKI9 436 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 DHDHQ9UQ10 334 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 H0YJX3 145 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 PLRG1O43660 514 aaKnown RBP12.86□□□□□ -0.35
NPC1-201ENST00000269228 OR2T1O43869 369 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 CCR5P51681 352 aa12.86□□□□□ -0.35
NPC1-201ENST00000269228 RAB39AQ14964 217 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms