RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 AGPAT4Q9NRZ5 378 aa11.65□□□□□ -0.54
SS18-202ENST00000269138 KCNE5Q9UJ90 142 aa11.65□□□□□ -0.54
SS18-202ENST00000269138 MKLN1Q9UL63 735 aa11.65□□□□□ -0.54
SS18-202ENST00000269138 BOKQ9UMX3 212 aaPredicted RBP11.65□□□□□ -0.54
SS18-202ENST00000269138 NINQ8N4C6 2090 aa11.65□□□□□ -0.54
SS18-202ENST00000269138 CENPVL1A0A0U1RR11 272 aa11.65□□□□□ -0.55
SS18-202ENST00000269138 NPIPB9F8W1W9 429 aa11.65□□□□□ -0.55
SS18-202ENST00000269138 FXYD1O00168 92 aa11.65□□□□□ -0.55
SS18-202ENST00000269138 TFECO14948 347 aaPredicted RBP11.65□□□□□ -0.55
SS18-202ENST00000269138 SNPHO15079 494 aa11.65□□□□□ -0.55
SS18-202ENST00000269138 ZNHIT1O43257 154 aa11.65□□□□□ -0.55
SS18-202ENST00000269138 H6PDO95479 791 aa11.65□□□□□ -0.55
SS18-202ENST00000269138 AGR2O95994 175 aa11.65□□□□□ -0.55
SS18-202ENST00000269138 AK1P00568 194 aa11.65□□□□□ -0.55
SS18-202ENST00000269138 CHRM4P08173 479 aa11.65□□□□□ -0.55
SS18-202ENST00000269138 TBXA2RP21731 343 aa11.65□□□□□ -0.55
SS18-202ENST00000269138 MAGEA5P43359 124 aa11.65□□□□□ -0.55
SS18-202ENST00000269138 DSTNP60981 165 aa11.65□□□□□ -0.55
SS18-202ENST00000269138 CHRNEQ04844 493 aa11.65□□□□□ -0.55
SS18-202ENST00000269138 GPR68Q15743 365 aa11.65□□□□□ -0.55
SS18-202ENST00000269138 HYAL4Q2M3T9 481 aa11.65□□□□□ -0.55
SS18-202ENST00000269138 FLYWCH1Q4VC44 716 aa11.65□□□□□ -0.55
SS18-202ENST00000269138 GPAT3Q53EU6 434 aa11.65□□□□□ -0.55
SS18-202ENST00000269138 CMPK2Q5EBM0 449 aa11.65□□□□□ -0.55
SS18-202ENST00000269138 TIGD3Q6B0B8 471 aa11.65□□□□□ -0.55
SS18-202ENST00000269138 FRRS1Q6ZNA5 592 aa11.65□□□□□ -0.55
SS18-202ENST00000269138 GATSQ8NAP1 163 aa11.65□□□□□ -0.55
SS18-202ENST00000269138 RP9Q8TA86 221 aaKnown RBP11.65□□□□□ -0.55
SS18-202ENST00000269138 DUSP19Q8WTR2 217 aa11.65□□□□□ -0.55
SS18-202ENST00000269138 RCN3Q96D15 328 aa11.65□□□□□ -0.55
SS18-202ENST00000269138 ZG16BQ96DA0 208 aa11.65□□□□□ -0.55
SS18-202ENST00000269138 ANKRD27Q96NW4 1050 aa11.65□□□□□ -0.55
SS18-202ENST00000269138 TBL1XR1Q9BZK7 514 aa11.65□□□□□ -0.55
SS18-202ENST00000269138 ZNF350Q9GZX5 532 aa11.65□□□□□ -0.55
SS18-202ENST00000269138 UBQLN4Q9NRR5 601 aa11.65□□□□□ -0.55
SS18-202ENST00000269138 ABCG2Q9UNQ0 655 aa11.65□□□□□ -0.55
SS18-202ENST00000269138 WIF1Q9Y5W5 379 aa11.65□□□□□ -0.55
SS18-202ENST00000269138 BBIP1A8MTZ0 92 aa11.64□□□□□ -0.55
SS18-202ENST00000269138 ALG1L2C9J202 215 aa11.64□□□□□ -0.55
SS18-202ENST00000269138 TNFRSF21O75509 655 aa11.64□□□□□ -0.55
SS18-202ENST00000269138 STX11O75558 287 aa11.64□□□□□ -0.55
SS18-202ENST00000269138 PDE9AO76083 593 aa11.64□□□□□ -0.55
SS18-202ENST00000269138 ANGPTL1O95841 491 aa11.64□□□□□ -0.55
SS18-202ENST00000269138 NGFRP08138 427 aa11.64□□□□□ -0.55
SS18-202ENST00000269138 TFPTP0C1Z6 253 aa11.64□□□□□ -0.55
SS18-202ENST00000269138 NR2F1P10589 423 aa11.64□□□□□ -0.55
SS18-202ENST00000269138 LCN1P31025 176 aa11.64□□□□□ -0.55
SS18-202ENST00000269138 DCTP40126 519 aa11.64□□□□□ -0.55
SS18-202ENST00000269138 MAGEA8P43361 318 aa11.64□□□□□ -0.55
SS18-202ENST00000269138 ANXA11P50995 505 aaKnown RBP11.64□□□□□ -0.55
SS18-202ENST00000269138 ATP12AP54707 1039 aa11.64□□□□□ -0.55
SS18-202ENST00000269138 MTPNP58546 118 aa11.64□□□□□ -0.55
SS18-202ENST00000269138 TXNL4AP83876 142 aaKnown RBP11.64□□□□□ -0.55
SS18-202ENST00000269138 FOXK1P85037 733 aa11.64□□□□□ -0.55
SS18-202ENST00000269138 HSF1Q00613 529 aa11.64□□□□□ -0.55
SS18-202ENST00000269138 CD226Q15762 336 aa11.64□□□□□ -0.55
SS18-202ENST00000269138 MAPK14Q16539 360 aa11.64□□□□□ -0.55
SS18-202ENST00000269138 TRMT5Q32P41 509 aaKnown RBP11.64□□□□□ -0.55
SS18-202ENST00000269138 COQ5Q5HYK3 327 aa11.64□□□□□ -0.55
SS18-202ENST00000269138 GKAP1Q5VSY0 366 aaPredicted RBP11.64□□□□□ -0.55
SS18-202ENST00000269138 TYW3Q6IPR3 259 aaKnown RBP11.64□□□□□ -0.55
SS18-202ENST00000269138 SLC22A16Q86VW1 577 aa11.64□□□□□ -0.55
SS18-202ENST00000269138 ANKS4BQ8N8V4 417 aa11.64□□□□□ -0.55
SS18-202ENST00000269138 OR1J4Q8NGS1 313 aa11.64□□□□□ -0.55
SS18-202ENST00000269138 MAL2Q969L2 176 aa11.64□□□□□ -0.55
SS18-202ENST00000269138 LRRC58Q96CX6 371 aa11.64□□□□□ -0.55
SS18-202ENST00000269138 TRNT1Q96Q11 434 aaKnown RBP11.64□□□□□ -0.55
SS18-202ENST00000269138 SLC38A1Q9H2H9 487 aa11.64□□□□□ -0.55
SS18-202ENST00000269138 RAD21L1Q9H4I0 556 aa11.64□□□□□ -0.55
SS18-202ENST00000269138 RUBCNLQ9H714 662 aa11.64□□□□□ -0.55
SS18-202ENST00000269138 ZNF703Q9H7S9 590 aaPredicted RBP11.64□□□□□ -0.55
SS18-202ENST00000269138 ZDHHC11Q9H8X9 412 aa11.64□□□□□ -0.55
SS18-202ENST00000269138 MED11Q9P086 117 aa11.64□□□□□ -0.55
SS18-202ENST00000269138 FBXL2Q9UKC9 423 aa11.64□□□□□ -0.55
SS18-202ENST00000269138 C15orf41Q9Y2V0 281 aa11.64□□□□□ -0.55
SS18-202ENST00000269138 WDR45Q9Y484 360 aa11.64□□□□□ -0.55
SS18-202ENST00000269138 LIPGQ9Y5X9 500 aa11.64□□□□□ -0.55
SS18-202ENST00000269138 GMEB1Q9Y692 573 aa11.64□□□□□ -0.55
SS18-202ENST00000269138 SHANK1Q9Y566 2161 aa11.64□□□□□ -0.55
SS18-202ENST00000269138 EVPLLA8MZ36 301 aa11.63□□□□□ -0.55
SS18-202ENST00000269138 ACOT7O00154 380 aa11.63□□□□□ -0.55
SS18-202ENST00000269138 SCDO00767 359 aa11.63□□□□□ -0.55
SS18-202ENST00000269138 AIM2O14862 343 aa11.63□□□□□ -0.55
SS18-202ENST00000269138 OIP5O43482 229 aa11.63□□□□□ -0.55
SS18-202ENST00000269138 KIAA0513O60268 411 aa11.63□□□□□ -0.55
SS18-202ENST00000269138 CDC40O60508 579 aaKnown RBP eCLIP11.63□□□□□ -0.55
SS18-202ENST00000269138 CBX6O95503 412 aa11.63□□□□□ -0.55
SS18-202ENST00000269138 BMP2P12643 396 aa11.63□□□□□ -0.55
SS18-202ENST00000269138 PLA2G2AP14555 144 aa11.63□□□□□ -0.55
SS18-202ENST00000269138 GPX2P18283 190 aa11.63□□□□□ -0.55
SS18-202ENST00000269138 PPIBP23284 216 aaKnown RBP11.63□□□□□ -0.55
SS18-202ENST00000269138 FADDQ13158 208 aa11.63□□□□□ -0.55
SS18-202ENST00000269138 MRPL49Q13405 166 aaKnown RBP11.63□□□□□ -0.55
SS18-202ENST00000269138 KLHL26Q53HC5 615 aa11.63□□□□□ -0.55
SS18-202ENST00000269138 PDZK1Q5T2W1 519 aa11.63□□□□□ -0.55
SS18-202ENST00000269138 NANOGP8Q6NSW7 305 aa11.63□□□□□ -0.55
SS18-202ENST00000269138 PLCZ1Q86YW0 608 aa11.63□□□□□ -0.55
SS18-202ENST00000269138 FAM109AQ8N4B1 249 aa11.63□□□□□ -0.55
SS18-202ENST00000269138 CCDC197Q8NCU1 140 aa11.63□□□□□ -0.55
SS18-202ENST00000269138 SLC38A5Q8WUX1 472 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms