RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.32■□□□□ 0.2
TRAM1-201ENST00000262213 PELI2Q9HAT8 420 aa16.32■□□□□ 0.2
TRAM1-201ENST00000262213 SCN2AQ99250 2005 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 COL4A3Q01955 1670 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 A0A0G2JPF8 293 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 HNRNPCL2B2RXH8 293 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 HNRNPCL3B7ZW38 293 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 I3L521 148 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 HNRNPCL4P0DMR1 293 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 ENPP1P22413 925 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 HTR1FP30939 366 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 PITPNBP48739 271 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 CCR6P51684 374 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 TGM3Q08188 693 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 FGFBP1Q14512 234 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 TCEAL5Q5H9L2 206 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 LYPD4Q6UWN0 246 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 ING5Q8WYH8 240 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 DHRS9Q9BPW9 319 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 SLC38A1Q9H2H9 487 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 PIGUQ9H490 435 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 BCL2L10Q9HD36 194 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 CYSLTR2Q9NS75 346 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 ASB6Q9NWX5 421 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 B3GNT2Q9NY97 397 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 CXorf51AA0A1B0GTR3 108 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 A0A1W2PR48 441 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 CASC3O15234 703 aaKnown RBP16.31■□□□□ 0.2
TRAM1-201ENST00000262213 PTBP1P26599 531 aaKnown RBP eCLIP16.31■□□□□ 0.25e-11■■■■■ 44.4
TRAM1-201ENST00000262213 GIFP27352 417 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 BTCP35070 178 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 ACVR1BP36896 505 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 CLCNKAP51800 687 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 RPA4Q13156 261 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 RIN1Q13671 783 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 LTB4RQ15722 352 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 SLC25A35Q3KQZ1 300 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 HBMQ6B0K9 141 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 RPTNQ6XPR3 784 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 SYT9Q86SS6 491 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 LRRTM4Q86VH4 590 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 LRRC28Q86X40 367 aaPredicted RBP16.31■□□□□ 0.2
TRAM1-201ENST00000262213 ZNF680Q8NEM1 530 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 OR9A2Q8NGT5 310 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 OR52N1Q8NH53 320 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 LRRC20Q8TCA0 184 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 HSD17B8Q92506 261 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 MS4A3Q96HJ5 214 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 HCAR1Q9BXC0 346 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 POLMQ9NP87 494 aaPredicted RBP16.31■□□□□ 0.2
TRAM1-201ENST00000262213 ZFP64Q9NPA5 681 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 GLTPQ9NZD2 209 aa16.31■□□□□ 0.2
TRAM1-201ENST00000262213 C5orf42Q9H799 3197 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 A0A0A6YYD5 115 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 TEX13CA0A0J9YWL9 993 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 DAPL1A0PJW8 107 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 MAN2B1O00754 1011 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 TOXO94900 526 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 THY1P04216 161 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 PCCBP05166 539 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 AHCYP23526 432 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 ACSL1P33121 698 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 TEX261Q6UWH6 196 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 ESPNLQ6ZVH7 1005 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 GDF7Q7Z4P5 450 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 CEACAM19Q7Z692 300 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 TRMT10AQ8TBZ6 339 aaKnown RBP16.3■□□□□ 0.2
TRAM1-201ENST00000262213 CAMK1GQ96NX5 476 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 FAIM2Q9BWQ8 316 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 KCNN2Q9H2S1 579 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 NKIRAS2Q9NYR9 191 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 SLC7A7Q9UM01 511 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 ASB4Q9Y574 426 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 U3KQ87 197 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 SCAMP1O15126 338 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 IGHA1P01876 353 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 CSNK1G2P78368 415 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 E2F1Q01094 437 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 SLC9A5Q14940 896 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 ZNF620Q6ZNG0 422 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 ACBD7Q8N6N7 88 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 LINC01555Q8NAE3 123 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 NUP43Q8NFH3 380 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 OR2T33Q8NG76 320 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 OR13C5Q8NGS8 318 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 TTC9Q92623 222 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 COL26A1Q96A83 441 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 ZSWIM3Q96MP5 696 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 LGR4Q9BXB1 951 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 DPH1Q9BZG8 443 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 OR51V1Q9H2C8 321 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 OR51J1Q9H342 316 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 C6orf106Q9H6K1 298 aaPredicted RBP16.3■□□□□ 0.2
TRAM1-201ENST00000262213 EVA1BQ9NVM1 165 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 BABAM2Q9NXR7 383 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 SATB2Q9UPW6 733 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 ENTPD4Q9Y227 616 aa16.3■□□□□ 0.2
TRAM1-201ENST00000262213 EXOGQ9Y2C4 368 aaKnown RBP16.3■□□□□ 0.2
TRAM1-201ENST00000262213 C17orf113A0A1B0GUU1 675 aa16.29■□□□□ 0.2
TRAM1-201ENST00000262213 A0A1W2PPV9 198 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms