RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 AGAP7PQ5VUJ5 663 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 AGAP6Q5VW22 663 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 TMPRSS7Q7RTY8 843 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 SERPINA12Q8IW75 414 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 OR5W2Q8NH69 310 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 TAAR8Q969N4 342 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 FOXN4Q96NZ1 517 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 AGAP4Q96P64 663 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 NUP98P52948 1817 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 A0A087WUU8 490 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 TRAPPC13A5PLN9 417 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 GABRA2P47869 451 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 LTC4SQ16873 150 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 AAK1Q2M2I8 961 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 CNEP1R1Q8N9A8 125 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 TCTEX1D2Q8WW35 142 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 ALG8Q9BVK2 526 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 NPIPA5A0A0B4J1W7 369 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 NPIPA7E9PJI5 369 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 RFPL2O75678 378 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 EPOP01588 193 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 NPIPA8P0DM63 369 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 CERS1P27544 350 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 GPR50Q13585 617 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 GRIN2CQ14957 1233 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 PLCXD3Q63HM9 321 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 TMEM53Q6P2H8 277 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 SDR9C7Q8NEX9 313 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 OR9Q2Q8NGE9 314 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 TRMT2BQ96GJ1 504 aaKnown RBP13.51□□□□□ -0.25
CUX2-201ENST00000261726 MTHFD2LQ9H903 347 aaPredicted RBP13.51□□□□□ -0.25
CUX2-201ENST00000261726 EFCAB7A8K855 629 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 M0R3H8 397 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 GMPRP36959 345 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 FOLR3P41439 243 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 TSFMP43897 325 aaKnown RBP13.5□□□□□ -0.25
CUX2-201ENST00000261726 SMAD2Q15796 467 aaKnown RBP13.5□□□□□ -0.25
CUX2-201ENST00000261726 SLC22A10Q63ZE4 541 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 RSC1A1Q92681 617 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 INPP5KQ9BT40 448 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 SAMD10Q9BYL1 202 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 SACM1LQ9NTJ5 587 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 USP36Q9P275 1121 aaKnown RBP13.5□□□□□ -0.25
CUX2-201ENST00000261726 EEF1A1P68104 462 aaKnown RBP13.5□□□□□ -0.25
CUX2-201ENST00000261726 DSC1Q08554 894 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 FBXW12Q6X9E4 464 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 GPRIN1Q7Z2K8 1008 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 HORMAD2Q8N7B1 307 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 OR9A2Q8NGT5 310 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 RHEBL1Q8TAI7 183 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 MSI2Q96DH6 328 aaKnown RBP13.5□□□□□ -0.25
CUX2-201ENST00000261726 MAGIXQ9H6Y5 334 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 SUSD2Q9UGT4 822 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 ZIC2O95409 532 aaPredicted RBP13.5□□□□□ -0.25
CUX2-201ENST00000261726 ALDOBP05062 364 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 FGFBP1Q14512 234 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 ARHGAP19Q14CB8 494 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 RAB41Q5JT25 222 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 WDR53Q7Z5U6 358 aaPredicted RBP13.5□□□□□ -0.25
CUX2-201ENST00000261726 MS4A15Q8N5U1 240 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 OR2A12Q8NGT7 310 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 MMP28Q9H239 520 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 SIX4Q9UIU6 781 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 RAB3DO95716 219 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 SEMA4FO95754 770 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 PABPC4LP0CB38 370 aaKnown RBP13.5□□□□□ -0.25
CUX2-201ENST00000261726 PRSS56P0CW18 603 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 GAAP10253 952 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 PSMB10P40306 273 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 VIPR2P41587 438 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 ELAVL3Q14576 367 aaKnown RBP13.5□□□□□ -0.25
CUX2-201ENST00000261726 C6orf132Q5T0Z8 1188 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 DPY19L2P1Q6NXN4 242 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 KANSL1Q7Z3B3 1105 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 OR5D16Q8NGK9 328 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 DAZAP1Q96EP5 407 aaKnown RBP13.5□□□□□ -0.25
CUX2-201ENST00000261726 BSCL2Q96G97 398 aaPredicted RBP13.5□□□□□ -0.25
CUX2-201ENST00000261726 C12orf42Q96LP6 360 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 HHATLQ9HCP6 504 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 TXNRD2Q9NNW7 524 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 RABL2AQ9UBK7 228 aaPredicted RBP13.5□□□□□ -0.25
CUX2-201ENST00000261726 RABL2BQ9UNT1 228 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 MEIS3P2A8K0S8 358 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 CEBPZOSA8MTT3 80 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 CBX7O95931 251 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 PPP5CP53041 499 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 PAN3Q58A45 887 aaKnown RBP13.5□□□□□ -0.25
CUX2-201ENST00000261726 SYNPRQ8TBG9 265 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 ITFG2Q969R8 447 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 ELMOD3Q96FG2 381 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 ALOXE3Q9BYJ1 711 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 SLCO3A1Q9UIG8 710 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 C17orf105B2RV13 164 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 ZNF280AP59817 542 aaPredicted RBP13.5□□□□□ -0.25
CUX2-201ENST00000261726 DUS1LQ6P1R4 473 aaKnown RBP13.5□□□□□ -0.25
CUX2-201ENST00000261726 SLC5A8Q8N695 610 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 NDNFQ8TB73 568 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 SFXN5Q8TD22 340 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 ADAMTS18Q8TE60 1221 aa13.5□□□□□ -0.25
CUX2-201ENST00000261726 GPR62Q9BZJ7 368 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms