RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 MST1P26927 711 aa15.39■□□□□ 0.05
SDCBP-201ENST00000260130 S100A3P33764 101 aa15.39■□□□□ 0.05
SDCBP-201ENST00000260130 PIGAP37287 484 aa15.39■□□□□ 0.05
SDCBP-201ENST00000260130 PHC1P78364 1004 aa15.39■□□□□ 0.05
SDCBP-201ENST00000260130 ALDH6A1Q02252 535 aaKnown RBP15.39■□□□□ 0.05
SDCBP-201ENST00000260130 FAM174BQ3ZCQ3 159 aa15.39■□□□□ 0.05
SDCBP-201ENST00000260130 CYP2R1Q6VVX0 501 aa15.39■□□□□ 0.05
SDCBP-201ENST00000260130 NUP54Q7Z3B4 507 aa15.39■□□□□ 0.05
SDCBP-201ENST00000260130 WDR53Q7Z5U6 358 aaPredicted RBP15.39■□□□□ 0.05
SDCBP-201ENST00000260130 ANKFN1Q8N957 763 aa15.39■□□□□ 0.05
SDCBP-201ENST00000260130 DIO2Q92813 273 aa15.39■□□□□ 0.05
SDCBP-201ENST00000260130 TMBIM1Q969X1 311 aa15.39■□□□□ 0.05
SDCBP-201ENST00000260130 ZBTB18Q99592 522 aa15.39■□□□□ 0.05
SDCBP-201ENST00000260130 HOPXQ9BPY8 73 aaPredicted RBP15.39■□□□□ 0.05
SDCBP-201ENST00000260130 LMF2Q9BU23 707 aaKnown RBP15.39■□□□□ 0.05
SDCBP-201ENST00000260130 CXorf36Q9H7Y0 433 aa15.39■□□□□ 0.05
SDCBP-201ENST00000260130 SDR39U1Q9NRG7 319 aaPredicted RBP15.39■□□□□ 0.05
SDCBP-201ENST00000260130 ZCCHC3Q9NUD5 404 aaKnown RBP15.39■□□□□ 0.05
SDCBP-201ENST00000260130 ARMC1Q9NVT9 282 aa15.39■□□□□ 0.05
SDCBP-201ENST00000260130 NDUFAF1Q9Y375 327 aa15.39■□□□□ 0.05
SDCBP-201ENST00000260130 OR10H1Q9Y4A9 318 aa15.39■□□□□ 0.05
SDCBP-201ENST00000260130 RELNP78509 3460 aa15.38■□□□□ 0.05
SDCBP-201ENST00000260130 NBASA2RRP1 2371 aa15.38■□□□□ 0.05
SDCBP-201ENST00000260130 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.38■□□□□ 0.05
SDCBP-201ENST00000260130 A0A0G2JMM0 328 aa15.38■□□□□ 0.05
SDCBP-201ENST00000260130 A0A1W2PPB8 328 aa15.38■□□□□ 0.05
SDCBP-201ENST00000260130 A0A1W2PRS3 328 aa15.38■□□□□ 0.05
SDCBP-201ENST00000260130 KIR3DP1A8MWS1 328 aa15.38■□□□□ 0.05
SDCBP-201ENST00000260130 SCN2BO60939 215 aa15.38■□□□□ 0.05
SDCBP-201ENST00000260130 REM1O75628 298 aa15.38■□□□□ 0.05
SDCBP-201ENST00000260130 BMP2P12643 396 aa15.38■□□□□ 0.05
SDCBP-201ENST00000260130 IL12AP29459 219 aa15.38■□□□□ 0.05
SDCBP-201ENST00000260130 CCT3P49368 545 aaKnown RBP15.38■□□□□ 0.05
SDCBP-201ENST00000260130 SLC7A2P52569 658 aa15.38■□□□□ 0.05
SDCBP-201ENST00000260130 HBA1P69905 142 aa15.38■□□□□ 0.05
SDCBP-201ENST00000260130 RPP38P78345 283 aaKnown RBP15.38■□□□□ 0.05
SDCBP-201ENST00000260130 GAB1Q13480 694 aa15.38■□□□□ 0.05
SDCBP-201ENST00000260130 ZBTB49Q6ZSB9 765 aa15.38■□□□□ 0.05
SDCBP-201ENST00000260130 CLECL1Q8IZS7 167 aa15.38■□□□□ 0.05
SDCBP-201ENST00000260130 GLB1L3Q8NCI6 653 aaPredicted RBP15.38■□□□□ 0.05
SDCBP-201ENST00000260130 OR4N2Q8NGD1 307 aa15.38■□□□□ 0.05
SDCBP-201ENST00000260130 SPPL2AQ8TCT8 520 aa15.38■□□□□ 0.05
SDCBP-201ENST00000260130 GIMAP5Q96F15 307 aa15.38■□□□□ 0.05
SDCBP-201ENST00000260130 MS4A4EQ96PG1 132 aa15.38■□□□□ 0.05
SDCBP-201ENST00000260130 PINLYPA6NC86 204 aa15.38■□□□□ 0.05
SDCBP-201ENST00000260130 SLC22A3O75751 556 aa15.38■□□□□ 0.05
SDCBP-201ENST00000260130 ZNF24P17028 368 aa15.38■□□□□ 0.05
SDCBP-201ENST00000260130 RFC3P40938 356 aa15.38■□□□□ 0.05
SDCBP-201ENST00000260130 DNASE1L1P49184 302 aa15.38■□□□□ 0.05
SDCBP-201ENST00000260130 TDGF1P3P51864 188 aa15.38■□□□□ 0.05
SDCBP-201ENST00000260130 TUBA4AP68366 448 aa15.38■□□□□ 0.05
SDCBP-201ENST00000260130 VPS26BQ4G0F5 336 aa15.38■□□□□ 0.05
SDCBP-201ENST00000260130 CYP27C1Q4G0S4 372 aa15.38■□□□□ 0.05
SDCBP-201ENST00000260130 RNFT1Q5M7Z0 435 aa15.38■□□□□ 0.05
SDCBP-201ENST00000260130 PRAMEF20Q5VT98 475 aa15.38■□□□□ 0.05
SDCBP-201ENST00000260130 PPP4R4Q6NUP7 873 aa15.38■□□□□ 0.05
SDCBP-201ENST00000260130 ZCCHC12Q6PEW1 402 aa15.38■□□□□ 0.05
SDCBP-201ENST00000260130 PACRGLQ8N7B6 248 aa15.38■□□□□ 0.05
SDCBP-201ENST00000260130 CDRT4Q8N9R6 151 aa15.38■□□□□ 0.05
SDCBP-201ENST00000260130 DRAXINQ8NBI3 349 aaPredicted RBP15.38■□□□□ 0.05
SDCBP-201ENST00000260130 ST6GALNAC3Q8NDV1 305 aa15.38■□□□□ 0.05
SDCBP-201ENST00000260130 HOXB13Q92826 284 aaPredicted RBP15.38■□□□□ 0.05
SDCBP-201ENST00000260130 CIB1Q99828 191 aa15.38■□□□□ 0.05
SDCBP-201ENST00000260130 PROK2Q9HC23 129 aa15.38■□□□□ 0.05
SDCBP-201ENST00000260130 Q9N2J8 555 aa15.38■□□□□ 0.05
SDCBP-201ENST00000260130 ZIM2Q9NZV7 527 aa15.38■□□□□ 0.05
SDCBP-201ENST00000260130 CEPT1Q9Y6K0 416 aa15.38■□□□□ 0.05
SDCBP-201ENST00000260130 OR6C70A6NIJ9 312 aa15.37■□□□□ 0.05
SDCBP-201ENST00000260130 AQP12BA6NM10 295 aa15.37■□□□□ 0.05
SDCBP-201ENST00000260130 C9JVG2 144 aa15.37■□□□□ 0.05
SDCBP-201ENST00000260130 H3BNH8 94 aa15.37■□□□□ 0.05
SDCBP-201ENST00000260130 TSPAN2O60636 221 aa15.37■□□□□ 0.05
SDCBP-201ENST00000260130 GNLYP22749 145 aa15.37■□□□□ 0.05
SDCBP-201ENST00000260130 KRT20P35900 424 aa15.37■□□□□ 0.05
SDCBP-201ENST00000260130 MAP3K8P41279 467 aa15.37■□□□□ 0.05
SDCBP-201ENST00000260130 SPDYE7PQ495Y7 208 aa15.37■□□□□ 0.05
SDCBP-201ENST00000260130 TBCELQ5QJ74 424 aa15.37■□□□□ 0.05
SDCBP-201ENST00000260130 HMBOX1Q6NT76 420 aa15.37■□□□□ 0.05
SDCBP-201ENST00000260130 MFSD12Q6NUT3 480 aa15.37■□□□□ 0.05
SDCBP-201ENST00000260130 ANKRD46Q86W74 232 aa15.37■□□□□ 0.05
SDCBP-201ENST00000260130 AQP12AQ8IXF9 295 aa15.37■□□□□ 0.05
SDCBP-201ENST00000260130 OR9I1Q8NGQ6 314 aa15.37■□□□□ 0.05
SDCBP-201ENST00000260130 FAM81AQ8TBF8 368 aa15.37■□□□□ 0.05
SDCBP-201ENST00000260130 HGDQ93099 445 aa15.37■□□□□ 0.05
SDCBP-201ENST00000260130 MOAP1Q96BY2 351 aa15.37■□□□□ 0.05
SDCBP-201ENST00000260130 RMND5BQ96G75 393 aaPredicted RBP15.37■□□□□ 0.05
SDCBP-201ENST00000260130 SLC35A4Q96G79 324 aa15.37■□□□□ 0.05
SDCBP-201ENST00000260130 COL21A1Q96P44 957 aa15.37■□□□□ 0.05
SDCBP-201ENST00000260130 ADOQ96SZ5 270 aa15.37■□□□□ 0.05
SDCBP-201ENST00000260130 ANKRD60Q9BZ19 345 aa15.37■□□□□ 0.05
SDCBP-201ENST00000260130 FAM120CQ9NX05 1096 aaKnown RBP15.37■□□□□ 0.05
SDCBP-201ENST00000260130 CBLCQ9ULV8 474 aa15.37■□□□□ 0.05
SDCBP-201ENST00000260130 HELZ2Q9BYK8 2649 aaKnown RBP15.37■□□□□ 0.05
SDCBP-201ENST00000260130 FASNP49327 2511 aaKnown RBP15.37■□□□□ 0.05
SDCBP-201ENST00000260130 ANKUB1A6NFN9 424 aa15.36■□□□□ 0.05
SDCBP-201ENST00000260130 HNRNPRO43390 633 aaKnown RBP15.36■□□□□ 0.05
SDCBP-201ENST00000260130 ABCB7O75027 752 aa15.36■□□□□ 0.05
SDCBP-201ENST00000260130 UGT2B11O75310 529 aa15.36■□□□□ 0.05
SDCBP-201ENST00000260130 PGRP06401 933 aa15.36■□□□□ 0.05
SDCBP-201ENST00000260130 CDH2P19022 906 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms