RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 AGR3Q8TD06 166 aa17.14■□□□□ 0.33
TM6SF1-201ENST00000258909 DACH2Q96NX9 599 aa17.14■□□□□ 0.33
TM6SF1-201ENST00000258909 MECRQ9BV79 373 aa17.14■□□□□ 0.33
TM6SF1-201ENST00000258909 IQCGQ9H095 443 aaKnown RBP17.14■□□□□ 0.33
TM6SF1-201ENST00000258909 PLEKHF2Q9H8W4 249 aa17.14■□□□□ 0.33
TM6SF1-201ENST00000258909 MID2Q9UJV3 735 aa17.14■□□□□ 0.33
TM6SF1-201ENST00000258909 EDARQ9UNE0 448 aa17.14■□□□□ 0.33
TM6SF1-201ENST00000258909 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.13■□□□□ 0.33
TM6SF1-201ENST00000258909 A0A1W2PPR1 153 aa17.13■□□□□ 0.33
TM6SF1-201ENST00000258909 LSM1O15116 133 aaKnown RBP17.13■□□□□ 0.33
TM6SF1-201ENST00000258909 NKX2-2O95096 273 aa17.13■□□□□ 0.33
TM6SF1-201ENST00000258909 CHEK2O96017 543 aa17.13■□□□□ 0.33
TM6SF1-201ENST00000258909 HRGP04196 525 aa17.13■□□□□ 0.33
TM6SF1-201ENST00000258909 ACP2P11117 423 aa17.13■□□□□ 0.33
TM6SF1-201ENST00000258909 KLK2P20151 261 aa17.13■□□□□ 0.33
TM6SF1-201ENST00000258909 KEAP1Q14145 624 aa17.13■□□□□ 0.33
TM6SF1-201ENST00000258909 FIGNL1Q6PIW4 674 aa17.13■□□□□ 0.33
TM6SF1-201ENST00000258909 BTLAQ7Z6A9 289 aa17.13■□□□□ 0.33
TM6SF1-201ENST00000258909 BANPQ8N9N5 519 aa17.13■□□□□ 0.33
TM6SF1-201ENST00000258909 GATSQ8NAP1 163 aa17.13■□□□□ 0.33
TM6SF1-201ENST00000258909 OR4C3Q8NH37 302 aa17.13■□□□□ 0.33
TM6SF1-201ENST00000258909 FNDC9Q8TBE3 224 aa17.13■□□□□ 0.33
TM6SF1-201ENST00000258909 GIMAP5Q96F15 307 aa17.13■□□□□ 0.33
TM6SF1-201ENST00000258909 C16orf58Q96GQ5 468 aa17.13■□□□□ 0.33
TM6SF1-201ENST00000258909 APOPT1Q96IL0 206 aa17.13■□□□□ 0.33
TM6SF1-201ENST00000258909 FAM111AQ96PZ2 611 aa17.13■□□□□ 0.33
TM6SF1-201ENST00000258909 PIGQQ9BRB3 760 aa17.13■□□□□ 0.33
TM6SF1-201ENST00000258909 OPN3Q9H1Y3 402 aaPredicted RBP17.13■□□□□ 0.33
TM6SF1-201ENST00000258909 SLC17A7Q9P2U7 560 aa17.13■□□□□ 0.33
TM6SF1-201ENST00000258909 VDAC3Q9Y277 283 aa17.13■□□□□ 0.33
TM6SF1-201ENST00000258909 PIP5K1BO14986 540 aa17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 SPAG7O75391 227 aa17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 ATE1O95260 518 aa17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 RAF1P04049 648 aa17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 NEFHP12036 1026 aa17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 MAP3K8P41279 467 aa17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 KIR2DL2P43627 348 aaPredicted RBP17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 EEFSECP57772 596 aaKnown RBP17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 PPP2R2AP63151 447 aa17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 PRR5P85299 388 aa17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 C17orf67Q0P5P2 114 aa17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 PON3Q15166 354 aa17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 ARL13AQ5H913 290 aaPredicted RBP17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 OR2A2Q6IF42 318 aa17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 ZCCHC23Q6ZST2 131 aa17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 ZAR1Q86SH2 424 aa17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 SLC16A11Q8NCK7 471 aa17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 ZFP28Q8NHY6 868 aa17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 TWIST2Q8WVJ9 160 aa17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 ZBED6CLQ96FA7 236 aaPredicted RBP17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 PGM2Q96G03 612 aa17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 TRMOQ9BU70 441 aa17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 ANKZF1Q9H8Y5 726 aa17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 L2HGDHQ9H9P8 463 aa17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 FBXO34Q9NWN3 711 aa17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 TRAF6Q9Y4K3 522 aa17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 MSTNO14793 375 aa17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 CASKO14936 926 aa17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 TBX19O60806 448 aa17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 TNFRSF21O75509 655 aa17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 IFI6P09912 130 aa17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 BCKDHAP12694 445 aa17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 FRKP42685 505 aaPredicted RBP17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 EEF1A1P68104 462 aaKnown RBP17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 FOXD4Q12950 439 aaPredicted RBP17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 PDE7AQ13946 482 aa17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 DUSP5Q16690 384 aa17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 UGT3A2Q3SY77 523 aa17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 VPS26BQ4G0F5 336 aa17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 EEF1A1P5Q5VTE0 462 aa17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 PPP4R4Q6NUP7 873 aa17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 ZNF474Q6S9Z5 364 aaPredicted RBP17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 TRABD2AQ86V40 505 aa17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 CDRT4Q8N9R6 151 aa17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 CEP70Q8NHQ1 597 aa17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 HOXB13Q92826 284 aaPredicted RBP17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 ZNF764Q96H86 408 aaPredicted RBP17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 ALPK1Q96QP1 1244 aa17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 NPAS1Q99742 590 aa17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 KLHL28Q9NXS3 571 aa17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 C6orf203Q9P0P8 240 aaPredicted RBP17.12■□□□□ 0.33
TM6SF1-201ENST00000258909 NUP214P35658 2090 aaPredicted RBP17.11■□□□□ 0.33
TM6SF1-201ENST00000258909 IGLV3-32A0A0A0MS00 114 aa17.11■□□□□ 0.33
TM6SF1-201ENST00000258909 TTC36A6NLP5 189 aa17.11■□□□□ 0.33
TM6SF1-201ENST00000258909 KCNK2O95069 426 aa17.11■□□□□ 0.33
TM6SF1-201ENST00000258909 OXSR1O95747 527 aaPredicted RBP17.11■□□□□ 0.33
TM6SF1-201ENST00000258909 OPN1LWP04000 364 aa17.11■□□□□ 0.33
TM6SF1-201ENST00000258909 CRHP06850 196 aa17.11■□□□□ 0.33
TM6SF1-201ENST00000258909 SGCBQ16585 318 aa17.11■□□□□ 0.33
TM6SF1-201ENST00000258909 CCNJQ5T5M9 372 aa17.11■□□□□ 0.33
TM6SF1-201ENST00000258909 RNF165Q6ZSG1 346 aa17.11■□□□□ 0.33
TM6SF1-201ENST00000258909 NUDT8Q8WV74 236 aa17.11■□□□□ 0.33
TM6SF1-201ENST00000258909 JADE3Q92613 823 aa17.11■□□□□ 0.33
TM6SF1-201ENST00000258909 MBD6Q96DN6 1003 aa17.11■□□□□ 0.33
TM6SF1-201ENST00000258909 WFIKKN1Q96NZ8 548 aa17.11■□□□□ 0.33
TM6SF1-201ENST00000258909 MS4A4EQ96PG1 132 aa17.11■□□□□ 0.33
TM6SF1-201ENST00000258909 MKS1Q9NXB0 559 aa17.11■□□□□ 0.33
TM6SF1-201ENST00000258909 NDRG3Q9UGV2 375 aa17.11■□□□□ 0.33
TM6SF1-201ENST00000258909 TMED5Q9Y3A6 229 aa17.11■□□□□ 0.33
TM6SF1-201ENST00000258909 TESMINQ9Y4I5 508 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms